; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023421 (gene) of Chayote v1 genome

Gene IDSed0023421
OrganismSechium edule (Chayote v1)
DescriptionGibberellin-regulated family protein
Genome locationLG13:20866691..20868746
RNA-Seq ExpressionSed0023421
SyntenySed0023421
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608594.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3371.96Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MAIS +SKA L+TC+ M+L+VV+ V A E VNSI G+ A P  IQSIDCG AC +RC  SSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGR KCP
Subjt:  GGRPKCP

XP_022139249.1 gibberellin-regulated protein 11-like [Momordica charantia]6.3e-3575.7Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MA SV+SK  LITC+FM+L+V+ FV AHE VN   G TADP KIQ+IDCG AC  RC  SSRPNLCKRACGTCCARCSCVPPGTSGGY+ CPCYA +TTR
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGRPKCP
Subjt:  GGRPKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]3.1e-3472.9Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MAIS +SKA L+TC+ M+L+VV+ V A E VNSI G+ A P  IQSIDCG AC +RC  SSRPNLCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGR KCP
Subjt:  GGRPKCP

XP_022982305.1 gibberellin-regulated protein 1-like [Cucurbita maxima]2.6e-3371.03Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MAIS +SKA L+TC+ M+L+VV+ V A E VNSI G+ A P  +QSIDCG AC +RC  SSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGR KCP
Subjt:  GGRPKCP

XP_023525231.1 snakin-2-like [Cucurbita pepo subsp. pepo]3.5e-3371.03Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MAIS +SKA L+TC+ M+L+VV+ V A + VNSI G+ A P  IQSIDCG AC +RC  SSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGR KCP
Subjt:  GGRPKCP

TrEMBL top hitse value%identityAlignment
A0A6J1CCE1 gibberellin-regulated protein 11-like3.0e-3575.7Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MA SV+SK  LITC+FM+L+V+ FV AHE VN   G TADP KIQ+IDCG AC  RC  SSRPNLCKRACGTCCARCSCVPPGTSGGY+ CPCYA +TTR
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGRPKCP
Subjt:  GGRPKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like1.5e-3472.9Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MAIS +SKA L+TC+ M+L+VV+ V A E VNSI G+ A P  IQSIDCG AC +RC  SSRPNLCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGR KCP
Subjt:  GGRPKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like1.3e-3371.03Show/hide
Query:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR
        MAIS +SKA L+TC+ M+L+VV+ V A E VNSI G+ A P  +QSIDCG AC +RC  SSRP+LCKRACGTCCARC+CVPPGTSGGYETCPCYA +TT 
Subjt:  MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTR

Query:  GGRPKCP
        GGR KCP
Subjt:  GGRPKCP

A0A6M2EE52 Uncharacterized protein2.2e-2564.29Show/hide
Query:  LITCLFMALVVVYFVEA-HEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP
        LI  L ++L+V+YF EA H++VNS    ++ P K   IDCG AC ARC  SSRP LCKRACGTCC+RCSCVPPGT+G YE CPCYA +TT GGR KCP
Subjt:  LITCLFMALVVVYFVEA-HEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP

A0A7N2KST3 Uncharacterized protein1.3e-2563.73Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK
        ISKA LI  + ++++V Y VEA +MVN+ D     P K   IDCG AC ARC  SSRPNLCKRACGTCCARCSCVPPGTSG  + CPCYA + TRGG+ K
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK

Query:  CP
        CP
Subjt:  CP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.4e-2156.12Show/hide
Query:  VLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP
        VL+  L ++L+V+ FV A +MV S D           IDC   C  RC+ SSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY  +TT GGR KCP
Subjt:  VLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP

P46687 Gibberellin-regulated protein 32.3e-1947.06Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK
        I ++ L+  L +  +  + +  H   +S  G       +  IDCG  C  RC+ SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA +TTRGGR K
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK

Query:  CP
        CP
Subjt:  CP

P46688 Gibberellin-regulated protein 24.3e-1848.48Show/hide
Query:  AVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP
        AV  + L + L++V        V++ DG       +  IDCG  C  RC+ SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA +TT GGR KCP
Subjt:  AVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP

