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Sed0023413 (gene) of Chayote v1 genome

Gene IDSed0023413
OrganismSechium edule (Chayote v1)
DescriptionPlant protein 1589 of Uncharacterized protein function
Genome locationLG03:43026199..43027826
RNA-Seq ExpressionSed0023413
SyntenySed0023413
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143067.2 uncharacterized protein LOC101211262 [Cucumis sativus]3.8e-3779.59Show/hide
Query:  PHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY
        P++HHFLPCFHC PHAYIRMVQHLIERCLLLHMSRDECV ALA HANIRPL+TLTVWKELQKEN+ FFRAYFH+++PN FL KFT S   R + RRQY
Subjt:  PHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY

XP_022132210.1 uncharacterized protein LOC111005125 [Momordica charantia]2.6e-3876.92Show/hide
Query:  MYPHTH-HFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQ
        MY ++H  FLPCFHCHPHAYIRMVQHLIERCLLLHMS DEC  ALA+HANIRPL+TLTVW+ELQKENT+FFR+YFH+++P   L KFTRS +PR+MRRRQ
Subjt:  MYPHTH-HFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQ

Query:  YHRR
        YH R
Subjt:  YHRR

XP_022951733.1 uncharacterized protein LOC111454474 [Cucurbita moschata]1.3e-3776.7Show/hide
Query:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY
        M+P+ HHFLPCFHCHPHAYIRM+QHLIERCLLLHMSRDECV AL  HANIRPL+TLTVWKELQKENT+FFRAY  ++ P  FL KF RS  P I RRRQ 
Subjt:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY

Query:  HRR
        H R
Subjt:  HRR

XP_023538195.1 uncharacterized protein LOC111799040 isoform X2 [Cucurbita pepo subsp. pepo]4.5e-3877.67Show/hide
Query:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY
        M+P+ HHFLPCFHCHPHAYIRM+QHLIERCLLLHMSRDECV ALA HANIRPL+TLTVWKELQKENT+FFRAY  ++ P  FL KF RS  P I RRRQ 
Subjt:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY

Query:  HRR
        H R
Subjt:  HRR

XP_038884418.1 uncharacterized protein LOC120075271 isoform X1 [Benincasa hispida]2.6e-3880.39Show/hide
Query:  PHTHHF-LPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQYH
        PH HHF +PCFHCHPHAYIRMVQHLIERCLLLHMSRDECV ALA+HANIRPL+TLTVWKELQKEN++FFRAYFH+++PN FL KFTR   P  M RRQYH
Subjt:  PHTHHF-LPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQYH

Query:  RR
         R
Subjt:  RR

TrEMBL top hitse value%identityAlignment
A0A0A0LMP2 Uncharacterized protein1.8e-3779.59Show/hide
Query:  PHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY
        P++HHFLPCFHC PHAYIRMVQHLIERCLLLHMSRDECV ALA HANIRPL+TLTVWKELQKEN+ FFRAYFH+++PN FL KFT S   R + RRQY
Subjt:  PHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY

A0A1S3BA39 uncharacterized protein LOC1034877014.1e-3777.23Show/hide
Query:  PHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQYHR
        P+ HHFLPCFHC PHAYIRMVQHLIERCLLLHMSRDECV ALA+HANIRPL+TLTVWKELQKEN+ FFRAYFH+++PN FL KFT S    I+RR+  +R
Subjt:  PHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQYHR

Query:  R
        R
Subjt:  R

A0A6J1BRT4 uncharacterized protein LOC1110051251.3e-3876.92Show/hide
Query:  MYPHTH-HFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQ
        MY ++H  FLPCFHCHPHAYIRMVQHLIERCLLLHMS DEC  ALA+HANIRPL+TLTVW+ELQKENT+FFR+YFH+++P   L KFTRS +PR+MRRRQ
Subjt:  MYPHTH-HFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQ

Query:  YHRR
        YH R
Subjt:  YHRR

A0A6J1GIJ5 uncharacterized protein LOC1114544746.3e-3876.7Show/hide
Query:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY
        M+P+ HHFLPCFHCHPHAYIRM+QHLIERCLLLHMSRDECV AL  HANIRPL+TLTVWKELQKENT+FFRAY  ++ P  FL KF RS  P I RRRQ 
Subjt:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY

Query:  HRR
        H R
Subjt:  HRR

A0A6J1K802 uncharacterized protein LOC111492501 isoform X29.1e-3775.49Show/hide
Query:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY
        MYP++H FLPCFHCHP AYIRMVQHLIERCLLLHMSRDECV ALA+HANIRPL+T TVWKELQKEN +FFRAYF +++ + FL KFTR  V RIMRR+  
Subjt:  MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQY

Query:  HR
         R
Subjt:  HR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.1 Plant protein 1589 of unknown function8.8e-2449.14Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLT------------------------VWKELQKENTQFFRAYFHSVAPNH
        H+ LPC HC PH+YIRMVQH+IERC+LL M+RDECV AL +HA+I PLVTLT                        VW+ LQ+EN  FF  Y H V+P  
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLT------------------------VWKELQKENTQFFRAYFHSVAPNH

Query:  FLGKFTRSRVPRIMRR
        FL  + R R PR  +R
Subjt:  FLGKFTRSRVPRIMRR

AT1G10657.2 Plant protein 1589 of unknown function7.6e-2861.96Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRR
        H+ LPC HC PH+YIRMVQH+IERC+LL M+RDECV AL +HA+I PLVTLTVW+ LQ+EN  FF  Y H V+P  FL  + R R PR  +R
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRR

AT1G10657.3 Plant protein 1589 of unknown function3.8e-2766.25Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGK
        H+ LPC HC PH+YIRMVQH+IERC+LL M+RDECV AL +HA+I PLVTLTVW+ LQ+EN  FF  Y H V+P  FL K
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGK

AT1G10657.4 Plant protein 1589 of unknown function4.3e-2370.77Show/hide
Query:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFF
        H+ LPC HC PH+YIRMVQH+IERC+LL M+RDECV AL +HA+I PLVTLTVW+ LQ+EN  FF
Subjt:  HHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFF

AT3G55240.1 Plant protein 1589 of unknown function1.1e-1866.07Show/hide
Query:  AYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAY
        +YI MVQH+IE+CL+ HMS++ECV AL+ HANI P++T TVWKEL+KEN +FF+AY
Subjt:  AYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCCTCACACCCACCACTTTCTTCCTTGTTTTCATTGCCACCCCCATGCCTATATCAGGATGGTCCAACACCTGATAGAGAGATGCTTGCTGCTTCATATGAGCCG
AGATGAGTGCGTAAACGCACTCGCTTACCATGCGAATATTCGCCCTCTCGTTACACTTACAGTCTGGAAAGAGCTTCAGAAAGAGAACACTCAATTTTTTCGAGCATATT
TCCATTCTGTTGCTCCCAACCATTTCCTCGGCAAATTCACGAGGAGTCGTGTGCCAAGGATAATGAGGAGAAGACAGTATCACCGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
GCAATAATCATCAATCCATGGTTCTTATTTGGTTGGAGATGAAGTGTATCTATCTAGATTGCTTGTGCTATTGTGACCCTTCACTTAGATATCTGTGGATAATATTTATT
CTCTTCTTTTTGCTATAAGAACTTCACAAAACATATATCTTCTCCTCTTTGGCACTTATGAACAACCCTTTTGTTCTCTTATCCTTCTCAAAACATTTCCTTCTTTATCT
GTATTATATGTACTTACAATTGTATTTGGTTTTGTCCAATTGTAATTAAGCCCTTATTTTCAATGTACCCTCACACCCACCACTTTCTTCCTTGTTTTCATTGCCACCCC
CATGCCTATATCAGGATGGTCCAACACCTGATAGAGAGATGCTTGCTGCTTCATATGAGCCGAGATGAGTGCGTAAACGCACTCGCTTACCATGCGAATATTCGCCCTCT
CGTTACACTTACAGTCTGGAAAGAGCTTCAGAAAGAGAACACTCAATTTTTTCGAGCATATTTCCATTCTGTTGCTCCCAACCATTTCCTCGGCAAATTCACGAGGAGTC
GTGTGCCAAGGATAATGAGGAGAAGACAGTATCACCGGAGGTGAAGGATAATTTGTACTACATACATACAAACATATATATATATATATATAGATTGATAATTTATTTAA
GTGGTTTCTACATAATAATGAAGTTAGATTAGCTTGTTATTATTTTTATTTTGGAAAAGAAAGTCAAGATGCTAAACATAGAGCATCTTTAGGCAATATATCAAAATCAA
ATTAAACTGATAAATGGCGTATTCATATTCTCTATATATCTCCATGCTGATCCATACAAGATATGTATTAACTTTTCCATATGTTGGATCTTCCAAAAATTGATTACCTA
CCTTATGCTTTTATTCTTTATTAAATGTAATCAATAAATAACGTTTGTCGTTT
Protein sequenceShow/hide protein sequence
MYPHTHHFLPCFHCHPHAYIRMVQHLIERCLLLHMSRDECVNALAYHANIRPLVTLTVWKELQKENTQFFRAYFHSVAPNHFLGKFTRSRVPRIMRRRQYHRR