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Sed0023541 (gene) of Chayote v1 genome

Gene IDSed0023541
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:23836995..23837445
RNA-Seq ExpressionSed0023541
SyntenySed0023541
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR62900.1 hypothetical protein CICLE_v10017350mg [Citrus clementina]6.6e-0764Show/hide
Query:  NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        + +WKFL   KWKRLNL I F D ++F+IVSVFEA+ L+A A FFFLCCG
Subjt:  NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG

KAG6581417.1 hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1469.12Show/hide
Query:  MDDTIDTKNAKKTKN---KRRSFNFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFF
        MDD ID K  KK +    +R   ++KWKFL+DFKWKRLNLHIGFLDAIIFRI S+FEAI LI IAGFF
Subjt:  MDDTIDTKNAKKTKN---KRRSFNFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFF

KAG7034699.1 hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1972.37Show/hide
Query:  MDDTIDTKNAKKTKN---KRRSFNFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCR
        MDD ID K  KK +    +R   ++KWKFL+DFKWKRLNLHIGFLDAIIFRI S+FEAI LI IAGFFFLCCGGCR
Subjt:  MDDTIDTKNAKKTKN---KRRSFNFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCR

KGN49382.1 hypothetical protein Csa_004198 [Cucumis sativus]9.1e-1762.82Show/hide
Query:  MDDTIDTKNAKKTKNKRRSF-----NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCR
        MDD ID K  K  K +  SF     ++KWKFL++FKWKRLNL +GF DAIIFRIVS+FE + L+ IA FFFLCCGGCR
Subjt:  MDDTIDTKNAKKTKNKRRSF-----NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCR

XP_023929751.1 uncharacterized protein LOC112041078 [Quercus suber]1.0e-0764Show/hide
Query:  FKWKFLRD-FKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        ++WKFL   FKWKRLNLH+ F+D ++FRI+SVFEAI L+A   FF+LCCG
Subjt:  FKWKFLRD-FKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG

TrEMBL top hitse value%identityAlignment
A0A067GHI9 Uncharacterized protein3.2e-0764Show/hide
Query:  NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        + +WKFL   KWKRLNL I F D ++F+IVSVFEA+ L+A A FFFLCCG
Subjt:  NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG

A0A0A0KLX9 Uncharacterized protein4.4e-1762.82Show/hide
Query:  MDDTIDTKNAKKTKNKRRSF-----NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCR
        MDD ID K  K  K +  SF     ++KWKFL++FKWKRLNL +GF DAIIFRIVS+FE + L+ IA FFFLCCGGCR
Subjt:  MDDTIDTKNAKKTKNKRRSF-----NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCR

A0A2C9UGA8 Uncharacterized protein3.5e-0652.83Show/hide
Query:  SFNFKWKFLRD-FKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        S+ ++W+FL   FKWKR++  + F D ++F+IVSVFEA+ L+A   FFFLCCG
Subjt:  SFNFKWKFLRD-FKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG

A0A7N2LSF8 Uncharacterized protein5.4e-0756.9Show/hide
Query:  KNKRRSFNFKWKFLRD-FKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        K  R    ++WKFL   FKWKRLNL + F+D ++FRI+SVFEAI L+A   FF+LCCG
Subjt:  KNKRRSFNFKWKFLRD-FKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG

V4UFE9 Uncharacterized protein3.2e-0764Show/hide
Query:  NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        + +WKFL   KWKRLNL I F D ++F+IVSVFEA+ L+A A FFFLCCG
Subjt:  NFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46295.1 unknown protein2.7e-0655Show/hide
Query:  KWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG
        KWKRLNL + FL+ + +RI+S+ EA+ L++   FFFLCCG
Subjt:  KWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATACAATTGATACGAAGAACGCGAAGAAGACGAAGAACAAGAGAAGATCATTCAATTTCAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGAGGTTGAATCT
GCACATTGGATTCTTAGATGCAATAATCTTCAGAATCGTTTCTGTGTTTGAAGCCATTGGGTTGATAGCCATTGCCGGTTTCTTCTTCCTATGTTGTGGCGGATGTCGAC
TATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATACAATTGATACGAAGAACGCGAAGAAGACGAAGAACAAGAGAAGATCATTCAATTTCAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGAGGTTGAATCT
GCACATTGGATTCTTAGATGCAATAATCTTCAGAATCGTTTCTGTGTTTGAAGCCATTGGGTTGATAGCCATTGCCGGTTTCTTCTTCCTATGTTGTGGCGGATGTCGAC
TATGATCTATTCTACCCGACTCGATTGATTGGTTTGTATGTCATTACGAATTCGCAACTAACCCAATCTTGTATGGTATTGTTGTACAGTTTATTTTCTTCAAATCATCC
TTAATTCGTTCATTTTTTGTCTCTGAATGTTAATAATACAGACATCCATCTCAAAAATGTTTAGTGACAAGAGTAGGTACCGATACTCCTCAAAATTGTACCTCTTTTAA
CTTCATCGATT
Protein sequenceShow/hide protein sequence
MDDTIDTKNAKKTKNKRRSFNFKWKFLRDFKWKRLNLHIGFLDAIIFRIVSVFEAIGLIAIAGFFFLCCGGCRL