CuGenDBv2

Gene ID	Sed0023592
Organism	Sechium edule (Chayote v1)
Description	Oxysterol-binding protein-related protein 4B-like
Genome location	LG08:3178460..3179301
RNA-Seq Expression	Sed0023592
Synteny	Sed0023592
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587751.1 hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-53

65.59

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+GEF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
         +  + SC  D FEDGR+RF       EF+ S C+P+S    SSSSSS SS+     P AESS H+RLGCGPWRINP +IAIGRRV
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

KAG7021722.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.6e-53

65.41

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+GEF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRR
         +  + SC  D FEDGR+RF       EF+ S C+P+S    SSSSSS SS+     P AESS H+RLGCGPWRINP +IAIGRR
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRR

XP_022930189.1 uncharacterized protein LOC111436686 [Cucurbita moschata]

5.0e-53

65.59

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
         +  + SC  D F DGR+RF       EF+ SPC+P+SSS  SSS SSL        PAAESS H+RLGCGPWRINP +IAIGRRV
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

XP_023007086.1 uncharacterized protein LOC111499680 [Cucurbita maxima]

5.9e-54

66.13

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
         K  + SC  D FEDGR+RF       EF+ SPC+P+SSS  SS+ SSL        PAAESS H+RLGCGPWRINP +IAIGRRV
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

XP_023530969.1 uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]

1.8e-55

67.74

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+ EF+LPL+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK  P TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
         K  + SC  D FEDGRSRF       EF+ SPCQP+S    SSSSSS SS+     PAAESS H+RLGCGPWRINP +IAIGRRV
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LUL8 Uncharacterized protein

1.3e-46

60.44

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Query:  MKDEKDNGE-FILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPK-SPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKR
        MK+EK++ E F+LPL+N PSR+SSMS SSR +YYRRT EGVPFQWEMQPGTPK +PPLTE ILPPISPPPA LSL L KP R   NK  LF+LF PW K+
Subjt:  MKDEKDNGE-FILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPK-SPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKR

Query:  PKPKFGRRSCPLDL-FEDGRSRFEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
        PKPK  +  CPLDL  ++ R RF+   S C+  + S     S+          PA  SSGH RLGCGPWRINP KI +GRRV
Subjt:  PKPKFGRRSCPLDL-FEDGRSRFEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like

7.1e-37

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Query:  MSCSSRLYYYRRTVEGVPFQWEMQPGTPKS-PPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWK--RPKPKFGRRSCPLDLFEDG-RSR
        MS SSR +YYRRT EGVPFQWEMQPGTPKS PPLTE I PPISPPPA LSL   KP RV  NK SLF+LF PW K  +PKPK  +  CPLDL ++  R R
Subjt:  MSCSSRLYYYRRTVEGVPFQWEMQPGTPKS-PPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWK--RPKPKFGRRSCPLDLFEDG-RSR

Query:  FEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
        F+   S C+  + S     SS          P  ESSG  RLGCGPWRINP KI +GRRV
Subjt:  FEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

A0A5N5HD47 Uncharacterized protein

3.2e-21

46.15

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Query:  EFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKP---TRVSLNKHSLFLLFRP--WWKRPKPKF
        EF+   N L + SSS+ CSSR+YY R T EGVPF WE+QPGTP++PP  EAI PPISPPPA LSL LPKP    ++  NK     L R   W K+ K K 
Subjt:  EFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKP---TRVSLNKHSLFLLFRP--WWKRPKPKF

Query:  GRRS--------CPLDLFEDGRSRFEFMDSPCQPESSSFWSSSS--------SSLSSVPANLPPAAESSGHQRLGCGPWRIN
         R++        C  D  E   S  EFM S   P +SS  SSSS        SSL S PA    +  SSGH    C PW+++
Subjt:  GRRS--------CPLDLFEDGRSRFEFMDSPCQPESSSFWSSSS--------SSLSSVPANLPPAAESSGHQRLGCGPWRIN

A0A6J1EQV3 uncharacterized protein LOC111436686

2.4e-53

65.59

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
         +  + SC  D F DGR+RF       EF+ SPC+P+SSS  SSS SSL        PAAESS H+RLGCGPWRINP +IAIGRRV
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

A0A6J1KZJ1 uncharacterized protein LOC111499680

2.9e-54

66.13

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Query:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK
        MKDEKD+ EF+L L+NLPSR SS+ CSSRLYYYRRT EGVPFQWEMQPGTPK PP TEA+   I+PPPAALSL  PKP R    K SLFLLFRPW K+ K
Subjt:  MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPK

Query:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV
         K  + SC  D FEDGR+RF       EF+ SPC+P+SSS  SS+ SSL        PAAESS H+RLGCGPWRINP +IAIGRRV
Subjt:  PKFGRRSCPLDLFEDGRSRF-------EFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)

