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Sed0023520 (gene) of Chayote v1 genome

Gene IDSed0023520
OrganismSechium edule (Chayote v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationLG08:37782668..37786328
RNA-Seq ExpressionSed0023520
SyntenySed0023520
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599102.1 Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2588.89Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA E K  TEEVK+DLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQL+RELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

XP_004152470.1 protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus]4.7e-2693.15Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA ESKT TEEVKIDLFEDDDEFEEFEINEEWE+K EGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

XP_022923645.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata]4.7e-2693.15Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA E+KT TEEVKIDLFEDDDEFEEFEINEEWEVK EGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

XP_022999790.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]1.2e-2690.28Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA E K  TEEVK+DLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQL+RELESN+EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

XP_038893721.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida]6.1e-2691.78Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA ESKT TEEVK+DLFEDDDEFEEFEINEEWEVK EGKE+TQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

TrEMBL top hitse value%identityAlignment
A0A0A0LU33 Uncharacterized protein2.3e-2693.15Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA ESKT TEEVKIDLFEDDDEFEEFEINEEWE+K EGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

A0A5A7UJ57 Putative 26S proteasome complex subunit sem1-12.3e-2693.15Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA ESKT TEEVKIDLFEDDDEFEEFEINEEWE+K EGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

A0A6J1ECF8 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like2.3e-2693.15Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA E+KT TEEVKIDLFEDDDEFEEFEINEEWEVK EGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

A0A6J1KGG4 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like2.3e-2693.15Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA E+KT TEEVKIDLFEDDDEFEEFEINEEWEVK EGKEITQQWEDDWDDDDVNDDFSLQLRRELESN EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVK-EGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

A0A6J1KGK6 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like6.0e-2790.28Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MA E K  TEEVK+DLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQL+RELESN+EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM13.3e-0652.54Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QLR ELE +
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN

P60897 26S proteasome complex subunit SEM13.3e-0652.54Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QLR ELE +
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN

Q3ZBR6 26S proteasome complex subunit SEM13.3e-0652.54Show/hide
Query:  EEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN
        + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QLR ELE +
Subjt:  EEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESN

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V8.9e-2071.23Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MAAE K   E VK+DLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QL++ELE+  EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)1.4e-2074.32Show/hide
Query:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MAAE K  T E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Subjt:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)9.8e-2274.32Show/hide
Query:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MAAE K  T E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Subjt:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)9.8e-2274.32Show/hide
Query:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MAAE K  T E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS QLR+ELE+  +KK
Subjt:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)1.0e-1547.83Show/hide
Query:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF
        MAAE K  T E VK+DLFEDDDEFEEFEINE                                         +W E +E KE++QQWEDDWDDDDVNDDF
Subjt:  MAAESKTVTEE-VKIDLFEDDDEFEEFEINE-----------------------------------------EW-EVKEGKEITQQWEDDWDDDDVNDDF

Query:  SLQLRRELESNIEKK
        S QLR+ELE+  +KK
Subjt:  SLQLRRELESNIEKK

AT5G45010.1 DSS1 homolog on chromosome V6.3e-2171.23Show/hide
Query:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK
        MAAE K   E VK+DLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS QL++ELE+  EKK
Subjt:  MAAESKTVTEEVKIDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTGAATCCAAAACTGTGACGGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGG
TAAGGAAATTACGCAGCAGTGGGAAGACGACTGGGACGACGATGATGTCAACGACGACTTCTCTTTGCAGCTTCGGAGAGAATTGGAGAGCAATATCGAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
CTCAAGAACGCGACACTGCGTAAGCGCCTTGACCTAATAATTAGGGCTAAGCATCCATTTGCTGAACCACCAAAATTCTTTCACTTTGCTTTCTGGTTCTCGTCCGCCTC
CTCGTAGAACCAAGTTTGAACTTTGTGATGGCGGCTGAATCCAAAACTGTGACGGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGAT
TAATGAAGAGTGGGAAGTCAAAGAAGGTAAGGAAATTACGCAGCAGTGGGAAGACGACTGGGACGACGATGATGTCAACGACGACTTCTCTTTGCAGCTTCGGAGAGAAT
TGGAGAGCAATATCGAGAAGAAATGAGAGTCTTGTATGTTTTCATCCTTCAAGATATACGTTTTAGCTATGTCTTTTGATCCCCAGTGTCGTCTTTCTCTACCATTGTAA
ATGGTGGGAATTATGAACATGGTTAGAAGCCTATAACATCGTTACCACATTTCAGATGAGAACATTGGATAATTGTGACCTTTGACACTGAAGAAAACATCTTTCTTTTT
GTTGCTGTCACTTGTCAGGAACCATGATCTTCTTTCACCAATCTTATCATGATTTCTTTAAA
Protein sequenceShow/hide protein sequence
MAAESKTVTEEVKIDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLRRELESNIEKK