; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023407 (gene) of Chayote v1 genome

Gene IDSed0023407
OrganismSechium edule (Chayote v1)
Descriptionupstream activation factor subunit spp27-like
Genome locationLG05:42880168..42886572
RNA-Seq ExpressionSed0023407
SyntenySed0023407
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035260.1 UAF30 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-13178.68Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK-------DADEILTLEIEDDGTEDVCNDGDDDAESKTSS
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEEDF++DLSDKKQFIREQVDLFL  EHQ+       D DE+   + ED  + D  N  D D +SKT S
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK-------DADEILTLEIEDDGTEDVCNDGDDDAESKTSS

Query:  NDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAK
        N++GKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL+SNDV PAK
Subjt:  NDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAK

Query:  SSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQDPSDKRR
        SSQ EKQ          QKE+PQKK+R KQ K+EDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDY+K NNLQDPSDKRR
Subjt:  SSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQDPSDKRR

Query:  IICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        IICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  IICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

XP_022947277.1 upstream activation factor subunit UAF30-like isoform X1 [Cucurbita moschata]8.9e-13377.65Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEEDF++DLSDKKQFIREQVDLFL  EHQ+              D D+   +E ED  + D  N  DDD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD

Query:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS
         +SKT SN++GKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL+S
Subjt:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS

Query:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ
        NDV PAKSSQKEKQ          QKE+PQKK+R KQ K+EDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDY+K NNLQ
Subjt:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ

Query:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        DPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

XP_022947278.1 upstream activation factor subunit UAF30-like isoform X2 [Cucurbita moschata]1.7e-13177.65Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEEDF++DLSDKKQFIREQVDLFL  EHQ+              D D+   +E ED  + D  N  DDD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD

Query:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS
         +SKT SN++GKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL+S
Subjt:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS

Query:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ
        NDV PAKSSQKEKQ          QKE+PQKK+R KQ  KEDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDY+K NNLQ
Subjt:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ

Query:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        DPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

XP_023007205.1 upstream activation factor subunit UAF30-like isoform X1 [Cucurbita maxima]9.6e-13578.59Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEED+++DLSDKKQFIREQVDLFL  EHQ+               D D+   +E ED G+ED  N  DD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD

Query:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD
        D +SKT SN+IGKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL+
Subjt:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD

Query:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL
        SNDV PAKSSQKEKQ          QKE+PQKK+R KQ K+EDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDYIK NNL
Subjt:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL

Query:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        QDPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

XP_023007206.1 upstream activation factor subunit UAF30-like isoform X2 [Cucurbita maxima]1.8e-13378.59Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEED+++DLSDKKQFIREQVDLFL  EHQ+               D D+   +E ED G+ED  N  DD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD

Query:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD
        D +SKT SN+IGKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL+
Subjt:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD

Query:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL
        SNDV PAKSSQKEKQ          QKE+PQKK+R KQ  KEDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDYIK NNL
Subjt:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL

Query:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        QDPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

TrEMBL top hitse value%identityAlignment
A0A0A0LJW7 Uncharacterized protein4.2e-12875.52Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD
        MVSDSELI RLR+FLRNSDLNTTTT IVRR+LEEDF +DLSDKK FIREQVDLFL+ EH+K               D DE L +E ED  +ED  ND +D
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD

Query:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD
        D + KTSS    ++VKKRGGGFTK CSLSP LQEF+G PEMARTEVVKQLWNHIRE NLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL+
Subjt:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD

Query:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL
        SNDVIPAKSSQKEK +KE Q KEKPQK+R       KQ K+EDSDDS RE+KRQKKGKSGFLAPL LS+ALV FLGTGE+ L RS+VVKRMWDYIK NNL
Subjt:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL

Query:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVK
        QDPSDKRRIICDE+LKELF+VDSF+GFTVSKLL  H +K
Subjt:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVK

A0A6J1G606 upstream activation factor subunit UAF30-like isoform X14.3e-13377.65Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEEDF++DLSDKKQFIREQVDLFL  EHQ+              D D+   +E ED  + D  N  DDD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD

Query:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS
         +SKT SN++GKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL+S
Subjt:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS

Query:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ
        NDV PAKSSQKEKQ          QKE+PQKK+R KQ K+EDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDY+K NNLQ
Subjt:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ

Query:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        DPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

A0A6J1G661 upstream activation factor subunit UAF30-like isoform X28.2e-13277.65Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEEDF++DLSDKKQFIREQVDLFL  EHQ+              D D+   +E ED  + D  N  DDD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK--------------DADEILTLEIEDDGTEDVCNDGDDD

