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Sed0023602 (gene) of Chayote v1 genome

Gene IDSed0023602
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG09:12828559..12829017
RNA-Seq ExpressionSed0023602
SyntenySed0023602
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593874.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3269.3Show/hide
Query:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLLA---AARHAPIKEREL--------PTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP
        MA+V+L HHH H  R    TLFL A VL LL    AAR  PIKE +L         TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PG+S PLEYYP
Subjt:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLLA---AARHAPIKEREL--------PTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP

Query:  EAWRCKCGNSLYMP
        EAWRCKCGNSLYMP
Subjt:  EAWRCKCGNSLYMP

XP_004145393.2 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus]4.9e-2963.16Show/hide
Query:  MALVVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKERELP------------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP
        MAL++LLHH  R     L L LL S +    AAR  PI +   P            TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQPG+S PLEYYP
Subjt:  MALVVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKERELP------------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP

Query:  EAWRCKCGNSLYMP
        EAWRCKCGN+LYMP
Subjt:  EAWRCKCGNSLYMP

XP_022930459.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata]8.1e-3266.95Show/hide
Query:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLL-------AAARHAPIKEREL--------PTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPL
        MA+V+L HHH H  R    TLFL A VL LL        AAR  PIKE +L         TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PG+S PL
Subjt:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLL-------AAARHAPIKEREL--------PTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

XP_023000566.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]4.3e-3369.91Show/hide
Query:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLLA--AARHAPIKERELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPE
        MA+V+L HHH H  R    TLFL A VL L +  AAR  PIKE +LP        TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PG+S PLEYYPE
Subjt:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLLA--AARHAPIKERELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPE

Query:  AWRCKCGNSLYMP
        AWRCKCGNSLYMP
Subjt:  AWRCKCGNSLYMP

XP_023513820.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]4.6e-3571.93Show/hide
Query:  MALVVLLHHHHRCRHHCL-TLFLLASVLFLLA---AARHAPIKERELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP
        MA+V+L HHH+  R  CL TLFL A VL LLA   AAR  PIKE +LP        TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PG+S PLEYYP
Subjt:  MALVVLLHHHHRCRHHCL-TLFLLASVLFLLA---AARHAPIKERELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP

Query:  EAWRCKCGNSLYMP
        EAWRCKCGNSLYMP
Subjt:  EAWRCKCGNSLYMP

TrEMBL top hitse value%identityAlignment
A0A0A0LKT0 Epidermal patterning factor-like protein2.4e-2963.16Show/hide
Query:  MALVVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKERELP------------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP
        MAL++LLHH  R     L L LL S +    AAR  PI +   P            TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQPG+S PLEYYP
Subjt:  MALVVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKERELP------------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYP

Query:  EAWRCKCGNSLYMP
        EAWRCKCGN+LYMP
Subjt:  EAWRCKCGNSLYMP

A0A5A7UQS2 Epidermal patterning factor-like protein6.9e-2968.18Show/hide
Query:  VVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKER---ELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWR
        V+LLHH   CR   LTLFLL  +L    AAR  PI E    +LP        TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQPG+S PLEYYPEAWR
Subjt:  VVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKER---ELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWR

Query:  CKCGNSLYMP
        CKCGN+LYMP
Subjt:  CKCGNSLYMP

A0A6J1CBX1 Epidermal patterning factor-like protein4.1e-2962.04Show/hide
Query:  VVLLHHHHRCRHHCLTLFLLASVLFLLAAA---------RHAPIKERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCK
        V++ H HHR R     L LL +  FL +A+             +   E+  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPG+S PLEYYPEAWRCK
Subjt:  VVLLHHHHRCRHHCLTLFLLASVLFLLAAA---------RHAPIKERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCK

Query:  CGNSLYMP
        CGNSL+MP
Subjt:  CGNSLYMP

A0A6J1ERG1 Epidermal patterning factor-like protein3.9e-3266.95Show/hide
Query:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLL-------AAARHAPIKEREL--------PTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPL
        MA+V+L HHH H  R    TLFL A VL LL        AAR  PIKE +L         TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PG+S PL
Subjt:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLL-------AAARHAPIKEREL--------PTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

A0A6J1KG67 Epidermal patterning factor-like protein2.1e-3369.91Show/hide
Query:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLLA--AARHAPIKERELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPE
        MA+V+L HHH H  R    TLFL A VL L +  AAR  PIKE +LP        TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PG+S PLEYYPE
Subjt:  MALVVLLHHH-HRCRHHCLTLFLLASVLFLLA--AARHAPIKERELP--------TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPE

Query:  AWRCKCGNSLYMP
        AWRCKCGNSLYMP
Subjt:  AWRCKCGNSLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 65.7e-2064.06Show/hide
Query:  KERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        + +E   RR L G GSSPP C SKCG C+PC  VHVP+ PG     EYYPEAWRCKCGN LYMP
Subjt:  KERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 45.8e-2579.31Show/hide
Query:  TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        + +R GGPGSSPPTCRSKCG C PC  VHVPIQPG+S PLEYYPEAWRCKCGN L+MP
Subjt:  TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

Q7M1E7 Polygalacturonase4.2e-0742.86Show/hide
Query:  SSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC    + + P  + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

Q9FY19 Polygalacturonase5.5e-0742.86Show/hide
Query:  SSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC    + + P  + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.5e-2372.13Show/hide
Query:  ELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        ++  ++RLGGPGS PP CR KCG C PC AVHVPIQPG+  PLEYYPEAWRCKCGN L+MP
Subjt:  ELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related4.0e-2164.06Show/hide
Query:  KERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        + +E   RR L G GSSPP C SKCG C+PC  VHVP+ PG     EYYPEAWRCKCGN LYMP
Subjt:  KERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

AT2G30370.2 allergen-related4.0e-2164.06Show/hide
Query:  KERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        + +E   RR L G GSSPP C SKCG C+PC  VHVP+ PG     EYYPEAWRCKCGN LYMP
Subjt:  KERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

AT3G22820.1 allergen-related1.7e-2472.13Show/hide
Query:  ELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        ++  ++RLGGPGS PP CR KCG C PC AVHVPIQPG+  PLEYYPEAWRCKCGN L+MP
Subjt:  ELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)4.2e-2679.31Show/hide
Query:  TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP
        + +R GGPGSSPPTCRSKCG C PC  VHVPIQPG+S PLEYYPEAWRCKCGN L+MP
Subjt:  TRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP

AT4G37810.1 unknown protein3.7e-0636Show/hide
Query:  GSSPPTC-RSKCGSCSPCTAVHVPIQPGVSF--PL----------------------EYYPEAWRCKCGNSLYMP
        GS PP C R +C SC  C A+ VP  P      PL                       Y P +W+CKCGNS+Y P
Subjt:  GSSPPTC-RSKCGSCSPCTAVHVPIQPGVSF--PL----------------------EYYPEAWRCKCGNSLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTAGTAGTCCTCCTCCACCACCACCACCGTTGTCGCCACCACTGCCTCACCCTCTTTCTTCTCGCCTCCGTTCTCTTTCTTCTCGCTGCCGCCCGCCACGCCCC
CATTAAAGAAAGGGAGTTGCCGACACGGCGGAGACTCGGTGGGCCGGGGTCGTCTCCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCTCGCCGTGCACCGCGGTGCACG
TGCCAATTCAGCCGGGAGTTAGTTTCCCGTTGGAATATTACCCCGAAGCTTGGCGTTGTAAATGCGGCAACTCGCTTTATATGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTAGTAGTCCTCCTCCACCACCACCACCGTTGTCGCCACCACTGCCTCACCCTCTTTCTTCTCGCCTCCGTTCTCTTTCTTCTCGCTGCCGCCCGCCACGCCCC
CATTAAAGAAAGGGAGTTGCCGACACGGCGGAGACTCGGTGGGCCGGGGTCGTCTCCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCTCGCCGTGCACCGCGGTGCACG
TGCCAATTCAGCCGGGAGTTAGTTTCCCGTTGGAATATTACCCCGAAGCTTGGCGTTGTAAATGCGGCAACTCGCTTTATATGCCATAA
Protein sequenceShow/hide protein sequence
MALVVLLHHHHRCRHHCLTLFLLASVLFLLAAARHAPIKERELPTRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGVSFPLEYYPEAWRCKCGNSLYMP