| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 3.0e-86 | 80.1 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFRIRKTV++ML+DR YFVGD EI+MSR+QF +K+GENMKRED+VINKA+RN+SSDQIY+FFPE KVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I S FHLEVFQEAEL+VNIKDHVL+PEHQLL+NEEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022955185.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 6.1e-87 | 81.55 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFRIRKT+M+ML+DR Y+VGD +I+MSR QF NK+G+NMKREDLVINKA RNNSSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I S FHLEVFQEAELMVN+KDHVLIPEHQLL+NEEKKTLLERYTVKETQLPRIQV DPIA+YYG+KRGQV+KIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 3.6e-87 | 80.58 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFR+RKTV++ML+DR YFVGD E++MSR+QF NK+GE+MKRED+VINKAKRN+SSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I + FHLEVFQEAEL+VNIKDHVL+PEHQLLSNEEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_023541037.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita pepo subsp. pepo] | 3.6e-87 | 81.55 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFR+RKT+M+ML+DR Y+VGD +IEMSR QF NK+G+NMKREDLVINKA RNNSSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I S FHLEVFQEAELMVN+KDHVLIPEHQLL+NEEKKTLLERYTVKETQLPRIQV DPIA+YYG+KRGQV+KIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| XP_038895255.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Benincasa hispida] | 7.2e-88 | 82.52 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI++LFR+RKTV++ML+DR YFVGDSE+ MSR+QF KFGE+MKREDLVINK+KRNNSS+QIYIFFPE PKVG+K VQTY+ RMKS+NV A+L
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR V I S FHLEVFQEAELMVNIKDHVLIPEHQLL+NEEKKTLLERYTVKETQLPRIQV DPIA+YYGMKRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CPU1 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.5e-86 | 80.1 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFRIRKTV++ML+DR YFVGD EI+MSR+QF +K+GENMKRED+VINKA+RN+SSDQIY+FFPE KVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I S FHLEVFQEAEL+VNIKDHVL+PEHQLL+NEEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1GUG5 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.0e-87 | 81.55 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFRIRKT+M+ML+DR Y+VGD +I+MSR QF NK+G+NMKREDLVINKA RNNSSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I S FHLEVFQEAELMVN+KDHVLIPEHQLL+NEEKKTLLERYTVKETQLPRIQV DPIA+YYG+KRGQV+KIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.7e-87 | 80.58 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFR+RKTV++ML+DR YFVGD E++MSR+QF NK+GE+MKRED+VINKAKRN+SSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I + FHLEVFQEAEL+VNIKDHVL+PEHQLLSNEEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1JX71 DNA-directed RNA polymerases II and IV subunit 5A-like | 3.0e-87 | 81.55 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFRIRKT+M+ML+DR Y+VGD +I+MSR QF NK+G+NMKREDLVINKA RNNSSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I S FHLEVFQEAELMVN+KDHVLIPEHQLL+NEEKKTLLERYTVKETQLPRIQV DPIA+YYG+KRGQV+KIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.7e-87 | 80.58 | Show/hide |
Query: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
MVL EEEI+RLFR+RKTV++ML+DR YFVGD E++MSR+QF NK+GE+MKRED+VINKAKRN+SSDQIYIFFPE PKVGVK ++TY RMKS+NV AIL
Subjt: MVLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV+ NLTPFAR +S I + FHLEVFQEAEL+VNIKDHVL+PEHQLLSNEEKKTLLERYTVKETQLPRIQV DP+A+YYG+KRGQVVKIIRPSETAGRYV
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.0e-49 | 48.31 | Show/hide |
Query: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMK-----REDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
E E RL+RIRKTV++M+ DR Y V E++ + F FG+ R DL I A ++ +DQ+++FFPE K+G+K ++ Q+M+ N+ AI
Subjt: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMK-----REDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
Query: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A+ + + + LE F EAELMVNI +H L+PEH +++ EEK LL RY +K++QLPRIQ DP+A+Y+G++RGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYVV
+TYR VV
Subjt: VTYRYVV
|
|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.8e-50 | 46.6 | Show/hide |
Query: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGE-----NMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
EEE RL++IRKT+M++ DR Y V E++ + ++F +FG+ +R DL + A ++ +DQ+++FFPE PKVG+K ++ Y QRM+ +N+ A+
Subjt: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGE-----NMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
Query: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A+ + + + LE F + EL++NI +H L+PEH +++ EE LL RY ++E+QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 6.8e-81 | 73.17 | Show/hide |
Query: VLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAILV
+L EEE+ RL+RI+KT+M+MLRDR YF+ DSE+ M++QQF+ K G+NMKREDLV KAKRN++SDQ+YIFFP+ KVGVK ++ Y RMKS+NV AILV
Subjt: VLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAILV
Query: VKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
V+ NLTPFAR +S I S FHLEVFQEAE++VNIK+HVL+PEHQ+L+ EEKKTLLERYTVKETQLPRIQV DPIA+Y+G+KRGQVVKIIRPSETAGRYVT
Subjt: VKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 6.2e-50 | 46.6 | Show/hide |
Query: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGE-----NMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
EEE RL++IRKT+M++ DR Y V E++ + ++F +FG+ +R DL + A ++ +DQ+++FFPE PKVG+K ++ Y QRM+ +N+ A+
Subjt: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGE-----NMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
Query: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A+ + + + LE F + EL++NI +H L+PEH +++ EE LL RY ++E QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.8e-50 | 46.6 | Show/hide |
Query: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGE-----NMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
EEE RL++IRKT+M++ DR Y V E++ + ++F +FG+ +R DL + A ++ +DQ+++FFPE PKVG+K ++ Y QRM+ +N+ A+
Subjt: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGE-----NMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAI
Query: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
+VV+ +TP A+ + + + LE F + EL++NI +H L+PEH +++ EE LL RY ++E+QLPRIQ DP+A+Y+G+KRGQVVKIIRPSETAGRY
Subjt: LVVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 5.6e-30 | 37.5 | Show/hide |
Query: EISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKS-DNVCSAILVVKVN
E + + R+T MEMLRDR Y V D +I +S QQF +GE+ + L I+ R +SS +I + F V V ++ + S +N+ ILV++ +
Subjt: EISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKS-DNVCSAILVVKVN
Query: LTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
+T A V + +F +E+F+ +L+VN+ HVL P+HQ+L+++EK++LL++++++E QLPR+ DPI +YYG++ GQV+K+ E + +VTYR V
Subjt: LTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 4.8e-82 | 73.17 | Show/hide |
Query: VLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAILV
+L EEE+ RL+RI+KT+M+MLRDR YF+ DSE+ M++QQF+ K G+NMKREDLV KAKRN++SDQ+YIFFP+ KVGVK ++ Y RMKS+NV AILV
Subjt: VLPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKSDNVCSAILV
Query: VKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
V+ NLTPFAR +S I S FHLEVFQEAE++VNIK+HVL+PEHQ+L+ EEKKTLLERYTVKETQLPRIQV DPIA+Y+G+KRGQVVKIIRPSETAGRYVT
Subjt: VKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.1e-25 | 33.83 | Show/hide |
Query: EISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQT-YLQRMKSDNVCSAILVVKVN
E R + R T EMLRDR Y V ++E+ ++ +F + FGE + E L I R++ +I + F + VK V+ ++Q + + + ILV++
Subjt: EISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQT-YLQRMKSDNVCSAILVVKVN
Query: LTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
+ FA+ ++ P F +E F +L+VNI H+ P+ ++L+ EEK+ LL ++ +++ QLP +Q D +YYG+K+ QVVKI E G +VTYR +
Subjt: LTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVTYRYV
Query: V
+
Subjt: V
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 9.0e-28 | 35.29 | Show/hide |
Query: LPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKS-DNVCSAILV
L EE R + R+ ++MLRDR Y V D +I +S F +GE + L I+ R++S+ ++ I F V V +++ + + S + + ILV
Subjt: LPEEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENMKREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQRMKS-DNVCSAILV
Query: VKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
++ ++T A + + +F +E+FQ +L+VNI H L P+HQ+L++EEK TLL++++++E QLPRI D I +YYG+++GQVVK+ E +V
Subjt: VKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
|
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 1.4e-44 | 44.17 | Show/hide |
Query: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENM---KREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQ-RMKSDNVCSAIL
++EI+R+F++R+TV++MLRDR Y + +S++ + R++F+ +F + M +E L ++ K N +D+IY+F+PE PKVGV +++ + +M+ D V I+
Subjt: EEEISRLFRIRKTVMEMLRDRCYFVGDSEIEMSRQQFMNKFGENM---KREDLVINKAKRNNSSDQIYIFFPEAPKVGVKIVQTYLQ-RMKSDNVCSAIL
Query: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
VV + +T AR VS + +EVF+EAEL+ NI +H L+ ++ +L ++ KK LL YTV++TQLPRI V DP+A+YYG+KRGQVVKI R T+ Y
Subjt: VVKVNLTPFARNYVSVIPSTFHLEVFQEAELMVNIKDHVLIPEHQLLSNEEKKTLLERYTVKETQLPRIQVNDPIAKYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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