; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023614 (gene) of Chayote v1 genome

Gene IDSed0023614
OrganismSechium edule (Chayote v1)
DescriptionF-box protein
Genome locationLG10:2006350..2007692
RNA-Seq ExpressionSed0023614
SyntenySed0023614
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594628.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4767.05Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL
        MALGKK+  L SK  VSA D GLDF IVR+TR   RKRIVI    +  S             +AV    D   KSLLETLPQEILI +LCGVDHDDLKQL
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL

Query:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA
        I +SKTISEA LIAK WHFAYSTPSKVRAFR+A E +N SDLDE+EAPNAP T+RFRSLN+KKLA ISVALFA
Subjt:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA

TYK13104.1 F-box protein [Cucumis melo var. makuwa]1.8e-4465.34Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI
        MALGKK   L SK  VSA D+GLDF +VR+TR   RKR+VI    E         APS     V + A    +SLLE LPQEILI +LCGV+HDDLKQLI
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI

Query:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK
         VSKTISEA LIAK+ HFAYSTPSKVRAFRTAIE+++ SD DE+EAPNA  TRRFRS LN+KKLA ISVALFAEE+
Subjt:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK

XP_022926383.1 F-box protein SKIP27-like [Cucurbita moschata]2.2e-4767.05Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL
        MALGKK+  L SK  VSA D GLDF IVR+TR   RKRIVI    +  S             +AV    D   KSLLETLPQEILI +LCGVDHDDLKQL
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL

Query:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA
        I +SKTISEA LIAK WHFAYSTPSKVRAFR+A E +N SDLDE+EAPNAP T+RFRSLN+KKLA ISVALFA
Subjt:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA

XP_023003981.1 F-box protein At1g61340-like [Cucurbita maxima]8.4e-4766.09Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVI-------------RRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQ
        MALGKK+  L SK  VSA D GLDF IVR+TR   RKRIVI             +  ++ P SA       G  KSLLETLPQEILI +LCGVDHDDLKQ
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVI-------------RRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQ

Query:  LILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA
        LI +SKTI EA LIAK WHFAYSTPSKVRAFR+A   +N SDLDE+EAPNAP TRRFRSLN+KKLA ISVALFA
Subjt:  LILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA

XP_023518385.1 F-box protein SKIP27-like [Cucurbita pepo subsp. pepo]3.8e-4767.05Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL
        MALGKK+  L SK  VSA D GLDF IVR+TR   RKRIVI    +  S             +AV    D   KSLLETLPQEILI +LCGVDHDDLKQL
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL

Query:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA
        I +SKTISEA LIAK WHFAYSTPSKVRAFR+A E +N SDLDE+EAPNAP T+RFRSLN+KKLA ISVALFA
Subjt:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA

TrEMBL top hitse value%identityAlignment
A0A1S3B0I0 F-box protein At4g05010-like1.4e-4465.34Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI
        MALGKK   L SK  VSA D+GLDF +VR+TR   RKR+VI    E         APS     V + A    +SLLE LPQEILI +LCGV+HDDLKQLI
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI

Query:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK
         VSKTISEA LIAK+ HFAYSTPSKVRAFRTAIE+ + SD DE+EAPNA  TRRFRS LN+KKLA ISVALFAEE+
Subjt:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK

A0A5A7UGT0 F-box protein1.4e-4465.34Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI
        MALGKK   L SK  VSA D+GLDF +VR+TR   RKR+VI    E         APS     V + A    +SLLE LPQEILI +LCGV+HDDLKQLI
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI

Query:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK
         VSKTISEA LIAK+ HFAYSTPSKVRAFRTAIE+ + SD DE+EAPNA  TRRFRS LN+KKLA ISVALFAEE+
Subjt:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK

A0A5D3CPZ7 F-box protein8.5e-4565.34Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI
        MALGKK   L SK  VSA D+GLDF +VR+TR   RKR+VI    E         APS     V + A    +SLLE LPQEILI +LCGV+HDDLKQLI
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTE---------APSS--AAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLI

Query:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK
         VSKTISEA LIAK+ HFAYSTPSKVRAFRTAIE+++ SD DE+EAPNA  TRRFRS LN+KKLA ISVALFAEE+
Subjt:  LVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRS-LNKKKLAAISVALFAEEK

A0A6J1EHW4 F-box protein SKIP27-like1.1e-4767.05Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL
        MALGKK+  L SK  VSA D GLDF IVR+TR   RKRIVI    +  S             +AV    D   KSLLETLPQEILI +LCGVDHDDLKQL
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPS------------SAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQL

Query:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA
        I +SKTISEA LIAK WHFAYSTPSKVRAFR+A E +N SDLDE+EAPNAP T+RFRSLN+KKLA ISVALFA
Subjt:  ILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA

A0A6J1KQU3 F-box protein At1g61340-like4.1e-4766.09Show/hide
Query:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVI-------------RRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQ
        MALGKK+  L SK  VSA D GLDF IVR+TR   RKRIVI             +  ++ P SA       G  KSLLETLPQEILI +LCGVDHDDLKQ
Subjt:  MALGKKNSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVI-------------RRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQ

Query:  LILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA
        LI +SKTI EA LIAK WHFAYSTPSKVRAFR+A   +N SDLDE+EAPNAP TRRFRSLN+KKLA ISVALFA
Subjt:  LILVSKTISEAALIAKNWHFAYSTPSKVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFA

SwissProt top hitse value%identityAlignment
O65416 F-box protein SKIP271.1e-2240Show/hide
Query:  LGKKNSRLNSKIAVSATDRGLDFRIVRFTRRKRIVIRRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNW
        LG+K   ++S +  S +   ++  +V  +   +  ++R+     S     ++    KS LE LPQ++LI ++CGVDH+DLK L LVSK+I EA+L+AK  
Subjt:  LGKKNSRLNSKIAVSATDRGLDFRIVRFTRRKRIVIRRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNW

Query:  HFAYSTPSKVRAFRTAIEVENRSDL----DEVEAPNAPLTRRF-RSLNKKKLAAISVALF
        HFAY+TP K RAFR +I++E  SD     D++E PNAP   R+ ++  K++L+++S ALF
Subjt:  HFAYSTPSKVRAFRTAIEVENRSDL----DEVEAPNAPLTRRF-RSLNKKKLAAISVALF

Q5XF11 F-box protein At4g359302.0e-0640Show/hide
Query:  KSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVR
        +S LE+LP ++L+ ++C + HD LK +  VS+ I  A ++A+ +HF Y+TP + R
Subjt:  KSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVR

Q8GX77 F-box protein At1g613404.5e-1940.64Show/hide
Query:  MALGKK-----NSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPSS---AAVG---------AAADGGGKSLLETLPQEILISLLCGVDHD
        MALGKK        L  +  V     GL    V++ R   RKRI+I    E   S   + VG         + A+G  +  LE LP +IL+ ++CGV+H+
Subjt:  MALGKK-----NSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPSS---AAVG---------AAADGGGKSLLETLPQEILISLLCGVDHD

Query:  DLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAFR-------TAIEVENRSDLDEVEAPNAPLTRRFR--SLNKKK-LAAISVALF
        DLKQL  VSKTI EA +IAK  HFAYSTP K   F           +VE+  D +E+EAP APL +R+R   +N+ K  + +SVALF
Subjt:  DLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAFR-------TAIEVENRSDLDEVEAPNAPLTRRFR--SLNKKK-LAAISVALF

Q9S9T6 F-box protein At4g050101.0e-1846.26Show/hide
Query:  GLDFRIVRFTR---RKRIVIRRR---TEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAF
        GL F  VRFTR   RKRI+I +R    ++P             +SLLETL Q+ILI +LC VDH+DL  L  VSKTI +A + AK  HF YSTP K   F
Subjt:  GLDFRIVRFTR---RKRIVIRRR---TEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAF

Query:  RTAIEV-----ENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALF
        R AI +      + S  DE+E PNAP+ RRF +  +  L+ IS+ LF
Subjt:  RTAIEV-----ENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALF

Arabidopsis top hitse value%identityAlignment
AT1G61340.1 F-box family protein3.2e-2040.64Show/hide
Query:  MALGKK-----NSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPSS---AAVG---------AAADGGGKSLLETLPQEILISLLCGVDHD
        MALGKK        L  +  V     GL    V++ R   RKRI+I    E   S   + VG         + A+G  +  LE LP +IL+ ++CGV+H+
Subjt:  MALGKK-----NSRLNSKIAVSATDRGLDFRIVRFTR---RKRIVIRRRTEAPSS---AAVG---------AAADGGGKSLLETLPQEILISLLCGVDHD

Query:  DLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAFR-------TAIEVENRSDLDEVEAPNAPLTRRFR--SLNKKK-LAAISVALF
        DLKQL  VSKTI EA +IAK  HFAYSTP K   F           +VE+  D +E+EAP APL +R+R   +N+ K  + +SVALF
Subjt:  DLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAFR-------TAIEVENRSDLDEVEAPNAPLTRRFR--SLNKKK-LAAISVALF

AT1G61340.2 F-box family protein6.3e-1647.47Show/hide
Query:  ILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAFR-------TAIEVENRSDLDEVEAPNAPLTRRFR--SLNKKK-LAAISVALF
        +++ ++CGV+H+DLKQL  VSKTI EA +IAK  HFAYSTP K   F           +VE+  D +E+EAP APL +R+R   +N+ K  + +SVALF
Subjt:  ILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAFR-------TAIEVENRSDLDEVEAPNAPLTRRFR--SLNKKK-LAAISVALF

AT4G05010.1 F-box family protein7.2e-2046.26Show/hide
Query:  GLDFRIVRFTR---RKRIVIRRR---TEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAF
        GL F  VRFTR   RKRI+I +R    ++P             +SLLETL Q+ILI +LC VDH+DL  L  VSKTI +A + AK  HF YSTP K   F
Subjt:  GLDFRIVRFTR---RKRIVIRRR---TEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVRAF

Query:  RTAIEV-----ENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALF
        R AI +      + S  DE+E PNAP+ RRF +  +  L+ IS+ LF
Subjt:  RTAIEV-----ENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALF

AT4G21510.1 F-box family protein8.2e-2440Show/hide
Query:  LGKKNSRLNSKIAVSATDRGLDFRIVRFTRRKRIVIRRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNW
        LG+K   ++S +  S +   ++  +V  +   +  ++R+     S     ++    KS LE LPQ++LI ++CGVDH+DLK L LVSK+I EA+L+AK  
Subjt:  LGKKNSRLNSKIAVSATDRGLDFRIVRFTRRKRIVIRRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNW

Query:  HFAYSTPSKVRAFRTAIEVENRSDL----DEVEAPNAPLTRRF-RSLNKKKLAAISVALF
        HFAY+TP K RAFR +I++E  SD     D++E PNAP   R+ ++  K++L+++S ALF
Subjt:  HFAYSTPSKVRAFRTAIEVENRSDL----DEVEAPNAPLTRRF-RSLNKKKLAAISVALF

AT4G35930.1 F-box family protein1.4e-0740Show/hide
Query:  KSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVR
        +S LE+LP ++L+ ++C + HD LK +  VS+ I  A ++A+ +HF Y+TP + R
Subjt:  KSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPSKVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGGAAAGAAGAACAGTCGTTTGAATTCGAAAATCGCCGTTTCTGCTACCGATCGAGGATTGGATTTCAGAATCGTGAGATTTACTCGAAGGAAACGGATTGT
AATACGACGGCGGACGGAGGCGCCGTCTAGCGCCGCCGTCGGTGCAGCGGCGGACGGCGGCGGTAAGTCTCTGCTCGAAACCCTACCTCAAGAGATTCTGATTAGCTTAC
TCTGCGGTGTAGATCATGATGATCTAAAACAGCTAATTCTTGTTTCTAAGACAATTAGCGAAGCGGCTTTGATTGCGAAAAATTGGCATTTCGCTTACAGTACTCCCTCG
AAGGTTCGAGCATTTCGCACCGCCATTGAAGTCGAGAATCGCAGCGATCTGGACGAGGTCGAAGCCCCGAATGCTCCTCTCACTAGAAGATTCAGGTCATTAAACAAGAA
GAAGCTCGCAGCCATTTCCGTGGCCTTATTTGCAGAAGAAAAAGGTATCCATTGA
mRNA sequenceShow/hide mRNA sequence
GAAATATCGACCATTTTAAAGCAACTCCTAAGTTTGCTCAGTTTCCATTTTTAGAGCAAAAGCTTTTCTTCGAAATCGAAACAGAAACAGAGAGAGATTTCAGACTCGAT
TTTATTCGACAATGGCGTTGGGAAAGAAGAACAGTCGTTTGAATTCGAAAATCGCCGTTTCTGCTACCGATCGAGGATTGGATTTCAGAATCGTGAGATTTACTCGAAGG
AAACGGATTGTAATACGACGGCGGACGGAGGCGCCGTCTAGCGCCGCCGTCGGTGCAGCGGCGGACGGCGGCGGTAAGTCTCTGCTCGAAACCCTACCTCAAGAGATTCT
GATTAGCTTACTCTGCGGTGTAGATCATGATGATCTAAAACAGCTAATTCTTGTTTCTAAGACAATTAGCGAAGCGGCTTTGATTGCGAAAAATTGGCATTTCGCTTACA
GTACTCCCTCGAAGGTTCGAGCATTTCGCACCGCCATTGAAGTCGAGAATCGCAGCGATCTGGACGAGGTCGAAGCCCCGAATGCTCCTCTCACTAGAAGATTCAGGTCA
TTAAACAAGAAGAAGCTCGCAGCCATTTCCGTGGCCTTATTTGCAGAAGAAAAAGGTATCCATTGAGACAAAGATATGAATTATATAACACTGAGAACTCTGTATATTGC
TGTAGAAATATGCAAATTGACCAATTCTTCAAATCTTTGATTGAAGATGAAGATGGGTAGATTAGAAAAATAATGCAATTTATGTACAGGTAGATTACAGAGACAGATTG
ATGATAGGTAAAGGATTTAGGAAATTTGTTTATAAGGTCAGCATTTAGGTTTAGTCTCTTCTAAATTCTGATCAATTTCAACTGTACATTGTACTAAATTGGCTCTCATT
CATTTTTTTTGTCTTATAAAAACAAAACATTTTTGTTTTTCTTGCAATTTTGT
Protein sequenceShow/hide protein sequence
MALGKKNSRLNSKIAVSATDRGLDFRIVRFTRRKRIVIRRRTEAPSSAAVGAAADGGGKSLLETLPQEILISLLCGVDHDDLKQLILVSKTISEAALIAKNWHFAYSTPS
KVRAFRTAIEVENRSDLDEVEAPNAPLTRRFRSLNKKKLAAISVALFAEEKGIH