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Sed0023540 (gene) of Chayote v1 genome

Gene IDSed0023540
OrganismSechium edule (Chayote v1)
DescriptionRNase III domain-containing protein
Genome locationLG06:45833599..45838088
RNA-Seq ExpressionSed0023540
SyntenySed0023540
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581854.1 hypothetical protein SDJN03_21856, partial [Cucurbita argyrosperma subsp. sororia]6.8e-11284.58Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR +YNPNAP+NPNKKP SLS+ SP S+  GNAT TATNIRT QIVS+LLKRR P   EG K+VEP+GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAY+GDCIYELYARRHFLFP LNIEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EES+S QPSK GD+D++
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

XP_008447605.1 PREDICTED: uncharacterized protein LOC103490018 [Cucumis melo]3.6e-11385.77Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR SYNPNAP+NPNKKPNSLS PSP S+  GNAT TATNIRT QIVS+LL RR  S IEGCK  EP+GLYLG ++WLP+PPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAYIGDCIYELYARRHFLFPPL+IEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLISEES+S QP  LGDE+ S
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

XP_022956334.1 uncharacterized protein LOC111458065 [Cucurbita moschata]3.4e-11184.19Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR +YNPNA +NPNKKP SLS+ SP S+  GNAT TATNIRT QIVS+LLKRR P   EG K+VEP+GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAY+GDCIYELYARRHFLFP LNIEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNV+RLDEIM+KLGFSTDSSLQLI EES+S QPSK GDED++
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

XP_022980704.1 uncharacterized protein LOC111479993 [Cucurbita maxima]1.5e-11184.58Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR +YNPNAP+NPNKKP SLS+ SP S+  G AT TATNIRT QIVS+LLKRR P   EG K+VEP+GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAY+GDCIYELYARRHFLFP LNIEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EES+S QPSK GDED++
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

XP_023526365.1 uncharacterized protein LOC111789879 [Cucurbita pepo subsp. pepo]8.8e-11284.58Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR +YNPNAP+NPNKKP SLS+ SP S+  GNAT TATNIRT QIVS+LLKRR P   EG K+VEP+GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAY+GDCIYELYARRHFLFP L+IEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EES+S QPSK GDED++
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

TrEMBL top hitse value%identityAlignment
A0A0A0LDF2 RNase III domain-containing protein8.3e-10885.77Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR SYNPNAP+NPNKKP S S  SP S+  GNA  TATNIRT QIVS+LL RR PS IEGCK  EP+GLYLG ++WLP+PPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAYIGDCIYELYARRHFLFPPL+IEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEES
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQ+ISEES
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEES

A0A1S3BIG3 uncharacterized protein LOC1034900181.7e-11385.77Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR SYNPNAP+NPNKKPNSLS PSP S+  GNAT TATNIRT QIVS+LL RR  S IEGCK  EP+GLYLG ++WLP+PPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAYIGDCIYELYARRHFLFPPL+IEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLISEES+S QP  LGDE+ S
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

A0A6J1D2Y6 uncharacterized protein LOC111016851 isoform X14.4e-10984.58Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTSVVASWDTQQR SYNPNAP+ P KKP++L+L SP S+  GN T  A N+R  QIVS+LLKRR PSPIEG K VEP GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAYIGDCIYELYARRHFLFPPLNIEE+NDRVMAVVRCEAQD+LLQKLLNDNFLT AERDILRWGKNVGSS KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLISEES+S Q  KLGD DKS
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

A0A6J1GYR2 uncharacterized protein LOC1114580651.6e-11184.19Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR +YNPNA +NPNKKP SLS+ SP S+  GNAT TATNIRT QIVS+LLKRR P   EG K+VEP+GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAY+GDCIYELYARRHFLFP LNIEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNV+RLDEIM+KLGFSTDSSLQLI EES+S QPSK GDED++
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

A0A6J1J002 uncharacterized protein LOC1114799937.3e-11284.58Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK
        M TL ATSTS+VASWDTQQR +YNPNAP+NPNKKP SLS+ SP S+  G AT TATNIRT QIVS+LLKRR P   EG K+VEP+GLYLG E+WLPNPPK
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPK

Query:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS
        VQKPRSVFNAA+LAY+GDCIYELYARRHFLFP LNIEE+NDRVMAVVRCEAQDVLLQKLLNDNFLT AERDILRWGKNVGSS+KTRTKKRAGAAVYNRAS
Subjt:  VQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS
        SLETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EES+S QPSK GDED++
Subjt:  SLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS

SwissProt top hitse value%identityAlignment
P74327 Mini-ribonuclease 39.1e-1943.2Show/hide
Query:  NPPKVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVY
        NP      +S+ +   LAY+GD ++ELY R  +LFPP  I +F+ RV+A VR E Q  +L  LL    LT+ E++ +R G+N  +S    T +RA   +Y
Subjt:  NPPKVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVY

