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Sed0023451 (gene) of Chayote v1 genome

Gene IDSed0023451
OrganismSechium edule (Chayote v1)
Descriptionprotein CASPARIAN STRIP INTEGRITY FACTOR 1-like
Genome locationLG01:2183819..2185816
RNA-Seq ExpressionSed0023451
SyntenySed0023451
Gene Ontology termsGO:0010039 - response to iron ion (biological process)
GO:0010447 - response to acidic pH (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:2000067 - regulation of root morphogenesis (biological process)
GO:0016020 - membrane (cellular component)
GO:0048226 - Casparian strip (cellular component)
InterPro domainsIPR038974 - Protein Casparian strip integrity factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460971.1 PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo]1.0e-2878.72Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YK +FIFILLLSTSFLS+IC AGRP  S +V E  ANGGVVHEDA +K R DEM+ DIIHERLLRVNTKDYGRYDPAP FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
XP_011649242.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus]3.1e-2574.47Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YK +FIFILLLSTSFLSTIC AGRP  S +V E  A GGVVHED  +K R  EM+ +IIHERLLRVNTKDYGRYDP+P FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
XP_022146128.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia]1.1e-2267.74Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YKF+F+F LL+STS LST   AGRP  S +V +AA GGVVH+D  ++KR  EM+   IHERLLR NTKDYGRYDPAP FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
XP_022986650.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima]3.8e-2368.04Show/hide
Query:  MGVMFFNYKFTFI-FILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        +G+MFF YK  F+ F LLLSTSF STIC AGRP  S +VHE  N GVVHE   K+   DEM+   +HERLLRVNTKDYGRYDP+P+FVKPPFKLIPN
Subjt:  MGVMFFNYKFTFI-FILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
XP_038902215.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida]3.7e-2675.53Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YK +FIFILLLSTSFLSTIC AGRP  S +V E  ANGGVVHEDA +K R +  D   IHERLLRVNTKDYGRYDPAP FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
TrEMBL top hitse value%identityAlignment
A0A0A0LJ22 Uncharacterized protein1.5e-2574.47Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YK +FIFILLLSTSFLSTIC AGRP  S +V E  A GGVVHED  +K R  EM+ +IIHERLLRVNTKDYGRYDP+P FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
A0A1S3CEV9 uncharacterized protein LOC1034996985.0e-2978.72Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YK +FIFILLLSTSFLS+IC AGRP  S +V E  ANGGVVHEDA +K R DEM+ DIIHERLLRVNTKDYGRYDPAP FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
A0A5A7TUS0 Uncharacterized protein5.0e-2978.72Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YK +FIFILLLSTSFLS+IC AGRP  S +V E  ANGGVVHEDA +K R DEM+ DIIHERLLRVNTKDYGRYDPAP FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHE-AANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
A0A6J1CXR3 protein CASPARIAN STRIP INTEGRITY FACTOR 15.3e-2367.74Show/hide
Query:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MF  YKF+F+F LL+STS LST   AGRP  S +V +AA GGVVH+D  ++KR  EM+   IHERLLR NTKDYGRYDPAP FVKPPFKLIPN
Subjt:  MFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
A0A6J1JEM0 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like1.8e-2368.04Show/hide
Query:  MGVMFFNYKFTFI-FILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        +G+MFF YK  F+ F LLLSTSF STIC AGRP  S +VHE  N GVVHE   K+   DEM+   +HERLLRVNTKDYGRYDP+P+FVKPPFKLIPN
Subjt:  MGVMFFNYKFTFI-FILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
SwissProt top hitse value%identityAlignment
O65684 Protein CASPARIAN STRIP INTEGRITY FACTOR 26.8e-0739.58Show/hide
Query:  MGVMFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MG++    K  FI  LL+S S  + +C AGR  +     E  +  VV      ++R  E      HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  MGVMFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
Q84MD2 Protein CASPARIAN STRIP INTEGRITY FACTOR 11.8e-0744.32Show/hide
Query:  KFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        K  FIF +++S S LS +  AGRP  S  VH+  N   + E+  ++   +       HERLLR+NTKDYG   P+P   +PPFKLIPN
Subjt:  KFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
Arabidopsis top hitse value%identityAlignment
AT2G16385.1 unknown protein1.3e-0844.32Show/hide
Query:  KFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        K  FIF +++S S LS +  AGRP  S  VH+  N   + E+  ++   +       HERLLR+NTKDYG   P+P   +PPFKLIPN
Subjt:  KFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
AT4G34600.1 unknown protein4.8e-0839.58Show/hide
Query:  MGVMFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN
        MG++    K  FI  LL+S S  + +C AGR  +     E  +  VV      ++R  E      HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  MGVMFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTCATGTTTTTTAACTACAAGTTCACCTTCATCTTCATCCTCCTCCTCTCAACCTCATTTTTATCCACCATTTGCAAAGCAGGTCGACCTGTTGTTTCTAACAT
GGTTCATGAGGCTGCTAATGGGGGAGTTGTGCACGAGGATGCATCAAAGAAGAAAAGAAGTGATGAAATGGATCATGACATTATCCATGAAAGGCTGTTGAGGGTAAACA
CCAAAGACTATGGAAGATATGATCCAGCTCCAACTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATCATTTGGGTCTATGCTCCTTGGAAAGAAAAGAAAAAACAGAAGAGAGAAATAAGAAGGAAAAAAAAAACACAACTTTGAAAAACACAACATCATCATTTAAGGTTGTT
TCTATCATATGGGAGTCATGTTTTTTAACTACAAGTTCACCTTCATCTTCATCCTCCTCCTCTCAACCTCATTTTTATCCACCATTTGCAAAGCAGGTCGACCTGTTGTT
TCTAACATGGTTCATGAGGCTGCTAATGGGGGAGTTGTGCACGAGGATGCATCAAAGAAGAAAAGAAGTGATGAAATGGATCATGACATTATCCATGAAAGGCTGTTGAG
GGTAAACACCAAAGACTATGGAAGATATGATCCAGCTCCAACTTTTGTGAAGCCTCCTTTCAAGCTCATCCCCAACTGAATCATACAAAAATCCCATCACCTAGCTAGCT
ACCTTATAAAATAAATAAATAATCATCTCAATTATTATATATATATATAGTGTCATAGTATAATTAGTATCATATGTATATTGTAAGATTAATGGTCACATATATGAATA
TATATATAGAGAGAGAGAGAGAGGGAGAGCTTTGTAATGTTTTGCTTGAGTAGCACTGCTATGTTTTGTGTACTTTGTAGTATATATGGTGTTTTTATAATTTTAGCCTA
TTTGTACTCTACCTAGTACTTTTATTGTAATACTACTTTGGTCTTGATTTTAATATAATAATCATGTGTATT
Protein sequenceShow/hide protein sequence
MGVMFFNYKFTFIFILLLSTSFLSTICKAGRPVVSNMVHEAANGGVVHEDASKKKRSDEMDHDIIHERLLRVNTKDYGRYDPAPTFVKPPFKLIPN