2.5e-10

59.32

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Query:  SSMSCSSRL-YYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPT
        SS+S +S + YY  R  EGVPF+WEMQPGTP +    E ++PP+SPPPA LSL LPKP+
Subjt:  SSMSCSSRL-YYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPT

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B

2.5e-10

59.32

Show/hide

Query:  SSMSCSSRL-YYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPT
        SS+S +S + YY  R  EGVPF+WEMQPGTP +    E ++PP+SPPPA LSL LPKP+
Subjt:  SSMSCSSRL-YYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPT

AT5G01790.1 unknown protein

2.0e-07

40.54

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Query:  EKDNGEFILPLNNLPSRSSSMSC---SSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLA
        ++D   F   L +   R SS+S    S R+YYY      VPF+WE  PGTPK P      LPP++PPP+  S +
Subjt:  EKDNGEFILPLNNLPSRSSSMSC---SSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLA

Sequences

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CDS sequence

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ATGAAAGACGAGAAAGATAACGGCGAATTTATTTTGCCGTTGAATAATCTTCCGTCAAGAAGCTCTTCCATGAGTTGTTCGTCTCGTTTGTATTACTATAGACGGACCGT
TGAAGGGGTTCCGTTTCAGTGGGAGATGCAACCGGGAACCCCCAAATCGCCGCCGCTCACGGAGGCGATTCTGCCGCCGATCAGTCCTCCGCCGGCTGCCCTCAGCCTTG
CCCTGCCCAAACCGACCCGGGTCAGTCTTAATAAACATTCGTTGTTTCTTTTGTTTAGGCCGTGGTGGAAGCGGCCCAAGCCCAAGTTTGGGAGGCGTTCTTGTCCGTTG
GATCTGTTTGAGGATGGACGTTCCAGATTTGAGTTTATGGATTCGCCATGTCAGCCGGAATCTTCTTCTTTTTGGTCGTCGTCTTCGTCGTCTTTGTCGTCGGTGCCGGC
GAATCTTCCGCCGGCGGCGGAATCTTCCGGTCACCAGCGGTTGGGGTGCGGTCCCTGGAGGATTAATCCTTGTAAAATTGCTATTGGAAGGCGGGTTTGA

mRNA sequence

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ACACCCCCGTCACGTCATATATCCAAATATATATACAAAATCCATTTTTGTAGATTTTGAATTCTTGGTTTCGAAATTATGAAAGACGAGAAAGATAACGGCGAATTTAT
TTTGCCGTTGAATAATCTTCCGTCAAGAAGCTCTTCCATGAGTTGTTCGTCTCGTTTGTATTACTATAGACGGACCGTTGAAGGGGTTCCGTTTCAGTGGGAGATGCAAC
CGGGAACCCCCAAATCGCCGCCGCTCACGGAGGCGATTCTGCCGCCGATCAGTCCTCCGCCGGCTGCCCTCAGCCTTGCCCTGCCCAAACCGACCCGGGTCAGTCTTAAT
AAACATTCGTTGTTTCTTTTGTTTAGGCCGTGGTGGAAGCGGCCCAAGCCCAAGTTTGGGAGGCGTTCTTGTCCGTTGGATCTGTTTGAGGATGGACGTTCCAGATTTGA
GTTTATGGATTCGCCATGTCAGCCGGAATCTTCTTCTTTTTGGTCGTCGTCTTCGTCGTCTTTGTCGTCGGTGCCGGCGAATCTTCCGCCGGCGGCGGAATCTTCCGGTC
ACCAGCGGTTGGGGTGCGGTCCCTGGAGGATTAATCCTTGTAAAATTGCTATTGGAAGGCGGGTTTGAATTTCTTCTTATTTTTCTTAGTATATATATATTTTGTAAATA
AATAAATATTTTTGCGTTCTCCTTTTTCCTTTTAAGTAAAAATATTTTTGTTTTGTGTGGTTTACTTGTTGAAAACTTGAAGTTATGGAGCTCGTAGTTATTTTTTGAAT
ATCGGTATTTTATTTTCATAGTTCAATTATGTGTTGTTACCGGAAAATTAATTCCACGGTCACAAGTTCGAG

Protein sequence

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MKDEKDNGEFILPLNNLPSRSSSMSCSSRLYYYRRTVEGVPFQWEMQPGTPKSPPLTEAILPPISPPPAALSLALPKPTRVSLNKHSLFLLFRPWWKRPKPKFGRRSCPL
DLFEDGRSRFEFMDSPCQPESSSFWSSSSSSLSSVPANLPPAAESSGHQRLGCGPWRINPCKIAIGRRV

Sed0023592 (gene) of Chayote v1 genome