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Sed0023571 (gene) of Chayote v1 genome

Gene IDSed0023571
OrganismSechium edule (Chayote v1)
DescriptionHMA domain-containing protein
Genome locationLG08:28333171..28336336
RNA-Seq ExpressionSed0023571
SyntenySed0023571
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581006.1 hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5068.78Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------RGLKKLRAVEDE--------------QAPFESPPVTVPVLP
        MASIS+FP LHS+SRP  A ANP+  PI RPS +L +S+   VSAAS            RGLK++R VE++               +P E P VTVPV  
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------RGLKKLRAVEDE--------------QAPFESPPVTVPVLP

Query:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        SDILTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
Subjt:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

KAG6588977.1 hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5173.63Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF
        MASIS FP  HSISRP T  ANPT  PIFR SISLH+S   AVSAAS            RGLKK RAVE E +         E+P VTV V PSD+LTMF
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF

Query:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        FQAEGTLNESAIPSVTEALEQTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

KAG7015253.1 hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma]6.6e-5274.18Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF
        MASIS FP  HSISRP T  ANPT  PIFR SISLHTS   AVSAAS            RGLKK RAVE E +         E+P VTV V PSD+LTMF
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF

Query:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        FQAEGTLNESAIPSVTEALEQTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

XP_022928515.1 uncharacterized protein LOC111435303 [Cucurbita moschata]8.6e-5273.63Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF
        MASIS FP  HS+SRP T  ANPT  PIFR SISLHTS   AVSAAS            RGLKK RAVE E +         E+P VTV V PSD+LTMF
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF

Query:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        FQAEGTLNESAIPSVTEALEQTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

XP_023529800.1 uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo]1.2e-5072.53Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASITQ---------RGLKKLRAVE------DEQAPFESPP-VTVPVLPSDILTMF
        MASIS FP  HSISRP T  ANPT  P+FR SISLHTS   A SAAS            RGLK  RAVE      +++   E PP VTV V PSD+LTMF
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASITQ---------RGLKKLRAVE------DEQAPFESPP-VTVPVLPSDILTMF

Query:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        FQAEGTLNESAIPSVTEALEQTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

TrEMBL top hitse value%identityAlignment
A0A6J1D9Q3 uncharacterized protein LOC1110183384.8e-4868.65Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASIT-----------QRGLKKLRAVEDEQA------------PFESPPVTVPVLPSDI
        MASIS F  LHSISRP   PANP LI    PSISL TS +S A+ +           +R LK+  AVE++ A            P E P VTVPV PSDI
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASIT-----------QRGLKKLRAVEDEQA------------PFESPPVTVPVLPSDI

Query:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVF
        LTMFFQAEGTLNE+AIPSVTEALEQTEGIT LKV+VVEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  LTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVF

A0A6J1ERV9 uncharacterized protein LOC1114353034.2e-5273.63Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF
        MASIS FP  HS+SRP T  ANPT  PIFR SISLHTS   AVSAAS            RGLKK RAVE E +         E+P VTV V PSD+LTMF
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTS---AVSAASI---------TQRGLKKLRAVEDEQA-------PFESPPVTVPVLPSDILTMF

Query:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        FQAEGTLNESAIPSVTEALEQTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A6J1F3X5 uncharacterized protein LOC1114419461.3e-5068.78Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------RGLKKLRAVEDE--------------QAPFESPPVTVPVLP
        MASIS+FP LHS+SRP  A ANP+  PI RPS +L +S+   VSAAS            RGLK++R VE++               +P E P VTVPV  
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------RGLKKLRAVEDE--------------QAPFESPPVTVPVLP

Query:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        SDILTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
Subjt:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A6J1J0J2 uncharacterized protein LOC1114823591.3e-5068.25Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------RGLKKLRAVEDE--------------QAPFESPPVTVPVLP
        MASIS+FP LHS+SRP  A ANP+  PIFRPS +L +S+   VSAA+            RGLK++R VE++               +P E P VTVPV  
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSA---VSAASITQ---------RGLKKLRAVEDE--------------QAPFESPPVTVPVLP

Query:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        SDILTMFFQAEGTLNESA+PSVTEALEQT+GITGLKVQ+VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSFEDKEEVFV
Subjt:  SDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

A0A6J1JF03 uncharacterized protein LOC1114863048.7e-5070.33Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASIT------------QRGLKKLRAVE------DEQAPFESPP-VTVPVLPSDILTMF
        MASIS FP  HSISRP T  ANPT  P+FR SISLHTS   AA+               RGL+K  AVE      +++   E PP VTV V PSD+LTMF
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASIT------------QRGLKKLRAVE------DEQAPFESPP-VTVPVLPSDILTMF

Query:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        FQAEGTLNESAIPSVTEALEQTEG T LKVQVVEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  FQAEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14910.1 Heavy metal transport/detoxification superfamily protein1.2e-3551.11Show/hide
Query:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVS-------AASITQR--GLKKLRAVED--------EQAPFESPPVTVPVLPSDILTMFFQ
        MASI+   T HS  R  +   + T +     +++  T A+        A  I Q   GL+KL ++ +        E+ P E+  V+VPV PSD+LTMFFQ
Subjt:  MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVS-------AASITQR--GLKKLRAVED--------EQAPFESPPVTVPVLPSDILTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV
        A+GTLNE+AIP+VT AL+  +G++ LKVQV EG+A VEL KQTT+Q+TGVAS+L+ETIQGAGFKLQTLNLSFED +EV V
Subjt:  AEGTLNESAIPSVTEALEQTEGITGLKVQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTCCATCTTCCCCACGCTTCACTCCATTTCACGCCCTCCAACTGCGCCTGCAAATCCAACCCTAATTCCCATTTTCAGACCTTCAATCTCCCTTCACAC
CTCCGCCGTCTCCGCCGCCTCCATCACCCAACGCGGCCTCAAAAAGCTCCGGGCAGTCGAAGACGAGCAAGCGCCGTTCGAGTCGCCGCCGGTCACCGTCCCCGTCTTGC
CCTCTGACATTCTCACCATGTTCTTTCAGGCAGAGGGGACACTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACTGAGGGCATCACCGGGTTGAAG
GTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTTACGAAACAAACAACAATACAATCGACAGGAGTGGCCTCGAGCTTGATCGAAACCATTCAGGGTGCAGGTTTCAA
GTTACAAACATTAAACCTGAGTTTCGAGGACAAGGAAGAGGTTTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
GTTAAACTAAAAAATGAATCCAAAAAAGGAAGAAGTTATTATGGAGCAGGTGGAGTAGTGGATAAGCAGATTAGAAATCCACACATTCAACAAAAATGGCTTCCATCTCC
ATCTTCCCCACGCTTCACTCCATTTCACGCCCTCCAACTGCGCCTGCAAATCCAACCCTAATTCCCATTTTCAGACCTTCAATCTCCCTTCACACCTCCGCCGTCTCCGC
CGCCTCCATCACCCAACGCGGCCTCAAAAAGCTCCGGGCAGTCGAAGACGAGCAAGCGCCGTTCGAGTCGCCGCCGGTCACCGTCCCCGTCTTGCCCTCTGACATTCTCA
CCATGTTCTTTCAGGCAGAGGGGACACTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACTGAGGGCATCACCGGGTTGAAGGTTCAAGTTGTTGAG
GGCATTGCATCTGTTGAGCTTACGAAACAAACAACAATACAATCGACAGGAGTGGCCTCGAGCTTGATCGAAACCATTCAGGGTGCAGGTTTCAAGTTACAAACATTAAA
CCTGAGTTTCGAGGACAAGGAAGAGGTTTTTGTTTAGATTCTCTTGATTTTGAATTGTTAGAATTGAAGGAGAGGGAAAGAGCTTCATTGATTATGTCATAGAAGGTATG
ACTGTGGTGATGGTGAGATCCAACTCAAATGGCCACAGAAGTGTGCTTAAATGTATTATTTTGTTGCCATAGTTTGATTTTTTGTGCATGAAATATGGAGTTGAAGCTTC
ATACGATATAAAAATGGAAAGCATTGCTTTGAAATGTGCTTTAAATAATGAAAAACTACTTGAACA
Protein sequenceShow/hide protein sequence
MASISIFPTLHSISRPPTAPANPTLIPIFRPSISLHTSAVSAASITQRGLKKLRAVEDEQAPFESPPVTVPVLPSDILTMFFQAEGTLNESAIPSVTEALEQTEGITGLK
VQVVEGIASVELTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDKEEVFV