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Sed0023450 (gene) of Chayote v1 genome

Gene IDSed0023450
OrganismSechium edule (Chayote v1)
DescriptionLipid transfer protein
Genome locationLG06:9339888..9340446
RNA-Seq ExpressionSed0023450
SyntenySed0023450
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES80599.1 Lipid transfer protein [Medicago truncatula]1.9e-1242.22Show/hide
Query:  IVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        +VC  M  + + L++E         CD  +L  C  A IF S PS  CC++L+   TPCFCEY+++PDY  ++NS  AR +A  CNV IP
Subjt:  IVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

KAE8648021.1 hypothetical protein Csa_005848 [Cucumis sativus]1.5e-1747.96Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSC
        +T +VC+F+VA T+ LL  A P      CD  QLSSC  AF FG  PSQ CC +L+    PC+CEY+ +PD + F+NS++AR IAK CN+++P  + C
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSC

KAE8649342.1 hypothetical protein Csa_014385 [Cucumis sativus]1.5e-1747.96Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSC
        +T +VC+F+VA T+ LL  A P      CD  QLSSC  AF FG  PSQ CC +L+    PC+CEY+ +PD + F+NS++AR IAK CN+++P  + C
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSC

KAG7026200.1 hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1243.69Show/hide
Query:  MTKLLTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAAS
        M K   T+VC FMVA     L  A   G   TCD + L+        G RPS  CC +L+    PC+C YL NPD K F++S +AR IA+ CN+TIP  +
Subjt:  MTKLLTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAAS

Query:  SCP
         CP
Subjt:  SCP

XP_008444079.1 PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo]8.5e-2147.47Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP
        +T +VC+F+VA T+ LL    P      CD  QLSSC PAF+FG  P+Q CCT+L+A   PC+CEY  +P+ ++F+NS++AR +A+ CN+T P  + CP
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP

TrEMBL top hitse value%identityAlignment
A0A0A0KZL4 Putative lipid transfer protein family protein7.3e-1847.96Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSC
        +T +VC+F+VA T+ LL  A P      CD  QLSSC  AF FG  PSQ CC +L+    PC+CEY+ +PD + F+NS++AR IAK CN+++P  + C
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSC

A0A1S3BAC3 non-specific lipid-transfer protein 2P-like4.1e-2147.47Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP
        +T +VC+F+VA T+ LL    P      CD  QLSSC PAF+FG  P+Q CCT+L+A   PC+CEY  +P+ ++F+NS++AR +A+ CN+T P  + CP
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP

A0A5A7V7R4 Non-specific lipid-transfer protein 2P-like4.1e-2147.47Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP
        +T +VC+F+VA T+ LL    P      CD  QLSSC PAF+FG  P+Q CCT+L+A   PC+CEY  +P+ ++F+NS++AR +A+ CN+T P  + CP
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP

B6U7P4 Lipid transfer protein13.5e-1235.96Show/hide
Query:  VCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        V +F+ A+    L+   PAG   TC   QL+ C PA +  + P+  CC +L+AHP  CFC+Y +NP  + ++NS + + +   C V++P
Subjt:  VCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

G7KV68 Lipid transfer protein9.2e-1342.22Show/hide
Query:  IVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        +VC  M  + + L++E         CD  +L  C  A IF S PS  CC++L+   TPCFCEY+++PDY  ++NS  AR +A  CNV IP
Subjt:  IVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

SwissProt top hitse value%identityAlignment
P20145 Probable non-specific lipid-transfer protein1.7e-0834.12Show/hide
Query:  MVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        M+ M + L   A  AG    C+  QL+ C  A + G++PS  CC  L+A    C C+Y+K+P+Y  +++S  AR+    C + +P
Subjt:  MVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

P82900 Non-specific lipid-transfer protein 2G9.2e-1034.44Show/hide
Query:  IVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        +V   M+A+ +   + A P G    C   QL+ C  A + G++PS  CC  L+A    CFC+Y K+P Y  +I S  AR+    C + +P
Subjt:  IVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

P82901 Non-specific lipid-transfer protein 2P2.7e-0940Show/hide
Query:  CDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        C   QL+ C  A + G++PS  CC  L+A   PCFC+Y K+P Y  +I S  AR+  + C + +P
Subjt:  CDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