Query:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS
         +SKT SN++GKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPL+S
Subjt:  AESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDS

Query:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ
        NDV PAKSSQKEKQ          QKE+PQKK+R KQ  KEDSDDS RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDY+K NNLQ
Subjt:  NDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ

Query:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        DPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

A0A6J1KZW6 upstream activation factor subunit UAF30-like isoform X28.7e-13478.59Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEED+++DLSDKKQFIREQVDLFL  EHQ+               D D+   +E ED G+ED  N  DD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD

Query:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD
        D +SKT SN+IGKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL+
Subjt:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD

Query:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL
        SNDV PAKSSQKEKQ          QKE+PQKK+R KQ  KEDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDYIK NNL
Subjt:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL

Query:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        QDPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

A0A6J1L2C3 upstream activation factor subunit UAF30-like isoform X14.6e-13578.59Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD
        MVSDSELI RLRE LRNSDLNTTTT IVRR+LEED+++DLSDKKQFIREQVDLFL  EHQ+               D D+   +E ED G+ED  N  DD
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQK---------------DADEILTLEIEDDGTEDVCNDGDD

Query:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD
        D +SKT SN+IGKEVKKRGGGF+K CSLSP LQEF+GVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL+
Subjt:  DAESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD

Query:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL
        SNDV PAKSSQKEKQ          QKE+PQKK+R KQ K+EDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN LSRSEVVKRMWDYIK NNL
Subjt:  SNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNL

Query:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        QDPSDKRRIICDEKLKELF+VDSF+GFTVSKLL  H VKKT
Subjt:  QDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp276.2e-1230.3Show/hide
Query:  LREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQV-DLFLEA---------EHQKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSNDIGKEV
        +++ L   D  T +   VR+ LEE   VDLS  K+ +   +   F E          E Q  A +       ++GTE+         + K    + GK  
Subjt:  LREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQV-DLFLEA---------EHQKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSNDIGKEV

Query:  KKR---GGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAKSSQK
        + +        KP  LSP L EF+G+ +++R + VK+LW +I+  +LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  +D +P      
Subjt:  KKR---GGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAKSSQK

Query:  EKQEKEIQQKEKPQKERPQKKQRL-KQEKKE
                 K +P+ E P     L KQE+KE
Subjt:  EKQEKEIQQKEKPQKERPQKKQRL-KQEKKE

Q05024 Protein TRI19.6e-1329.32Show/hide
Query:  VRRQLEEDFAVDLSDKKQFIREQV-DLFLEAEH------------QKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSNDIGKEVKKRGGGFTKPCSLS
        VR+ L+  ++V+L  +++ I E + + F + +              +D +  L L+ E++            +ESK+       +         +   LS
Subjt:  VRRQLEEDFAVDLSDKKQFIREQV-DLFLEAEH------------QKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSNDIGKEVKKRGGGFTKPCSLS

Query:  PLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAKSSQKEKQEKEIQ
          LQ+F+G  E+ RT+VVK +W +I+E +LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++  + ++++  +  QK+  EKEI+
Subjt:  PLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAKSSQKEKQEKEIQ

Q08747 Upstream activation factor subunit UAF302.4e-1634.39Show/hide
Query:  SELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDK----KQFIREQVDLFLE-AEHQKDADEIL----TLEIEDDGTEDVCNDGDDDAESKTSSND
        S +ID L   L + DL T TT  VR  L+E +A+D+  +     + IR+ +DL  E    ++  +++L    TL IE   T+++        E K  S  
Subjt:  SELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDK----KQFIREQVDLFLE-AEHQKDADEIL----TLEIEDDGTEDVCNDGDDDAESKTSSND

Query:  IGKEVKKRGGGF------TKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDV
         G  V+K+ G        T+  +LS  L   +G  E+ RTEVV++LW +I+  NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+ H+        
Subjt:  IGKEVKKRGGGF------TKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDV

Query:  IPAKSSQKEKQEKEIQQKEKP
         P K S      +E+++KEKP
Subjt:  IPAKSSQKEKQEKEIQQKEKP

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein7.4e-6946.43Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSND---IG
        MVSDS+L+ +LRE LR+SDL TTT   VRRQLE  F V+L+DKK F+REQ+D FLE++          LE + +  E+ CN   +D E   + +D   + 
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSND---IG

Query:  KEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSND---------
         + KKRGGGF K C LSP L++F+G  ++ARTEVVK++W +IRE +LQDP+NRRNILCDE L +LF V +INMFQMNKAL+KHIW L+  D         
Subjt:  KEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSND---------

Query:  VIPAKSSQKEKQEKEIQQ--KEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ
         +   S ++++++ +I++  +   ++ R ++ + +++ K++    +  EEK +KKG  GF     LS  L  F  TG  +L+R+EVVK +W YIK NNLQ
Subjt:  VIPAKSSQKEKQEKEIQQ--KEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQ

Query:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHL
        DPSDKR IICDE L+ LF V+S + F ++K L  H+
Subjt:  DPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHL

AT2G14880.1 SWIB/MDM2 domain superfamily protein5.2e-1439.78Show/hide
Query:  SKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        S T S++     K+   G  KP  +SP +Q+ V +PE+ART+ +K++W +I+E +LQDP N+R ILCDE LK +F G + +   ++ K +  H
Subjt:  SKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH

AT3G19080.1 SWIB complex BAF60b domain-containing protein2.0e-6639.52Show/hide
Query:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEA-------------EHQKDADEILTLEIEDDGTEDVCNDGDDDA
        MVSD +L+ RLRE L +SDLNT T   VRRQLE DF VDL+DKK +IR+Q+D FLE+             E   +ADEI   EIE    ED+  DG    
Subjt:  MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEA-------------EHQKDADEILTLEIEDDGTEDVCNDGDDDA

Query:  ESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD--
        E K    +   + KKRGGG TK   LSP L++ VG  ++ RTEVVK++W +IREK+LQDP +RR I+CDE L +LF V +INMFQMNKAL+KHIWPL   
Subjt:  ESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLD--

Query:  ---SNDVIP--------------------AKSSQKEKQEKEIQQKEKPQKERPQK---------------------------------------------
           +NDV                       ++ ++E +E+E++   K ++++P K                                             
Subjt:  ---SNDVIP--------------------AKSSQKEKQEKEIQQKEKPQKERPQK---------------------------------------------

Query:  -----------------------------------KQRLK---------------------QEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLG
                                           KQ  K                     ++K E   DS    ++ KK K   LAPL LSDALV FLG
Subjt:  -----------------------------------KQRLK---------------------QEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLG

Query:  TGENELSRSEVVKRMWDYIKNNNLQDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVK
         GEN LSR++VVKR+W+YI +N+LQDPSDKRR+ICDEKLKELFEVDSF   +VSKLL  H +K
Subjt:  TGENELSRSEVVKRMWDYIKNNNLQDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVK

AT4G22360.1 SWIB complex BAF60b domain-containing protein4.9e-3635.56Show/hide
Query:  ESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSN
        ++   S   G + K   GG  K C +SP L+  VG P + RTE+V+QLW +IR+ NLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+KHI PLD  
Subjt:  ESKTSSNDIGKEVKKRGGGFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSN

Query:  DVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQD
           P+K S                           Q KK  ++   + E  +    +   + + LS+ L  F GTGE E++  E+++R+W+YIK NNL+D
Subjt:  DVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQRLKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQD

Query:  PSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT
        P +   I CDEKL++L   +S     ++++L  H+ K++
Subjt:  PSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT

AT4G34290.1 SWIB/MDM2 domain superfamily protein8.9e-1443.42Show/hide
Query:  GFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        G  KP  +S  +Q+ VGVPE+ RT+ +K++W +I+E +LQDP N+R+ILCDE LK +F G   +   ++ K +  H
Subjt:  GFTKPCSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGACTCGGAGCTCATTGACCGGCTCCGAGAATTTCTCCGTAATTCCGACCTAAATACCACCACCACCGGCATCGTCCGCCGCCAGCTCGAGGAGGACTTCGC
CGTCGATTTGTCCGACAAGAAGCAGTTTATCAGGGAACAGGTGGACTTGTTCCTCGAGGCCGAGCACCAGAAAGACGCCGATGAAATTTTGACCCTGGAAATAGAGGATG
ATGGTACTGAAGATGTATGTAACGATGGCGATGATGATGCAGAGAGTAAAACGAGCTCTAACGATATTGGTAAAGAGGTGAAGAAAAGAGGGGGTGGTTTTACCAAGCCA
TGTAGCCTTTCCCCCCTACTGCAGGAATTTGTGGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGAATCACATTAGGGAGAAGAATTTGCAAGACCC
CAGTAATAGGAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTCTTTCAAAGCATATTTGGCCGT
TGGATTCAAATGATGTTATTCCAGCCAAATCAAGCCAGAAGGAAAAGCAGGAAAAGGAGATTCAGCAAAAGGAGAAGCCACAGAAAGAGAGGCCACAGAAGAAGCAGCGG
CTGAAGCAAGAAAAAAAAGAAGATTCTGATGACTCGGGTAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGCTTTCTTGCTCCTCTTCAACTTTCGGATGCTCTGGT
GACATTTCTTGGTACCGGAGAGAATGAATTGTCTCGCTCGGAAGTAGTGAAAAGAATGTGGGATTACATAAAGAATAACAACCTTCAGGATCCTTCGGACAAAAGGAGAA
TAATCTGCGACGAGAAGCTTAAAGAACTCTTTGAAGTCGATTCGTTTCATGGCTTCACTGTTTCGAAACTCCTGGTACCTCATTTGGTAAAAAAGACATAA
mRNA sequenceShow/hide mRNA sequence
AGCAGTTACTAAAAAAAAAAAAATTAGGAAAAAGAAAGTTAAGAAAGAATTAATTTCCAAAATTGTCCCTTCTTCATCCCCAATCTCCTCTCTGTGGTCCAATCTTTCCT
CTTCCAAACCCAAACTTCAAAACCTAACCAACAAAGCATCTACTCCATTACACTCCTCTTTGATTCTGCAAAGGATTTGCCATTTCATCCATCCAAGATTCTCGATTTCA
TCCATGGTTTCTGACTCGGAGCTCATTGACCGGCTCCGAGAATTTCTCCGTAATTCCGACCTAAATACCACCACCACCGGCATCGTCCGCCGCCAGCTCGAGGAGGACTT
CGCCGTCGATTTGTCCGACAAGAAGCAGTTTATCAGGGAACAGGTGGACTTGTTCCTCGAGGCCGAGCACCAGAAAGACGCCGATGAAATTTTGACCCTGGAAATAGAGG
ATGATGGTACTGAAGATGTATGTAACGATGGCGATGATGATGCAGAGAGTAAAACGAGCTCTAACGATATTGGTAAAGAGGTGAAGAAAAGAGGGGGTGGTTTTACCAAG
CCATGTAGCCTTTCCCCCCTACTGCAGGAATTTGTGGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGAATCACATTAGGGAGAAGAATTTGCAAGA
CCCCAGTAATAGGAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTCTTTCAAAGCATATTTGGC
CGTTGGATTCAAATGATGTTATTCCAGCCAAATCAAGCCAGAAGGAAAAGCAGGAAAAGGAGATTCAGCAAAAGGAGAAGCCACAGAAAGAGAGGCCACAGAAGAAGCAG
CGGCTGAAGCAAGAAAAAAAAGAAGATTCTGATGACTCGGGTAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGCTTTCTTGCTCCTCTTCAACTTTCGGATGCTCT
GGTGACATTTCTTGGTACCGGAGAGAATGAATTGTCTCGCTCGGAAGTAGTGAAAAGAATGTGGGATTACATAAAGAATAACAACCTTCAGGATCCTTCGGACAAAAGGA
GAATAATCTGCGACGAGAAGCTTAAAGAACTCTTTGAAGTCGATTCGTTTCATGGCTTCACTGTTTCGAAACTCCTGGTACCTCATTTGGTAAAAAAGACATAATAGCGA
GTTTCTCCTACACATTGTCTTTGTTGATGCTAGAGAATCTGGAATTTTTGTTTTCTTTCTGTATTGTTCTCTGGAATTCACCAACAAGGCAATGGAAATTCTGTTTGTTG
ACC
Protein sequenceShow/hide protein sequence
MVSDSELIDRLREFLRNSDLNTTTTGIVRRQLEEDFAVDLSDKKQFIREQVDLFLEAEHQKDADEILTLEIEDDGTEDVCNDGDDDAESKTSSNDIGKEVKKRGGGFTKP
CSLSPLLQEFVGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLDSNDVIPAKSSQKEKQEKEIQQKEKPQKERPQKKQR
LKQEKKEDSDDSGREEKRQKKGKSGFLAPLQLSDALVTFLGTGENELSRSEVVKRMWDYIKNNNLQDPSDKRRIICDEKLKELFEVDSFHGFTVSKLLVPHLVKKT