P46689 Gibberellin-regulated protein 17.8e-2052.94Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK
        ISKA LI  L ++L+V+  V+A      ++         + IDCG AC ARC  S RP LC RACGTCC RC+CVPPGT G Y+ C CYA +TT GGR K
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK

Query:  CP
        CP
Subjt:  CP

Q93X17 Snakin-21.4e-2153.21Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSI--DGITADPV-----KIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVT
        ISKA+  + L   L++       E V SI  D +T++ +       + IDCG AC ARC  SSRP LC RACGTCCARC+CVPPGTSG  ETCPCYA +T
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSI--DGITADPV-----KIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVT

Query:  TRGGRPKCP
        T G + KCP
Subjt:  TRGGRPKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 15.5e-2152.94Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK
        ISKA LI  L ++L+V+  V+A      ++         + IDCG AC ARC  S RP LC RACGTCC RC+CVPPGT G Y+ C CYA +TT GGR K
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK

Query:  CP
        CP
Subjt:  CP

AT1G75750.2 GAST1 protein homolog 13.8e-2254.9Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK
        ISKA LI  L ++L+V+  V+A E     +G        + IDCG AC ARC  S RP LC RACGTCC RC+CVPPGT G Y+ C CYA +TT GGR K
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK

Query:  CP
        CP
Subjt:  CP

AT2G18420.1 Gibberellin-regulated family protein1.0e-2256.12Show/hide
Query:  VLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP
        VL+  L ++L+V+ FV A +MV S D           IDC   C  RC+ SSRPNLC RACGTCCARC+CV PGTSG Y+ CPCY  +TT GGR KCP
Subjt:  VLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP

AT4G09600.1 GAST1 protein homolog 31.6e-2047.06Show/hide
Query:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK
        I ++ L+  L +  +  + +  H   +S  G       +  IDCG  C  RC+ SSRPNLC RAC +CC RC+CVPPGT+G +  CPCYA +TTRGGR K
Subjt:  ISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPK

Query:  CP
        CP
Subjt:  CP

AT4G09610.1 GAST1 protein homolog 23.0e-1948.48Show/hide
Query:  AVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP
        AV  + L + L++V        V++ DG       +  IDCG  C  RC+ SSR  LC RAC +CC+RC+CVPPGTSG    CPCYA +TT GGR KCP
Subjt:  AVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATTTCTGTTATTTCTAAAGCTGTTTTAATTACATGTCTTTTCATGGCCCTTGTGGTAGTTTATTTTGTTGAAGCTCATGAAATGGTGAACTCAATTGATGGTAT
TACGGCCGATCCTGTTAAGATTCAAAGTATCGATTGTGGAGTAGCTTGTGATGCAAGGTGCACGTCATCTTCAAGGCCAAATCTATGCAAGAGGGCATGTGGCACGTGCT
GTGCACGTTGCAGCTGTGTGCCACCTGGCACTTCCGGCGGCTACGAAACCTGCCCTTGCTACGCCGGCGTCACCACTCGCGGCGGCCGCCCTAAGTGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
GAAACAAACGTTGGGTTTTTAGCTCTCCGATCTTTGCTTCTCATCTTCAATGGCAATTTCTGTTATTTCTAAAGCTGTTTTAATTACATGTCTTTTCATGGCCCTTGTGG
TAGTTTATTTTGTTGAAGCTCATGAAATGGTGAACTCAATTGATGGTATTACGGCCGATCCTGTTAAGATTCAAAGTATCGATTGTGGAGTAGCTTGTGATGCAAGGTGC
ACGTCATCTTCAAGGCCAAATCTATGCAAGAGGGCATGTGGCACGTGCTGTGCACGTTGCAGCTGTGTGCCACCTGGCACTTCCGGCGGCTACGAAACCTGCCCTTGCTA
CGCCGGCGTCACCACTCGCGGCGGCCGCCCTAAGTGTCCCTAATTAAATTTATTAAAAAAACACTCTTTCAATTAATTAATGTAAAATATC
Protein sequenceShow/hide protein sequence
MAISVISKAVLITCLFMALVVVYFVEAHEMVNSIDGITADPVKIQSIDCGVACDARCTSSSRPNLCKRACGTCCARCSCVPPGTSGGYETCPCYAGVTTRGGRPKCP