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Sed0023617 (gene) of Chayote v1 genome

Gene IDSed0023617
OrganismSechium edule (Chayote v1)
DescriptionNAD(P)H dehydrogenase subunit 5
Genome locationLG13:18579948..18580876
RNA-Seq ExpressionSed0023617
SyntenySed0023617
Gene Ontology termsGO:0009536 - plastid (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB56973.1 hypothetical protein L484_000755 [Morus notabilis]1.5e-0997.14Show/hide
Query:  PNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR
        PNLLHVKPALFRSGKSYGFMKPCAMARIRSQSY R
Subjt:  PNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR

KAB5511226.1 hypothetical protein DKX38_030151 [Salix brachista]3.1e-1268.75Show/hide
Query:  SSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRCSFSG
        S ILSLW EEK A  +    +   + SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR +  G
Subjt:  SSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRCSFSG

KAF1876802.1 hypothetical protein Lal_00043441 [Lupinus albus]4.1e-1265.08Show/hide
Query:  KGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        KGA+R+EDCNMREAR                 WTLMSIR+NHPFHGGKSLPARQEDSK +ILS
Subjt:  KGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

PPS07120.1 hypothetical protein GOBAR_AA13525 [Gossypium barbadense]4.4e-2247.4Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARREEDCNMREA----------------RSWTLMSIRMN
        M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGK      S +   +     K A++E DC MREA                RSW  M IRMN
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARREEDCNMREA----------------RSWTLMSIRMN

Query:  HPFHGGKSLPARQEDSKLQILSRCSFSGSRRGVETHKNSGMEMERDVTPVPSEM
        H FHG  +L    +  K +ILS+  F G +   +  +      +RDVTPV SEM
Subjt:  HPFHGGKSLPARQEDSKLQILSRCSFSGSRRGVETHKNSGMEMERDVTPVPSEM

RYR17226.1 hypothetical protein Ahy_B03g061995 [Arachis hypogaea]2.7e-1160Show/hide
Query:  SSILSLWI--EEKGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        S ILSL+     KGA+R+EDCN+REAR                 WTLMSIR N+PFH GKSLPARQEDSKLQILS
Subjt:  SSILSLWI--EEKGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

TrEMBL top hitse value%identityAlignment
A0A0A0L231 Uncharacterized protein5.5e-6377.91Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEEKGARREEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDSKLQ
        MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGK     SSI SLWIEEKG              WTLMSIRMNHPFHGGKSLPARQEDSKLQ
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEEKGARREEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDSKLQ

Query:  ILSR--CSFSGSRRGVETHKNSGMEMERDVTPV----PSEMPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ
        ILSR    FSGSRRGVETHKNSGMEME+             PNLLHVKPALFRSGKSYGFMKPCAMARIRSQ
Subjt:  ILSR--CSFSGSRRGVETHKNSGMEMERDVTPV----PSEMPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ

A0A2P5XUU9 Uncharacterized protein ycf682.1e-2247.4Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARREEDCNMREA----------------RSWTLMSIRMN
        M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGK      S +   +     K A++E DC MREA                RSW  M IRMN
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EEKGARREEDCNMREA----------------RSWTLMSIRMN

Query:  HPFHGGKSLPARQEDSKLQILSRCSFSGSRRGVETHKNSGMEMERDVTPVPSEM
        H FHG  +L    +  K +ILS+  F G +   +  +      +RDVTPV SEM
Subjt:  HPFHGGKSLPARQEDSKLQILSRCSFSGSRRGVETHKNSGMEMERDVTPVPSEM

A0A444ZST6 Uncharacterized protein1.3e-1160Show/hide
Query:  SSILSLWI--EEKGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        S ILSL+     KGA+R+EDCN+REAR                 WTLMSIR N+PFH GKSLPARQEDSKLQILS
Subjt:  SSILSLWI--EEKGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

A0A5N5IXQ9 Uncharacterized protein ycf681.5e-1268.75Show/hide
Query:  SSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRCSFSG
        S ILSLW EEK A  +    +   + SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR +  G
Subjt:  SSILSLWIEEKGARREEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRCSFSG

A0A6A5N1D4 Uncharacterized protein2.0e-1265.08Show/hide
Query:  KGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        KGA+R+EDCNMREAR                 WTLMSIR+NHPFHGGKSLPARQEDSK +ILS
Subjt:  KGARREEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAAC
GGAACCGGGAAAGTATACAGAAAAGACATCCTCCATTTTGTCTCTGTGGATCGAGGAGAAAGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGA
CTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGTTGTTCATTTTCGGGGTCT
CGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAGAGATGTAACTCCAGTTCCTTCGGAAATGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAG
ATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAAC
GGAACCGGGAAAGTATACAGAAAAGACATCCTCCATTTTGTCTCTGTGGATCGAGGAGAAAGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGA
CTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGTTGTTCATTTTCGGGGTCT
CGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAGAGATGTAACTCCAGTTCCTTCGGAAATGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAG
ATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
Protein sequenceShow/hide protein sequence
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEEKGARREEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRCSFSGS
RRGVETHKNSGMEMERDVTPVPSEMPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR