| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU32278.1 hypothetical protein TSUD_62940 [Trifolium subterraneum] | 5.0e-62 | 43.09 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
+S A++PL +WD AF TA+HLINRL T L+ P LF + PDY+ L VFG CFP +RPY K DFRS C FLGYS+ HKGYKCL G++YVS+
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGAND---IAPITSVI
+++F+E F + + +P ++ S T IP+ + P + ++++ T + ++ ++SP + P+QP HS SN +D ++P +
Subjt: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGAND---IAPITSVI
Query: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
P N HPMQTR KSG+ PK EP K AL+ W AM +E++ L +NKTWTLV P N+ V+GCKWVF+ K++ DGTI +YKARLVA
Subjt: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
Query: KGFHQTLDVNF
KGFHQ +F
Subjt: KGFHQTLDVNF
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| KAG8473223.1 hypothetical protein CXB51_035172 [Gossypium anomalum] | 9.1e-64 | 44.38 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
++ A +PL FW AF +A++LINRL T VL G SP + L P Y L +FG +C+PYLRP+ KL RS+PC FLGYSS+HKGYKC+D+ GKL+VSR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFATKGHSPKTTSKSVVTSS--------IPILSQP----PQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGAN
+++FDE F FAT SP +S S +TSS +P++ P S+ S S P ++ S + SS +S P++ + + S+
Subjt: NILFDELTFSFATKGHSPKTTSKSVVTSS--------IPILSQP----PQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGAN
Query: DIAPITSVIPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTI
P+ IP P VN HPMQTR KSGIF+P+ + S EP + AL W A Q E+D L++N+TW LV P N + VGCKWVFK+K+H+DG+I
Subjt: DIAPITSVIPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTI
Query: ARYKARLVAKGFHQTLDVNF
ARYK RLV KG+ Q ++F
Subjt: ARYKARLVAKGFHQTLDVNF
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| KAG8479334.1 hypothetical protein CXB51_029681 [Gossypium anomalum] | 1.3e-62 | 42.37 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
++ AS+P+++W DAF+TA++++NRL T L GVSP ++LF PDY QL VFG C+P LRPY KL +RS PCTFLGY++ H+GYKC+D G++Y+SR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSL---QSNGANDIAPITSVI
++ FDE T+ FA SKSVV S P S Q + + + + + + SSP+ S+P S DT + SN + +A I
Subjt: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSL---QSNGANDIAPITSVI
Query: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
++N HPM TR K GI++PK ++ D +EP A+ W++A+ DE L++N+TW LVS P+NQ +VGCKW+FK+K++SDG++AR K RLVA
Subjt: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
Query: KGFHQT--LDVNFFFRLLARL
+GF Q LD + F L+ ++
Subjt: KGFHQT--LDVNFFFRLLARL
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| KAG8502419.1 hypothetical protein CXB51_000456 [Gossypium anomalum] | 7.7e-63 | 44.59 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
++HASMPL++W+DAF+T I+LINRL + L + P +KLF P Y L VFG CFP LRPY KL FRS PCTFLGYSS+HKGY+CL +GK+YVSR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSS--SQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTH--SLQSNGANDIAPITSV
++ F E TF F T +PK+T+ V++ + +LS +S+ SQS+ PN +V+ ++ +S P+ S TH S + ++ T
Subjt: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSS--SQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTH--SLQSNGANDIAPITSV
Query: IPCPIVNAHPMQTRGKSGIFRPKALIS--KTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKAR
+P +N+HPM TRGK+ IF+PK +S P + A++ HW+ + +E L+ N TW+L + P N+K +GCKW+FKVKK +DGTI RYKAR
Subjt: IPCPIVNAHPMQTRGKSGIFRPKALIS--KTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKAR
Query: LVAKGFHQTLDVNF
LVAKGF Q ++F
Subjt: LVAKGFHQTLDVNF
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| TYK18915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.3e-64 | 45.59 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
+S A++PL+FWD+AFST+++LIN L TPVL +SPL+K+F R P++ L VFG KC+PYLRPY KL RS PCTFLGYS+ HKGYKCL +G+L++SR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFAT-KGHSPKTTSKSVVTSSIPILSQPPQS-------------SSQSLSTLQPPNVSVNDSSTLQ------NSSPLLSSP-PSQPVASDT
++LFDE +F +A+ HS SK+V+ S P+ S P S S + L P V ++ T + NS + SP P +P
Subjt: NILFDELTFSFAT-KGHSPKTTSKSVVTSSIPILSQPPQS-------------SSQSLSTLQPPNVSVNDSSTLQ------NSSPLLSSP-PSQPVASDT
Query: HSLQSNGANDIAPITSVIPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFK
H S G N TS+ HPM T+ K IF+PKA + Y + E NAK A HW+KAM++E+ L +N TW+L+ + NQK+VGCKWVFK
Subjt: HSLQSNGANDIAPITSVIPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFK
Query: VKKHSDGTIARYKARLVAKGFHQTLDVNF
+K++S G+I+RYKARLVAKGFHQT ++++
Subjt: VKKHSDGTIARYKARLVAKGFHQTLDVNF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3NHD4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) | 4.1e-62 | 45.02 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
+S AS+PL++WD AF TA++LINRL + L P LF + PDY L VFG CFP LRPY KLD+RS C FLGYS HKGY+CL NG+L++S+
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFA---TKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSVI
+++F+E F F T HS + S VT S P++ P S S + S P+ S+ +S SSP++S P+ P + SL A I P +
Subjt: NILFDELTFSFA---TKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSVI
Query: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
N HPM TR K G +P+ IEP + K AL+ W+ AMQ EYD L+ N TWTLV P ++ +GCKWVF+VK++SDGT+ +YKARLVA
Subjt: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
Query: KGFHQTLDVNF
KGFHQ ++F
Subjt: KGFHQTLDVNF
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| A0A2Z6MJI3 Integrase catalytic domain-containing protein | 2.4e-62 | 43.09 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
+S A++PL +WD AF TA+HLINRL T L+ P LF + PDY+ L VFG CFP +RPY K DFRS C FLGYS+ HKGYKCL G++YVS+
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGAND---IAPITSVI
+++F+E F + + +P ++ S T IP+ + P + ++++ T + ++ ++SP + P+QP HS SN +D ++P +
Subjt: NILFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGAND---IAPITSVI
Query: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
P N HPMQTR KSG+ PK EP K AL+ W AM +E++ L +NKTWTLV P N+ V+GCKWVF+ K++ DGTI +YKARLVA
Subjt: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
Query: KGFHQTLDVNF
KGFHQ +F
Subjt: KGFHQTLDVNF
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| A0A438H844 Retrovirus-related Pol polyprotein from transposon RE1 | 3.1e-62 | 45.83 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
++ AS+P +WD+AF T+++LINRL TPVL SPL+ LF + P YSQL VFG C+P LRP+ KL FRS PCTFLGYS HKGYKCL NG + +SR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFATKGHSPKTTSK-SVVTSSIPILSQPP---QSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSV
+++FDE F FA + +TTS S ++S+P + P SS S ST P N S+ +++ N + SQP P +S
Subjt: NILFDELTFSFATKGHSPKTTSK-SVVTSSIPILSQPP---QSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSV
Query: IPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLV
P P +H M TR K+GIF+PKA + T P + AL+ +HW++AM DEY L++N TW LV P ++K++G KWVFKVK++ DGTI +YKARLV
Subjt: IPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLV
Query: AKGFHQTLDVNF
AKGFHQ + +F
Subjt: AKGFHQTLDVNF
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| A0A5D3D5W0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-64 | 45.59 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
+S A++PL+FWD+AFST+++LIN L TPVL +SPL+K+F R P++ L VFG KC+PYLRPY KL RS PCTFLGYS+ HKGYKCL +G+L++SR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFAT-KGHSPKTTSKSVVTSSIPILSQPPQS-------------SSQSLSTLQPPNVSVNDSSTLQ------NSSPLLSSP-PSQPVASDT
++LFDE +F +A+ HS SK+V+ S P+ S P S S + L P V ++ T + NS + SP P +P
Subjt: NILFDELTFSFAT-KGHSPKTTSKSVVTSSIPILSQPPQS-------------SSQSLSTLQPPNVSVNDSSTLQ------NSSPLLSSP-PSQPVASDT
Query: HSLQSNGANDIAPITSVIPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFK
H S G N TS+ HPM T+ K IF+PKA + Y + E NAK A HW+KAM++E+ L +N TW+L+ + NQK+VGCKWVFK
Subjt: HSLQSNGANDIAPITSVIPCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFK
Query: VKKHSDGTIARYKARLVAKGFHQTLDVNF
+K++S G+I+RYKARLVAKGFHQT ++++
Subjt: VKKHSDGTIARYKARLVAKGFHQTLDVNF
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| A0A803NRU8 Uncharacterized protein | 2.4e-62 | 45.66 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
++ ASMPL FWD+AF A++L NRL TPVL+ +SP++ LF+ PDY L +FG CFP +RPY KLDFRS PCTFLG S HKGYKCLD +G+LY+SR
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLDENGKLYVSR
Query: NILFDELTFSFAT-KGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVS--VNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSVI
+++FDE FS+A+ + ++ S+S + S+IP+ P + +SL +L +V+ V D++ + +S L P V S SLQ
Subjt: NILFDELTFSFAT-KGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVS--VNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSVI
Query: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
P P +N H M+TR KSGI++PKAL+ EP N K ALK W AM +E L +N TWT V P + +GCKWV+K K ++DG + R KARLVA
Subjt: PCPIVNAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVA
Query: KGFHQTLDVNF
KGFHQ +F
Subjt: KGFHQTLDVNF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.6e-08 | 34.23 | Show/hide |
Query: ISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQTLDVNF--FFRLLARLLNQ
+ ++DEI+ + K + W +A+ E + N TWT+ +P N+ +V +WVF VK + G RYKARLVA+GF Q +++ F +AR+ +
Subjt: ISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQTLDVNF--FFRLLARLLNQ
Query: LLFVFFLLLLL
F F L L++
Subjt: LLFVFFLLLLL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-21 | 28.48 | Show/hide |
Query: ASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCF---PYLRPYKLDFRSKPCTFLGYSSMHKGYKCLDE-NGKLYVSRNI
A +P +FW +A TA +LINR + L P + ++ YS L VFG + F P + KLD +S PC F+GY GY+ D K+ SR++
Subjt: ASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCF---PYLRPYKLDFRSKPCTFLGYSSMHKGYKCLDE-NGKLYVSRNI
Query: LFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSVIPCPIV
+F E T + ++ + + I S +S +T + ++ L + V H Q + P+
Subjt: LFDELTFSFATKGHSPKTTSKSVVTSSIPILSQPPQSSSQSLSTLQPPNVSVNDSSTLQNSSPLLSSPPSQPVASDTHSLQSNGANDIAPITSVIPCPIV
Query: NAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVAL---KCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKG
+ + + LIS D+ EP + K L + KAMQ+E + L +N T+ LV P ++ + CKWVFK+KK D + RYKARLV KG
Subjt: NAHPMQTRGKSGIFRPKALISKTYDEIEPPNAKVAL---KCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKG
Query: FHQTLDVNF
F Q ++F
Subjt: FHQTLDVNF
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-22 | 54.29 | Show/hide |
Query: MQTRGKSGI--FRPK-ALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQT
M TR K+GI PK +L T + EP + ALK W +AMQ+E D L +NKTW LV P+NQ ++GCKWVFK K HSDGT+ R KARLVAKGFHQ
Subjt: MQTRGKSGI--FRPK-ALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQT
Query: LDVNF
+ F
Subjt: LDVNF
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-42 | 34.7 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLD-ENGKLYVS
+SHAS+P +W AF+ A++LINRL TP+L SP QKLF P+Y +L VFG C+P+LRPY KLD +S+ C FLGYS Y CL + +LY+S
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLD-ENGKLYVS
Query: RNILFDELTFSF---------------------------------------------ATKGHSPKTTSK----------SVVTSSIPILSQP-------P
R++ FDE F F AT SP + S +SS P +P P
Subjt: RNILFDELTFSF---------------------------------------------ATKGHSPKTTSK----------SVVTSSIPILSQP-------P
Query: QSSSQSLSTLQPPNVSVNDS-STLQNSSP-----LLSSP--PSQPVASDTHSLQSNGANDIAPITSVIPCP------------IVNAHPMQTRGKSGIFR
Q ++Q T + S N S + N SP LS+P S S T S S+ + P + P P +N H M TR K+GI +
Subjt: QSSSQSLSTLQPPNVSVNDS-STLQNSSP-----LLSSP--PSQPVASDTHSLQSNGANDIAPITSVIPCP------------IVNAHPMQTRGKSGIFR
Query: PK---ALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQ-KVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQ
P +L E EP A ALK WR AM E + + N TW LV P + +VGC+W+F K +SDG++ RYKARLVAKG++Q
Subjt: PK---ALISKTYDEIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLVSKPINQ-KVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.7e-44 | 33.33 | Show/hide |
Query: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLD-ENGKLYVS
+SHAS+P +W AFS A++LINRL TP+L SP QKLF + P+Y +L VFG C+P+LRPY KL+ +SK C F+GYS Y CL G+LY S
Subjt: MSHASMPLAFWDDAFSTAIHLINRLSTPVLHGVSPLQKLFDRVPDYSQLCVFGFKCFPYLRPY---KLDFRSKPCTFLGYSSMHKGYKCLD-ENGKLYVS
Query: RNILFDELTFSFATKGHSPKT------------------------------------TSKSVVTSSIPIL------SQPPQSSSQSLSTLQP--------
R++ FDE F F+T T TS +S P+ S P SS S S+ +P
Subjt: RNILFDELTFSFATKGHSPKT------------------------------------TSKSVVTSSIPIL------SQPPQSSSQSLSTLQP--------
Query: -PNVSVNDSSTLQNSSPLLSSP----------------PSQPVAS----------DTHSLQSNGANDIAPITSVIPCP---------IVNAHPMQTRGKS
P + + ++SP+L++P P P++S + S+ + P+ V+P P VN H M TR K
Subjt: -PNVSVNDSSTLQNSSPLLSSP----------------PSQPVAS----------DTHSLQSNGANDIAPITSVIPCP---------IVNAHPMQTRGKS
Query: GIFRPKALISKTYD---EIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLV-SKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQ
GI +P S EP A A+K WR+AM E + + N TW LV P + +VGC+W+F K +SDG++ RYKARLVAKG++Q
Subjt: GIFRPKALISKTYD---EIEPPNAKVALKCAHWRKAMQDEYDDLMQNKTWTLV-SKPINQKVVGCKWVFKVKKHSDGTIARYKARLVAKGFHQ
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