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Sed0023478 (gene) of Chayote v1 genome

Gene IDSed0023478
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG04:47046872..47047381
RNA-Seq ExpressionSed0023478
SyntenySed0023478
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049710.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]1.9e-3478.57Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        M +R LLKRN+GVS +PKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLCQTEEEFGY HPMGGLTIHCRDDIF + IS +N++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]1.0e-3590Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQ
        MGIRQLLKRNQGVSTIPKGYCAVYVGE+QKKRFVIPIT+LNQ CFQELL QTEE+FGY HPMGGLTIHCRDDIFTD+IS+
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQ

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]1.6e-3379.76Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        M +  LLKR+QGVS+IPKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL QTEEEFGY HPMGGLTIHC+D IFT++IS+LN++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.4e-2976.19Show/hide
Query:  MGIRQLLKR--NQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLN
        M I QLL+R   +GV+ +PKGYCAVYVGE QKKRFVIP+TYLNQPCFQ LL Q EEEFGY HPMGGLTI CR+DIFT++ISQLN
Subjt:  MGIRQLLKR--NQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.3e-3888.1Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        MG+RQLLKRNQGVS +PKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLCQ EEEFGY HPMGGLTIHCRDDIFTD+IS+LN++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein7.5e-3783.33Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        M ++ LLKRNQGVS +PKGYCAVYVGESQKKRFVIPITYLN+PCFQ+LLCQTEEEFGY HPMGGLTIHCRDDIFTD+IS +N++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

A0A0A0K5U4 Uncharacterized protein7.8e-3479.76Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        M +  LLKR+QGVS+IPKGYCAVYVGESQKKRF+IPI+YLNQPCFQELL QTEEEFGY HPMGGLTIHC+D IFT++IS+LN++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

A0A0A0K5V1 Uncharacterized protein8.1e-3175Show/hide
Query:  MGIRQLLKR-----NQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNE
        MG+R+LL+R     NQ VS +PKGYCAVYVGE+QKKRFVIPITYLNQPCFQ+LL QT EEF Y HPMGGLT HC DDIF D+IS LNE
Subjt:  MGIRQLLKR-----NQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNE

A0A5A7U363 Auxin-induced protein 15A-like9.2e-3578.57Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        M +R LLKRN+GVS +PKGYCAVYVG+SQKKRF+IPI YLN+PCFQELLCQTEEEFGY HPMGGLTIHCRDDIF + IS +N++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

A0A6J1C4W2 auxin-responsive protein SAUR24-like6.2e-3988.1Show/hide
Query:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM
        MG+RQLLKRNQGVS +PKGYCAVYVGESQKKRFVIPI+YLNQPCFQELLCQ EEEFGY HPMGGLTIHCRDDIFTD+IS+LN++
Subjt:  MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEM

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR235.0e-2257.5Show/hide
Query:  RQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLN
        +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+L+
Subjt:  RQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLN

Q9FJF7 Auxin-responsive protein SAUR227.8e-2356.1Show/hide
Query:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL
        +G +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ S+L
Subjt:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL

Q9FJG0 Auxin-responsive protein SAUR203.0e-2256.79Show/hide
Query:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQ
        +G +++L R+    S  PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+
Subjt:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQ

Q9FJG1 Auxin-responsive protein SAUR195.0e-2254.88Show/hide
Query:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL
        +G +++L R+    S  PKG+ AVYVGESQKKR+++P++YL+QP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+L
Subjt:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL

Q9FK62 Auxin-responsive protein SAUR242.7e-2357.32Show/hide
Query:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL
        +G +++L R+ G  S  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+L
Subjt:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL

Arabidopsis top hitse value%identityAlignment
AT5G18010.1 SAUR-like auxin-responsive protein family3.6e-2354.88Show/hide
Query:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL
        +G +++L R+    S  PKG+ AVYVGESQKKR+++P++YL+QP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+L
Subjt:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL

AT5G18020.1 SAUR-like auxin-responsive protein family2.1e-2356.79Show/hide
Query:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQ
        +G +++L R+    S  PKG+ AVYVGESQKKR+++PI+YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+
Subjt:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQ

AT5G18050.1 SAUR-like auxin-responsive protein family5.5e-2456.1Show/hide
Query:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL
        +G +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++E+EFG+ HPMGGLTI C +D F ++ S+L
Subjt:  MGIRQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL

AT5G18060.1 SAUR-like auxin-responsive protein family3.6e-2357.5Show/hide
Query:  RQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLN
        +++L R+   VS  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+L+
Subjt:  RQLLKRN-QGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLN

AT5G18080.1 SAUR-like auxin-responsive protein family1.9e-2457.32Show/hide
Query:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL
        +G +++L R+ G  S  PKG+ AVYVGESQKKR+++P++YLNQP FQ LL ++EEEFG+ HPMGGLTI C +D F ++ S+L
Subjt:  MGIRQLLKRNQGV-STIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGCCAACTTCTTAAAAGAAACCAAGGAGTTTCAACAATTCCCAAGGGCTATTGTGCTGTATATGTTGGAGAGAGCCAAAAGAAGCGGTTCGTGATTCCAAT
TACTTACTTGAATCAACCTTGTTTTCAAGAGTTGCTTTGTCAGACTGAAGAAGAATTCGGCTACCGTCATCCCATGGGCGGTCTTACTATTCACTGCAGAGACGACATCT
TCACCGATATCATCTCACAGTTGAATGAGATGCATTGA
mRNA sequenceShow/hide mRNA sequence
CAAGTCTTCACATCCTCATTCACAAAGAAACTTTTCATCTCTCAAAACTTGTTGTATACAACATGGGAATTCGCCAACTTCTTAAAAGAAACCAAGGAGTTTCAACAATT
CCCAAGGGCTATTGTGCTGTATATGTTGGAGAGAGCCAAAAGAAGCGGTTCGTGATTCCAATTACTTACTTGAATCAACCTTGTTTTCAAGAGTTGCTTTGTCAGACTGA
AGAAGAATTCGGCTACCGTCATCCCATGGGCGGTCTTACTATTCACTGCAGAGACGACATCTTCACCGATATCATCTCACAGTTGAATGAGATGCATTGACATTTGTAGC
ATACATTAATATTGTAGAATAGAGGCATAGATACAATTGTACATGTTTGTTCATTTCTTCAATTTTTTGTTTCCTTCATTTGGGAGTAAATATGTTTCCCTACATGAGGA
AATTATGAAGGATGAAAATGAAATGGCTACAGCTTTACTGGAAATGGAAGAGGTTCAATCTTTCCTTCAA
Protein sequenceShow/hide protein sequence
MGIRQLLKRNQGVSTIPKGYCAVYVGESQKKRFVIPITYLNQPCFQELLCQTEEEFGYRHPMGGLTIHCRDDIFTDIISQLNEMH