Query:  NRASSLETLIGYLYLNNVKRLDEIM
          AS LETL+GYLYL + +RLDE++
Subjt:  NRASSLETLIGYLYLNNVKRLDEIM

Q05370 Mini-ribonuclease 31.1e-1137.72Show/hide
Query:  ATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIGYLY
        + LAY GD +YEL+ R  FL PP  I  ++ +V+A VR E+Q   +  L      T AE  I R G+N  +       KR  A +Y +A+  E L+GYLY
Subjt:  ATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIGYLY

Query:  LNNVKRLDEIMEKL
        L + +RL +++  L
Subjt:  LNNVKRLDEIMEKL

Q5N0K8 Mini-ribonuclease 32.4e-1137.5Show/hide
Query:  LAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIGYLYLN
        LAY+GD +YE + R   L P     + +  V+  VR E Q  LL  LL    LT  E +I+R G+N       R  +R     Y +A+ LETL+GYLYL 
Subjt:  LAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIGYLYLN

Query:  NVKRLDEIMEKL
        + +RL  ++++L
Subjt:  NVKRLDEIMEKL

Q81J58 Mini-ribonuclease 35.9e-1036.75Show/hide
Query:  NAATLAYIGDCIYELYARRHFLFP-PLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIG
        N+  LAY+GD +YE Y R H L    +   + +    + V  +AQ  ++  LL   FLT  E  +LR G+N  S T     K      Y  +++ E LIG
Subjt:  NAATLAYIGDCIYELYARRHFLFP-PLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIG

Query:  YLY-LNNVKRLDEIMEK
        Y + LNN +RLDEI+ K
Subjt:  YLY-LNNVKRLDEIMEK

Q8DLQ0 Mini-ribonuclease 31.2e-1536.25Show/hide
Query:  LGLEEWLP-NPPKVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRT
        L   E LP  PP +  P      A LAY GD +YEL+ R  FL PP  I  ++ +V+A VR E+Q   +  L    + T  ER I R G+N  +      
Subjt:  LGLEEWLP-NPPKVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRT

Query:  KKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKL
         KR  A +Y +A+  E L+GYLYL N +RL EI + L     S ++  +  ++S  PS++
Subjt:  KKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPSKL

Arabidopsis top hitse value%identityAlignment
AT1G55140.1 Ribonuclease III family protein6.8e-7061.38Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPI-EGCKAVEPNGLYLGLEEWLPNPP
        M  L A+ST V A+ DTQ +  YNPNAP+N  KK ++LS   PPS P  +++S ATN+  +  VS+LLKR     I +G      +   +G E+W P+PP
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPI-EGCKAVEPNGLYLGLEEWLPNPP

Query:  KVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRA
        KV+KPRSVFNAA+LAYIGD IYE+YARRHFLFPPL+IEE+NDRV AVVRCEAQ  LLQKL++D+FLT  ERDILRWGKNVG S KTR+ +RAG AVYN+A
Subjt:  KVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRA

Query:  SSLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPS
        SSLETLIGYLYL+N KRL+E+M+KLGFS+ SS + + +E+ S +PS
Subjt:  SSLETLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESDSVQPS

AT1G55140.2 Ribonuclease III family protein9.3e-4357.3Show/hide
Query:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPI-EGCKAVEPNGLYLGLEEWLPNPP
        M  L A+ST V A+ DTQ +  YNPNAP+N  KK ++LS   PPS P  +++S ATN+  +  VS+LLKR     I +G      +   +G E+W P+PP
Subjt:  MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPI-EGCKAVEPNGLYLGLEEWLPNPP

Query:  KVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGK
        KV+KPRSVFNAA+LAYIGD IYE+YARRHFLFPPL+IEE+NDRV AVVRCEAQ  LLQKL++D+FLT  ER I   G+
Subjt:  KVQKPRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGK

AT3G13740.1 Ribonuclease III family protein2.2e-6859.49Show/hide
Query:  LLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPKVQK
        +L+ S++V A+ DTQ R  YNPNAP+   K PN  S   PPS       S +        V++LLKR  PS  E    V+ +  Y+G E W P+PPK++K
Subjt:  LLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPKVQK

Query:  PRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLE
        PRSVFN A+LA+IGD IYELYARRHFLFPPL+IE++NDRV AVVRCEAQ  LL KL++D+FLT  ERDILRWGKN+GS+ +TRT++RAG AVYN+ASSLE
Subjt:  PRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLE

Query:  TLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESD
        TLIGYLYL N KRL++IMEKLGFS+DSS +++ EE++
Subjt:  TLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESD

AT3G13740.2 Ribonuclease III family protein8.1e-6356.96Show/hide
Query:  LLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPKVQK
        +L+ S++V A+ DTQ R  YNPNAP+   K PN  S   PPS       S +        V++LLKR  PS  E    V+ +  Y+G E W P+PPK++K
Subjt:  LLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPKVQK

Query:  PRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLE
        PRSVFN A+LA+IGD IYELYARRHFLFPPL+IE++NDRV AV        LL KL++D+FLT  ERDILRWGKN+GS+ +TRT++RAG AVYN+ASSLE
Subjt:  PRSVFNAATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLE

Query:  TLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESD
        TLIGYLYL N KRL++IMEKLGFS+DSS +++ EE++
Subjt:  TLIGYLYLNNVKRLDEIMEKLGFSTDSSLQLISEESD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTTTATTGGCGACTTCGACGAGCGTGGTTGCGTCATGGGACACCCAACAGAGACCTTCGTACAATCCCAATGCCCCCAAAAACCCTAACAAGAAACCCAATTC
CCTATCTCTCCCGTCGCCGCCGTCGAAACCCGCCGGAAACGCTACCTCAACCGCCACCAACATTCGAACCACCCAAATTGTCTCCGAGCTTCTCAAGCGACGCATTCCCA
GCCCAATTGAAGGCTGCAAAGCAGTGGAACCAAATGGCCTCTATTTGGGATTGGAAGAGTGGTTGCCAAATCCACCGAAGGTGCAGAAACCCCGATCTGTGTTCAATGCA
GCTACATTAGCATATATTGGAGATTGCATCTATGAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCGTTGAATATCGAAGAATTCAACGACCGTGTTATGGCTGTTGT
ACGTTGCGAAGCACAAGATGTTCTACTCCAGAAACTTCTAAATGATAATTTCTTAACAAATGCAGAGAGGGACATCCTTCGATGGGGAAAAAATGTCGGTTCCTCCACGA
AAACACGTACAAAAAAACGTGCAGGTGCAGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAAATC
ATGGAAAAGCTCGGTTTCTCAACTGATTCATCCTTGCAATTGATTTCGGAGGAATCAGATAGCGTTCAACCAAGCAAGTTAGGAGATGAAGACAAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAATGCAAACTTTATTGGCGACTTCGACGAGCGTGGTTGCGTCATGGGACACCCAACAGAGACCTTCGTACAATCCCAATGCCCCCAAAAACCCTAACAAGAAACCCAA
TTCCCTATCTCTCCCGTCGCCGCCGTCGAAACCCGCCGGAAACGCTACCTCAACCGCCACCAACATTCGAACCACCCAAATTGTCTCCGAGCTTCTCAAGCGACGCATTC
CCAGCCCAATTGAAGGCTGCAAAGCAGTGGAACCAAATGGCCTCTATTTGGGATTGGAAGAGTGGTTGCCAAATCCACCGAAGGTGCAGAAACCCCGATCTGTGTTCAAT
GCAGCTACATTAGCATATATTGGAGATTGCATCTATGAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCGTTGAATATCGAAGAATTCAACGACCGTGTTATGGCTGT
TGTACGTTGCGAAGCACAAGATGTTCTACTCCAGAAACTTCTAAATGATAATTTCTTAACAAATGCAGAGAGGGACATCCTTCGATGGGGAAAAAATGTCGGTTCCTCCA
CGAAAACACGTACAAAAAAACGTGCAGGTGCAGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAA
ATCATGGAAAAGCTCGGTTTCTCAACTGATTCATCCTTGCAATTGATTTCGGAGGAATCAGATAGCGTTCAACCAAGCAAGTTAGGAGATGAAGACAAGAGCTGATCATC
GTCGAGCTAAACCACGGTACAGCACTTGTACTTCAAAATGGTTTAATCCACTGATGTCTTTTACTATCGATCAGATATCAATATTTGTTGCTGCTGGCTCTGCTGCTCTC
TGTTCATCTTAGGCTAGTCTTTCCTATTCATAAAGTTTTGTGCAAATAGGTGTATTCAGTTGACATTTGTGATTTTTAGTTATCTTCTTCTTGTACTTTGTGGGAGTTCT
GTAAATTATGCTATAAAAATGAATCTCATCCCACTTACCATGTTGTATTATGATGATTTCTTCAATTTCTATCTTTAGCAACATAGTATTGTAATACAGATATTACAATT
AACACCTTATGGGAGATCTTTGCCCTTATGGTTTATAAAGTTTGGAGTT
Protein sequenceShow/hide protein sequence
MQTLLATSTSVVASWDTQQRPSYNPNAPKNPNKKPNSLSLPSPPSKPAGNATSTATNIRTTQIVSELLKRRIPSPIEGCKAVEPNGLYLGLEEWLPNPPKVQKPRSVFNA
ATLAYIGDCIYELYARRHFLFPPLNIEEFNDRVMAVVRCEAQDVLLQKLLNDNFLTNAERDILRWGKNVGSSTKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEI
MEKLGFSTDSSLQLISEESDSVQPSKLGDEDKS