P86809 Non-specific lipid-transfer protein 27.8e-0941.54Show/hide
Query:  TCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTI
        TC   QLS C  A    + PS  CC +L+    PC C YLK+P+ K+++NS  AR  A  C V +
Subjt:  TCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTI

Q43681 Probable non-specific lipid-transfer protein AKCS96.1e-1438.95Show/hide
Query:  KLLTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        K+  ++VC   V +    LI+  P     TC+  +LSSC PA   GS+PS  CC++L+    PC C Y+KNP  K ++NS  A+ +   C VT P
Subjt:  KLLTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

Arabidopsis top hitse value%identityAlignment
AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.0e-0938.46Show/hide
Query:  CDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        C V +L  C P+ I GS+PS  CC +L+     CFC+YL+NP +  +I   +A+ I   C +  P
Subjt:  CDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.8e-1130.85Show/hide
Query:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPA
        +  ++ V ++A+   +L+   P     TC   QL+SC  A    S PS+ CCT+L+    PC C Y++NP  + +++S +AR ++  C +  P+
Subjt:  LTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPA

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.2e-1034Show/hide
Query:  KLLTTIVCVFMVAMT-IQLLIEAQPAG----TPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        K++T ++ VF++  T     I+A+  G       TCD  QL  C  A   G +PS  CC +L    + C C + KNP +  +I+S +AR +   CNV  P
Subjt:  KLLTTIVCVFMVAMT-IQLLIEAQPAG----TPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1038.89Show/hide
Query:  VFMVAMTIQLLIEAQP---AGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        VF     + +LI AQ    A   P C+  QLS C    + GS PS  CC++++     C C+YLKNP++K F+NS +A+ IA  C+   P
Subjt:  VFMVAMTIQLLIEAQP---AGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.2e-1040.91Show/hide
Query:  TCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP
        TCD  QLSSC    + G  PS  CC +L+    PCFC Y+K+P Y  ++ S +A+     C V  P
Subjt:  TCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAACTTCTAACGACCATTGTTTGTGTGTTCATGGTGGCCATGACTATACAGCTTCTCATCGAAGCTCAACCGGCAGGCACGCCACCAACCTGCGATGTTGAGCA
GCTGAGTTCATGTTTCCCTGCGTTCATATTCGGTTCACGGCCGAGCCAGGGATGCTGCACGCAGTTGCAGGCGCATCCAACCCCATGCTTTTGCGAGTACCTCAAAAATC
CAGATTATAAGGACTTTATAAATTCTAATTCTGCTAGAAACATTGCTAAGAAATGTAACGTTACCATCCCAGCTGCTAGCAGCTGCCCGTAG
mRNA sequenceShow/hide mRNA sequence
AACACATCTATTACTCCTTTCCCTCTTTCCCATCCACAAAACCAATGACGAAACTTCTAACGACCATTGTTTGTGTGTTCATGGTGGCCATGACTATACAGCTTCTCATC
GAAGCTCAACCGGCAGGCACGCCACCAACCTGCGATGTTGAGCAGCTGAGTTCATGTTTCCCTGCGTTCATATTCGGTTCACGGCCGAGCCAGGGATGCTGCACGCAGTT
GCAGGCGCATCCAACCCCATGCTTTTGCGAGTACCTCAAAAATCCAGATTATAAGGACTTTATAAATTCTAATTCTGCTAGAAACATTGCTAAGAAATGTAACGTTACCA
TCCCAGCTGCTAGCAGCTGCCCGTAGCTAGAAGCTATGGCTTGGCTGATTTTGGACTTTCGTATTCCAATATAAAAAAGTTGTGTCCTGCCAACAGCCATTTAAATTTAT
AGTACTGAAGTATTAACCTACGAATAAAGGCATCAAATTAAAACAGTCAACTCTTTTCTTTGTCTATGTTATAAACTTTCCATACATGTTTTTCTATACGCACTTATATA
ATATACAAG
Protein sequenceShow/hide protein sequence
MTKLLTTIVCVFMVAMTIQLLIEAQPAGTPPTCDVEQLSSCFPAFIFGSRPSQGCCTQLQAHPTPCFCEYLKNPDYKDFINSNSARNIAKKCNVTIPAASSCP