; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023596 (gene) of Chayote v1 genome

Gene IDSed0023596
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG11:922154..923080
RNA-Seq ExpressionSed0023596
SyntenySed0023596
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]6.9e-9262.81Show/hide
Query:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDS
        NREVWS NL  ELEL+ EYL EFP+V ID EFP             EFY CLRFNV+RL+ILQLGLTL D +GNI MTWEFNF+D+D +SDME V+SLDS
Subjt:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDS

Query:  FLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRL
        FLKNKGFDF KL  YGIA E+F TLFLPIC+SG+I +WITFHGFYDI Y++KLL +  +PISM  FA TAQ LLGT+ DLKHMA YC GL +G+LGLK+L
Subjt:  FLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRL

Query:  AKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPS------PVTLKCSLLPFRSS
        AKLL V R+  AHFA SD+L T SVY KMK +F L  EQC+GFLYGLP+ I    +   KI++PS      P+  K S+L F SS
Subjt:  AKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPS------PVTLKCSLLPFRSS

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]3.0e-9561.51Show/hide
Query:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP------------------------------------------EFYECLRFNVDRLSILQLGLTLTDH
        NREVWSYNL  ELE++ EYL EFPIVAIDTEFP                                          EFY+CLRFNV+RL+ILQLGLTL + 
Subjt:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP------------------------------------------EFYECLRFNVDRLSILQLGLTLTDH

Query:  QGNIGMTWEFNFQDYDIISDMEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQ
         GN+ MTWEFNF+D+D ISDMEGV+SLDSFLKNKGFDF KL   GIA E+F TLFLPIC+SGRI++WITFHGFYDIAY++KLL +  +PISM  FA TAQ
Subjt:  QGNIGMTWEFNFQDYDIISDMEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQ

Query:  LLLGTIIDLKHMASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVTLKC
         LLGT+ DLKHM  YC GL +GDLGLK+LAKLL V R+GIAHFAGSDSLLTA+VY KMK MF +  EQ +GFLYGLPHRI ++ +P +KIV+PS +T   
Subjt:  LLLGTIIDLKHMASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVTLKC

Query:  SLLP
          LP
Subjt:  SLLP

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.7e-9065.92Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF
        REVWS+NL  E+ELMK YL EFPIVAIDTEFP             EFY+CL+FNV+RLSILQLGLTLTD  G IGMTWEFNFQD+D IS+MEGV SLDSF
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF

Query:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA
        LKNKGF+F KL   GIAP+EF+  F P+ +SGRI KWITFHG YDIAY+MK  N+  MP SM +FA+ A  LLGT+ DLKHMA Y   LFNG+LGLK+LA
Subjt:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA

Query:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT
        KLL ++RVG AHFAGSDSLLTASVYAKMK++  ++P+  +GFLYGLP+ I +  RP + IV+PS +T
Subjt:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT

XP_022963785.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]3.9e-8764.79Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF
        R+VWS+NL  E+EL+++ L EFPIVA+DTEFP             EFYECL+FNV+RLSILQLGLTLT+  G IGMTWEFNF+D+D IS+MEGV SLDSF
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF

Query:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA
        LKNKGF+F  L  YGIAPEEF   F PI +SGRI +WITFHG YDIAY+MKL N+  MP SM IFAITA  LLGT+ DLKHMA   + LFNG+LGLK+LA
Subjt:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA

Query:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT
        KLL V+R G AHFAGSDSLLTASVYAKMK++  ++ +  +GFLYGLP+ I    RP + IV+PS +T
Subjt:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.6e-8864.79Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF
        REVWSYNL  E+ELMK YL EFPIVA+DTEFP             EFY+CL+FNV+RLSILQLGLTL D  G IGMTWEFNF+D+D IS+MEGV SLDSF
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF

Query:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA
        LKNKGF+F KL   GIAPEEF+  F P+ +S RI +WITFHG YDIAY+MK  N+  MP SM +FAI A  LLGT+ DLKHMA Y   LFNG+LGLK+LA
Subjt:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA

Query:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT
        KLL ++R+G AHFAGSDSLLTASVYAKMK +  ++P+  +GFLYGLP+ I    RP + IV+PS +T
Subjt:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease3.4e-9262.81Show/hide
Query:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDS
        NREVWS NL  ELEL+ EYL EFP+V ID EFP             EFY CLRFNV+RL+ILQLGLTL D +GNI MTWEFNF+D+D +SDME V+SLDS
Subjt:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDS

Query:  FLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRL
        FLKNKGFDF KL  YGIA E+F TLFLPIC+SG+I +WITFHGFYDI Y++KLL +  +PISM  FA TAQ LLGT+ DLKHMA YC GL +G+LGLK+L
Subjt:  FLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRL

Query:  AKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPS------PVTLKCSLLPFRSS
        AKLL V R+  AHFA SD+L T SVY KMK +F L  EQC+GFLYGLP+ I    +   KI++PS      P+  K S+L F SS
Subjt:  AKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPS------PVTLKCSLLPFRSS

A0A6J1DLA5 Poly(A)-specific ribonuclease1.5e-9561.51Show/hide
Query:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP------------------------------------------EFYECLRFNVDRLSILQLGLTLTDH
        NREVWSYNL  ELE++ EYL EFPIVAIDTEFP                                          EFY+CLRFNV+RL+ILQLGLTL + 
Subjt:  NREVWSYNLCYELELMKEYLIEFPIVAIDTEFP------------------------------------------EFYECLRFNVDRLSILQLGLTLTDH

Query:  QGNIGMTWEFNFQDYDIISDMEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQ
         GN+ MTWEFNF+D+D ISDMEGV+SLDSFLKNKGFDF KL   GIA E+F TLFLPIC+SGRI++WITFHGFYDIAY++KLL +  +PISM  FA TAQ
Subjt:  QGNIGMTWEFNFQDYDIISDMEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQ

Query:  LLLGTIIDLKHMASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVTLKC
         LLGT+ DLKHM  YC GL +GDLGLK+LAKLL V R+GIAHFAGSDSLLTA+VY KMK MF +  EQ +GFLYGLPHRI ++ +P +KIV+PS +T   
Subjt:  LLLGTIIDLKHMASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVTLKC

Query:  SLLP
          LP
Subjt:  SLLP

A0A6J1ESM7 Poly(A)-specific ribonuclease8.3e-9165.92Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF
        REVWS+NL  E+ELMK YL EFPIVAIDTEFP             EFY+CL+FNV+RLSILQLGLTLTD  G IGMTWEFNFQD+D IS+MEGV SLDSF
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF

Query:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA
        LKNKGF+F KL   GIAP+EF+  F P+ +SGRI KWITFHG YDIAY+MK  N+  MP SM +FA+ A  LLGT+ DLKHMA Y   LFNG+LGLK+LA
Subjt:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA

Query:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT
        KLL ++RVG AHFAGSDSLLTASVYAKMK++  ++P+  +GFLYGLP+ I +  RP + IV+PS +T
Subjt:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT

A0A6J1HIZ7 Poly(A)-specific ribonuclease1.9e-8764.79Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF
        R+VWS+NL  E+EL+++ L EFPIVA+DTEFP             EFYECL+FNV+RLSILQLGLTLT+  G IGMTWEFNF+D+D IS+MEGV SLDSF
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF

Query:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA
        LKNKGF+F  L  YGIAPEEF   F PI +SGRI +WITFHG YDIAY+MKL N+  MP SM IFAITA  LLGT+ DLKHMA   + LFNG+LGLK+LA
Subjt:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA

Query:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT
        KLL V+R G AHFAGSDSLLTASVYAKMK++  ++ +  +GFLYGLP+ I    RP + IV+PS +T
Subjt:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT

A0A6J1HL76 Poly(A)-specific ribonuclease1.9e-8765.17Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF
        R+VWS+NL  E+EL+K+ L EFPIVAIDTEFP             EFYECL+FNV+RLSILQLGLTLT+  G IGMTWEFNF+D+D IS+MEGV SLDSF
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP-------------EFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSF

Query:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA
        LKNKGF+F  L  YGIAPEEF T F PI +SGRI +WITFHG YDIAY+MK  N+  MP SM IFAITA  +LGT+ DLKHMA Y   L +G+LGLK+LA
Subjt:  LKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLA

Query:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT
        KLL V+R G AHFAGSDSLLTASVYAKMK++  ++P   +GFLYGLP+ I    RP + IV+PS +T
Subjt:  KLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVT

SwissProt top hitse value%identityAlignment
Q9LEU4 Probable CCR4-associated factor 1 homolog 101.2e-3838.08Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM
        REVW YNL  E  L++E + +F  +A+DTEFP                 Y  L+ NVD L ++Q+GLT +D  GN+          W+FNF++++I  D+
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM

Query:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH
            S++  L+  G DF+K    GI    F  L +    SG +      W+TFHG YD  Y++KLL    +P+    F     +   T+ D+KH+ ++C+
Subjt:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH

Query:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMK-MMFMLQPEQCDGFLYGL
        GLF    GL RLA+L+GV RVGI H AGSDSLLT   + K+K   F    E+  G LYGL
Subjt:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMK-MMFMLQPEQCDGFLYGL

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.6e-3837.64Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP--------------EFYECLRFNVDRLSILQLGLTLTDHQGNI---------GMTWEFNFQDYDIISD
        REVW+ NL  E EL+ E + ++P +++DTEFP              + Y  L+ NVD LS++Q+GLTL+D  GN+         G  WEFNF+D+D+  D
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP--------------EFYECLRFNVDRLSILQLGLTLTDHQGNI---------GMTWEFNFQDYDIISD

Query:  MEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLP---ICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLG-TIIDLKHMASYC
             S++  L+ +G DFE+    G+  E FA L +    +C       W+TFH  YD  Y+MK+L    +P ++  F    ++L G  + D+KHM  +C
Subjt:  MEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLP---ICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLG-TIIDLKHMASYC

Query:  HGLFNGDLGLKRLAKLLGVSR-VGIAHFAGSDSLLTASVYAKMKMMFMLQ--PEQCDGFLYGL
             G  GL R+A+ L V+R VG  H AGSDSLLT   + +M+ ++ +Q  PE+  G LYGL
Subjt:  HGLFNGDLGLKRLAKLLGVSR-VGIAHFAGSDSLLTASVYAKMKMMFMLQ--PEQCDGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.3e-3736.47Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------------YECLRFNVDRLSILQLGLTLTDHQGNI-------GMTWEFNFQDY
        REVW++NL  E+ L+++ + +FP VA+DTEFP                       Y+ L+ NV+ L ++QLGLTL+D +GN+          W+FNF+++
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------------YECLRFNVDRLSILQLGLTLTDHQGNI-------GMTWEFNFQDY

Query:  DIISDMEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI--DK--WITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKH
        ++ISDM  + S++  L+    D EK +  G+  + FA L +    SG +  DK  W+TFH  YD  Y++KLL+   +P  +  F    +     + D+K+
Subjt:  DIISDMEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI--DK--WITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKH

Query:  MASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFML-QPEQCDGFLYGL
        +  +C  L+    GL+++A+LLGV RVGI+H AGSDSLLT   + KMK  F      +  GFL+GL
Subjt:  MASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFML-QPEQCDGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.9e-3938.08Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM
        REVW+ NL  E++L+++ + +FP VA+DTEFP                 YE L+ NV+ L ++QLGLT ++ QGN+          W+FNF+++D+ SD+
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM

Query:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH
          + S++  LK  G D  K ++ GI  + FA L +    SG +      W+TFH  YD  Y++KLL    +P S   F     +   T+ D+KH+  +C+
Subjt:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH

Query:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL
         L     GL +LA+LL V RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.5e-3837.16Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG--------MTWEFNFQDYDIISD
        REVW+ NL  E+ L++E + +FP VA+DTEFP                 YE L+ NV+ L ++QLGLT +D +GN+           W+FNF+++D+ SD
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG--------MTWEFNFQDYDIISD

Query:  MEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYC
        +    S++  L+  G DF K + +GI  + FA L +    SG +      W+TFH  YD  Y++KLL    +P +   F     +    + D+KH+  +C
Subjt:  MEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYC

Query:  HGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFML-QPEQCDGFLYGL
        + L     GL +LA+LL V RVGI H AGSDSLLT+  + K++  F +   E+  G LYGL
Subjt:  HGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFML-QPEQCDGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-4038.08Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM
        REVW+ NL  E++L+++ + +FP VA+DTEFP                 YE L+ NV+ L ++QLGLT ++ QGN+          W+FNF+++D+ SD+
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM

Query:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH
          + S++  LK  G D  K ++ GI  + FA L +    SG +      W+TFH  YD  Y++KLL    +P S   F     +   T+ D+KH+  +C+
Subjt:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH

Query:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL
         L     GL +LA+LL V RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-4038.08Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM
        REVW+ NL  E++L+++ + +FP VA+DTEFP                 YE L+ NV+ L ++QLGLT ++ QGN+          W+FNF+++D+ SD+
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM

Query:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH
          + S++  LK  G D  K ++ GI  + FA L +    SG +      W+TFH  YD  Y++KLL    +P S   F     +   T+ D+KH+  +C+
Subjt:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH

Query:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL
         L     GL +LA+LL V RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.3e-4038.08Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM
        REVW+ NL  E++L+++ + +FP VA+DTEFP                 YE L+ NV+ L ++QLGLT ++ QGN+          W+FNF+++D+ SD+
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM

Query:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH
          + S++  LK  G D  K ++ GI  + FA L +    SG +      W+TFH  YD  Y++KLL    +P S   F     +   T+ D+KH+  +C+
Subjt:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH

Query:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL
         L     GL +LA+LL V RVGI H AGSDSLLT+  + K+K  F + P  +  G LYGL
Subjt:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMKMMFMLQP-EQCDGFLYGL

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-3937.64Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP--------------EFYECLRFNVDRLSILQLGLTLTDHQGNI---------GMTWEFNFQDYDIISD
        REVW+ NL  E EL+ E + ++P +++DTEFP              + Y  L+ NVD LS++Q+GLTL+D  GN+         G  WEFNF+D+D+  D
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFP--------------EFYECLRFNVDRLSILQLGLTLTDHQGNI---------GMTWEFNFQDYDIISD

Query:  MEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLP---ICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLG-TIIDLKHMASYC
             S++  L+ +G DFE+    G+  E FA L +    +C       W+TFH  YD  Y+MK+L    +P ++  F    ++L G  + D+KHM  +C
Subjt:  MEGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLP---ICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLG-TIIDLKHMASYC

Query:  HGLFNGDLGLKRLAKLLGVSR-VGIAHFAGSDSLLTASVYAKMKMMFMLQ--PEQCDGFLYGL
             G  GL R+A+ L V+R VG  H AGSDSLLT   + +M+ ++ +Q  PE+  G LYGL
Subjt:  HGLFNGDLGLKRLAKLLGVSR-VGIAHFAGSDSLLTASVYAKMKMMFMLQ--PEQCDGFLYGL

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.6e-4038.08Show/hide
Query:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM
        REVW YNL  E  L++E + +F  +A+DTEFP                 Y  L+ NVD L ++Q+GLT +D  GN+          W+FNF++++I  D+
Subjt:  REVWSYNLCYELELMKEYLIEFPIVAIDTEFPEF---------------YECLRFNVDRLSILQLGLTLTDHQGNIG-------MTWEFNFQDYDIISDM

Query:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH
            S++  L+  G DF+K    GI    F  L +    SG +      W+TFHG YD  Y++KLL    +P+    F     +   T+ D+KH+ ++C+
Subjt:  EGVTSLDSFLKNKGFDFEKLSIYGIAPEEFATLFLPICQSGRI----DKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCH

Query:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMK-MMFMLQPEQCDGFLYGL
        GLF    GL RLA+L+GV RVGI H AGSDSLLT   + K+K   F    E+  G LYGL
Subjt:  GLFNGDLGLKRLAKLLGVSRVGIAHFAGSDSLLTASVYAKMK-MMFMLQPEQCDGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTAATCAATCAATGTTGATGAATTCAAATTCAAGCAATCGAGAGGTTTGGTCTTACAACCTTTGTTACGAGTTAGAACTTATGAAGGAATATTTGATAGAGTT
TCCTATAGTTGCCATAGATACTGAGTTCCCGGAGTTTTACGAGTGTCTTCGATTCAATGTCGACCGGCTGAGCATTCTTCAACTCGGTCTCACACTCACCGACCACCAAG
GAAACATTGGCATGACTTGGGAGTTCAATTTCCAAGACTACGATATAATATCTGACATGGAAGGAGTAACGTCACTTGATTCGTTTCTCAAGAATAAGGGGTTTGACTTT
GAAAAGTTAAGCATATATGGAATCGCACCCGAGGAGTTTGCAACCTTGTTTCTACCGATTTGTCAAAGTGGTCGAATCGACAAATGGATCACATTCCACGGATTTTACGA
CATTGCCTACGTAATGAAGCTTTTGAATGTCAACCCCATGCCGATCTCGATGGTGATATTCGCAATCACGGCTCAGCTATTATTGGGAACGATCATTGATCTTAAACACA
TGGCTAGTTATTGTCATGGTTTGTTTAATGGCGATTTAGGGCTAAAAAGGTTGGCGAAATTGCTCGGCGTTAGTCGAGTAGGTATTGCACATTTTGCTGGTTCGGATAGT
TTGCTCACAGCTTCAGTTTATGCCAAGATGAAAATGATGTTCATGCTTCAACCAGAGCAATGTGACGGTTTCTTATACGGATTGCCTCATCGGATTTTTCGATCTTCTCG
ACCGGCTTTGAAGATTGTCAATCCATCTCCAGTGACTCTAAAGTGTTCTTTGTTGCCTTTTAGATCATCACAGAACGATTCTTTAATGGTCTCCAAAAATACAAACTTGG
TTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTAATCAATCAATGTTGATGAATTCAAATTCAAGCAATCGAGAGGTTTGGTCTTACAACCTTTGTTACGAGTTAGAACTTATGAAGGAATATTTGATAGAGTT
TCCTATAGTTGCCATAGATACTGAGTTCCCGGAGTTTTACGAGTGTCTTCGATTCAATGTCGACCGGCTGAGCATTCTTCAACTCGGTCTCACACTCACCGACCACCAAG
GAAACATTGGCATGACTTGGGAGTTCAATTTCCAAGACTACGATATAATATCTGACATGGAAGGAGTAACGTCACTTGATTCGTTTCTCAAGAATAAGGGGTTTGACTTT
GAAAAGTTAAGCATATATGGAATCGCACCCGAGGAGTTTGCAACCTTGTTTCTACCGATTTGTCAAAGTGGTCGAATCGACAAATGGATCACATTCCACGGATTTTACGA
CATTGCCTACGTAATGAAGCTTTTGAATGTCAACCCCATGCCGATCTCGATGGTGATATTCGCAATCACGGCTCAGCTATTATTGGGAACGATCATTGATCTTAAACACA
TGGCTAGTTATTGTCATGGTTTGTTTAATGGCGATTTAGGGCTAAAAAGGTTGGCGAAATTGCTCGGCGTTAGTCGAGTAGGTATTGCACATTTTGCTGGTTCGGATAGT
TTGCTCACAGCTTCAGTTTATGCCAAGATGAAAATGATGTTCATGCTTCAACCAGAGCAATGTGACGGTTTCTTATACGGATTGCCTCATCGGATTTTTCGATCTTCTCG
ACCGGCTTTGAAGATTGTCAATCCATCTCCAGTGACTCTAAAGTGTTCTTTGTTGCCTTTTAGATCATCACAGAACGATTCTTTAATGGTCTCCAAAAATACAAACTTGG
TTGTATAG
Protein sequenceShow/hide protein sequence
MEINQSMLMNSNSSNREVWSYNLCYELELMKEYLIEFPIVAIDTEFPEFYECLRFNVDRLSILQLGLTLTDHQGNIGMTWEFNFQDYDIISDMEGVTSLDSFLKNKGFDF
EKLSIYGIAPEEFATLFLPICQSGRIDKWITFHGFYDIAYVMKLLNVNPMPISMVIFAITAQLLLGTIIDLKHMASYCHGLFNGDLGLKRLAKLLGVSRVGIAHFAGSDS
LLTASVYAKMKMMFMLQPEQCDGFLYGLPHRIFRSSRPALKIVNPSPVTLKCSLLPFRSSQNDSLMVSKNTNLVV