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Sed0023481 (gene) of Chayote v1 genome

Gene IDSed0023481
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationLG12:31231194..31232460
RNA-Seq ExpressionSed0023481
SyntenySed0023481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]9.0e-0774.29Show/hide
Query:  SCCD-ADTGPGPYPIAPPMCDPMQHGRSQPYPSIL
        SCCD ADTGPGPY + PP CDPMQHG++QPYP I+
Subjt:  SCCD-ADTGPGPYPIAPPMCDPMQHGRSQPYPSIL

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]1.0e-0579.31Show/hide
Query:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL
        DTGPGPY +APPMCDPMQHG++QPYP I+
Subjt:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]7.2e-0445.71Show/hide
Query:  MCDPMQHGRSQPYPSIL--------------------------YWLVLLLLPRYLLLRVDGPSKGHLAPA
        MCDPMQHG+SQPY SI+                            LVLLLLPRYLLL ++ P K H APA
Subjt:  MCDPMQHGRSQPYPSIL--------------------------YWLVLLLLPRYLLLRVDGPSKGHLAPA

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]5.5e-1252.44Show/hide
Query:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL--------------------------YWLVLLLLPRYLLLRVDGPSKGHLAPA
        DTGPGPYP+APPMCDPMQHG+SQPY SI+                            LVLLLLPRYLLL ++ P K H APA
Subjt:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL--------------------------YWLVLLLLPRYLLLRVDGPSKGHLAPA

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]9.0e-0786.21Show/hide
Query:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL
        DTGPGPYP+APPMCDPMQHG+SQPY SI+
Subjt:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein4.8e-0679.31Show/hide
Query:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL
        DTGPGPY +APPMCDPMQHG++QPYP I+
Subjt:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL

A0A5A7UV38 Uncharacterized protein4.4e-0774.29Show/hide
Query:  SCCD-ADTGPGPYPIAPPMCDPMQHGRSQPYPSIL
        SCCD ADTGPGPY + PP CDPMQHG++QPYP I+
Subjt:  SCCD-ADTGPGPYPIAPPMCDPMQHGRSQPYPSIL

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like4.4e-0786.21Show/hide
Query:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL
        DTGPGPYP+APPMCDPMQHG+SQPY SI+
Subjt:  DTGPGPYPIAPPMCDPMQHGRSQPYPSIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCCTTGCTCCTCCATTTGACTTTACACATATTCACCTTGAGGCAGTTGAGCAGTATTAAGAATGTATCTTGTTATTATGCTGTTGGAGTTATAATTTTGGTGGT
GTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTACCCAATTGCCCCACCTATGTGTGATCCAATGCAACATGGTCGGTCTCAGCCATACCCTTCAATTCTGTACTGGC
TTGTGTTGCTACTGCTGCCTAGATATCTGCTTCTAAGGGTGGATGGTCCTAGCAAGGGACACTTAGCCCCTGCATTTCCTACTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCCTTGCTCCTCCATTTGACTTTACACATATTCACCTTGAGGCAGTTGAGCAGTATTAAGAATGTATCTTGTTATTATGCTGTTGGAGTTATAATTTTGGTGGT
GTCTTGCTGTGATGCAGATACTGGACCAGGTCCTTACCCAATTGCCCCACCTATGTGTGATCCAATGCAACATGGTCGGTCTCAGCCATACCCTTCAATTCTGTACTGGC
TTGTGTTGCTACTGCTGCCTAGATATCTGCTTCTAAGGGTGGATGGTCCTAGCAAGGGACACTTAGCCCCTGCATTTCCTACTGTCTGA
Protein sequenceShow/hide protein sequence
MFALLLHLTLHIFTLRQLSSIKNVSCYYAVGVIILVVSCCDADTGPGPYPIAPPMCDPMQHGRSQPYPSILYWLVLLLLPRYLLLRVDGPSKGHLAPAFPTV