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Sed0023465 (gene) of Chayote v1 genome

Gene IDSed0023465
OrganismSechium edule (Chayote v1)
DescriptionProlamin_like domain-containing protein
Genome locationLG05:1687789..1688727
RNA-Seq ExpressionSed0023465
SyntenySed0023465
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038539.1 hypothetical protein E6C27_scaffold92G00660 [Cucumis melo var. makuwa]5.9e-3468.75Show/hide
Query:  LFALAISSPIRSAFALGMTPDAA----CWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPP
        L ALAISS  +SAFA+    +A     CW AI AV GCQ++I+TAMK NEIEVSY CC+VI++G+PE+CAAVVFSSGGEFSPE+ GAV EYCDGMG+TPP
Subjt:  LFALAISSPIRSAFALGMTPDAA----CWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPP

Query:  VLE-EDDKVEEN
        VLE ED KV+EN
Subjt:  VLE-EDDKVEEN

KAE8652857.1 hypothetical protein Csa_023774, partial [Cucumis sativus]3.1e-1977.05Show/hide
Query:  EVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPPVLE-EDDKVEEN
        +VSY CC+VI++G+PE+CAAVVFSSGGEFSP++ GAV EYCDGMG+TPPVLE ED KVEEN
Subjt:  EVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPPVLE-EDDKVEEN

KAG6571831.1 hypothetical protein SDJN03_28559, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2862.71Show/hide
Query:  MPNSVPKIVSLLFALAISSPIRSAFALGMTP---------DAACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEI
        M  SV      L AL ISS I SAFAL   P          AAC  A+ AV GCQ EI+ A+  NEIEVSY CCRVI++GLPE+CAAVVFSSGGE S EI
Subjt:  MPNSVPKIVSLLFALAISSPIRSAFALGMTP---------DAACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEI

Query:  GGAVKEYCDGMGVTPPVL
         GAVKEYCDGMG+TPPVL
Subjt:  GGAVKEYCDGMGVTPPVL

XP_022931003.1 uncharacterized protein LOC111437329 [Cucurbita moschata]3.0e-3063.56Show/hide
Query:  KIVSLLFALAISSPIR--SAFALGMTPD---------AACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAV
        + V  L ALAISS I+  SAFAL   P+         A CW AI AV GCQDEI+ AMK NEIEVS  CCR I++GLP++CAA VFSSGGEFS EI GAV
Subjt:  KIVSLLFALAISSPIR--SAFALGMTPD---------AACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAV

Query:  KEYCDGMGVTPPVLEEDD
         EYCDGMG+TPPVLE D+
Subjt:  KEYCDGMGVTPPVLEEDD

TrEMBL top hitse value%identityAlignment
A0A0A0LEG0 Prolamin_like domain-containing protein1.8e-3364.23Show/hide
Query:  MPNSVPKIVSLLFALAISSPIRSAFALGMTPDAA----CWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVK
        M  SV      L  LA SS   SAFA+    +A     CW AI AV GCQ+EI+TAMK NEIEVSY CC+VI++G+PE+CAAVVFSSGGEFSP++ GAV 
Subjt:  MPNSVPKIVSLLFALAISSPIRSAFALGMTPDAA----CWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVK

Query:  EYCDGMGVTPPVLE-EDDKVEEN
        EYCDGMG+TPPVLE ED KVEEN
Subjt:  EYCDGMGVTPPVLE-EDDKVEEN

A0A5A7TB28 Prolamin_like domain-containing protein2.8e-3468.75Show/hide
Query:  LFALAISSPIRSAFALGMTPDAA----CWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPP
        L ALAISS  +SAFA+    +A     CW AI AV GCQ++I+TAMK NEIEVSY CC+VI++G+PE+CAAVVFSSGGEFSPE+ GAV EYCDGMG+TPP
Subjt:  LFALAISSPIRSAFALGMTPDAA----CWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPP

Query:  VLE-EDDKVEEN
        VLE ED KV+EN
Subjt:  VLE-EDDKVEEN

A0A6J1EX44 uncharacterized protein LOC1114373291.5e-3063.56Show/hide
Query:  KIVSLLFALAISSPIR--SAFALGMTPD---------AACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAV
        + V  L ALAISS I+  SAFAL   P+         A CW AI AV GCQDEI+ AMK NEIEVS  CCR I++GLP++CAA VFSSGGEFS EI GAV
Subjt:  KIVSLLFALAISSPIR--SAFALGMTPD---------AACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAV

Query:  KEYCDGMGVTPPVLEEDD
         EYCDGMG+TPPVLE D+
Subjt:  KEYCDGMGVTPPVLEEDD

A0A7J0HBY1 Prolamin_like domain-containing protein6.8e-0435.37Show/hide
Query:  FALGMTPDAACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTP
        F++   P   C   +K + GCQD++++  K    E+   CCR I  G+ + C  +VFSS   FS   G AVK+ C+ +G  P
Subjt:  FALGMTPDAACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAACTCGGTTCCCAAAATCGTCTCCCTCCTCTTTGCCCTAGCGATTTCGTCGCCGATTCGATCGGCGTTCGCTCTCGGAATGACTCCGGATGCGGCCTGTTGGAG
TGCGATTAAGGCGGTGGGAGGTTGCCAGGACGAGATCGAGACGGCGATGAAGAGGAATGAGATCGAGGTGAGTTATGGTTGTTGCAGAGTGATAATGTATGGACTGCCGG
AGAGATGTGCCGCCGTGGTTTTCTCGTCTGGCGGCGAGTTTTCGCCGGAGATTGGCGGCGCGGTGAAGGAATATTGCGACGGAATGGGAGTTACTCCGCCGGTGCTCGAA
GAGGATGATAAGGTTGAAGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
GAAACAAAGGCAACGAGGACCCAGACCAGGCACCAGGAGATATCGAAAGAGTAATGTCAAATCTCGAACCTGAGACCTTGAAGAGAGCATACCCTCAAAACTTAAGTCTT
CAACCACCATGTCATCCCTCTCAAGATCAGAGTTGAGCTATCAGTTCACTGTTTTCCTTAGGCATACAAAAATATTTGAGCAATTAAAGACGCAACGACGGAAGGAACAA
ACGTAAGAACGTGAAATTCAGCCAAAAGGCGAAACCGAAACCAAACGAGAAAGTGTTGAAAGACATTAAAACTTGCAGAAACGAAACTCATCGGCACGAATTGAATGCAA
TCGCAACCAGCAGAGAAGAATTAAACCAAACGCACAAAACGAAACAGAATCCATATCCAATTTCATATATAAAACACACCAAATCGAAGAAGGCGTACCAGTTCAATCGA
GGATCACAGGAGGAGATCGAGATAAGATCTGAAGATGCCGAACTCGGTTCCCAAAATCGTCTCCCTCCTCTTTGCCCTAGCGATTTCGTCGCCGATTCGATCGGCGTTCG
CTCTCGGAATGACTCCGGATGCGGCCTGTTGGAGTGCGATTAAGGCGGTGGGAGGTTGCCAGGACGAGATCGAGACGGCGATGAAGAGGAATGAGATCGAGGTGAGTTAT
GGTTGTTGCAGAGTGATAATGTATGGACTGCCGGAGAGATGTGCCGCCGTGGTTTTCTCGTCTGGCGGCGAGTTTTCGCCGGAGATTGGCGGCGCGGTGAAGGAATATTG
CGACGGAATGGGAGTTACTCCGCCGGTGCTCGAAGAGGATGATAAGGTTGAAGAAAATTGAGTGTTGAATACTTCGTGATTTTGTTTTACATTTATATTTAAATGAAATG
TAAGTGTAAGTGCATATACTATGCTCTAACACAAAGTATGCATTATATCTTACCAGTGA
Protein sequenceShow/hide protein sequence
MPNSVPKIVSLLFALAISSPIRSAFALGMTPDAACWSAIKAVGGCQDEIETAMKRNEIEVSYGCCRVIMYGLPERCAAVVFSSGGEFSPEIGGAVKEYCDGMGVTPPVLE
EDDKVEEN