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Sed0023642 (gene) of Chayote v1 genome

Gene IDSed0023642
OrganismSechium edule (Chayote v1)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationLG05:29027435..29028467
RNA-Seq ExpressionSed0023642
SyntenySed0023642
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR037699 - Uncharacterized protein At5g65660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591711.1 hypothetical protein SDJN03_14057, partial [Cucurbita argyrosperma subsp. sororia]7.4e-4676.8Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF
        MEY + EAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLR +LGC DH  HR+   PP T AFSPP K  P+HTIWKENRP+SL+VLMPGDEVPRF
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF

Query:  IATACPPCAAATTAALVEVVIQKQS
        IA ACPPC A   A LVE+VIQK S
Subjt:  IATACPPCAAATTAALVEVVIQKQS

XP_008466113.1 PREDICTED: uncharacterized protein At5g65660-like [Cucumis melo]5.7e-4674.81Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPV-----TAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEV
        MEY   EAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLR  LGC DH  H + PP+      AA SPP K  P+HTIWKENRPQS+SVLMPGDEV
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPV-----TAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEV

Query:  PRFIATACPPCAAATTAALVEVVIQK--QSIPDSS
        PRFIA ACPPCA A  AALVE+V+QK  QSI DSS
Subjt:  PRFIATACPPCAAATTAALVEVVIQK--QSIPDSS

XP_022936981.1 uncharacterized protein At5g65660-like [Cucurbita moschata]7.4e-4676.8Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF
        MEY + EAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLR +LGC DH  HR+   PP T AFSPP K  P+HTIWKENRP+SL+VLMPGDEVPRF
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF

Query:  IATACPPCAAATTAALVEVVIQKQS
        IA ACPPC A   A LVE+VIQK S
Subjt:  IATACPPCAAATTAALVEVVIQKQS

XP_023536259.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]1.7e-4576.8Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF
        MEY + EAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLR +LGC DH  HR+   PP T AFSPP K  P+HTIWKENRP SL+VLMPGDEVPRF
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF

Query:  IATACPPCAAATTAALVEVVIQKQS
        IA ACPPC A   A LVE+VIQK S
Subjt:  IATACPPCAAATTAALVEVVIQKQS

XP_038899315.1 uncharacterized protein At5g65660-like [Benincasa hispida]1.4e-4778.2Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHT-IWKENRPQSLSVLMPGDEVPR
        MEY   EAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLR  LGC DH  H +   PP TAAFSPP K  P+HT IW+ENRPQSLSVLMPGDEVPR
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHT-IWKENRPQSLSVLMPGDEVPR

Query:  FIATACPPCAAATTAALVEVVIQK--QSIPDSS
        FIA ACPPCAA   AALVE+V+QK  QS PDSS
Subjt:  FIATACPPCAAATTAALVEVVIQK--QSIPDSS

TrEMBL top hitse value%identityAlignment
A0A1S3CQS4 uncharacterized protein At5g65660-like2.8e-4674.81Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPV-----TAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEV
        MEY   EAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLR  LGC DH  H + PP+      AA SPP K  P+HTIWKENRPQS+SVLMPGDEV
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPV-----TAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEV

Query:  PRFIATACPPCAAATTAALVEVVIQK--QSIPDSS
        PRFIA ACPPCA A  AALVE+V+QK  QSI DSS
Subjt:  PRFIATACPPCAAATTAALVEVVIQK--QSIPDSS

A0A5D3E545 Uncharacterized protein2.8e-4674.81Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPV-----TAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEV
        MEY   EAQDPASLSFPVGLVLLLTFLFCMCCFF CCLHWEKLR  LGC DH  H + PP+      AA SPP K  P+HTIWKENRPQS+SVLMPGDEV
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPV-----TAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEV

Query:  PRFIATACPPCAAATTAALVEVVIQK--QSIPDSS
        PRFIA ACPPCA A  AALVE+V+QK  QSI DSS
Subjt:  PRFIATACPPCAAATTAALVEVVIQK--QSIPDSS

A0A6J1CGJ4 uncharacterized protein At5g65660-like7.8e-4169.4Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIA
        M+Y + EAQDPASLSFPVGLVLLLTF FCMCCFFSCCLHW+KLR  LGC DH      PP  AA SPP K LPLHT    N+ QSL V+MPGDE PRFIA
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIA

Query:  TACPPCAAATTAA-LVEVVIQK--QSIPDSSGVL
         ACPPCAAA  AA  V+V++QK  QS PDSSG L
Subjt:  TACPPCAAATTAA-LVEVVIQK--QSIPDSSGVL

A0A6J1F906 uncharacterized protein At5g65660-like3.6e-4676.8Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF
        MEY + EAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLR +LGC DH  HR+   PP T AFSPP K  P+HTIWKENRP+SL+VLMPGDEVPRF
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNS--PPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF

Query:  IATACPPCAAATTAALVEVVIQKQS
        IA ACPPC A   A LVE+VIQK S
Subjt:  IATACPPCAAATTAALVEVVIQKQS

A0A6J1IEI5 uncharacterized protein At5g65660-like2.3e-4576Show/hide
Query:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHP--AHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF
        MEY + EAQD ASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLR +LGC DH    H + PP T AFSPP K  P+HTIWKENRP+SL+VLMPGDEVPRF
Subjt:  MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHP--AHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRF

Query:  IATACPPCAAATTAALVEVVIQKQS
        IA ACPPC A   A LVE+VIQK S
Subjt:  IATACPPCAAATTAALVEVVIQKQS

SwissProt top hitse value%identityAlignment
Q9LSK9 Uncharacterized protein At5g656605.2e-1038.05Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIATACPPCAAATTA
        SL FP+G  LLL  +F +   FSCC HW+K R L       +  N  P     S P+K  P     K+ +  S+ VLMPGD  P+FIA  CP        
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIATACPPCAAATTA

Query:  ALVEVVIQKQSIP
          V+V    QS P
Subjt:  ALVEVVIQKQSIP

Arabidopsis top hitse value%identityAlignment
AT5G65660.1 hydroxyproline-rich glycoprotein family protein3.7e-1138.05Show/hide
Query:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIATACPPCAAATTA
        SL FP+G  LLL  +F +   FSCC HW+K R L       +  N  P     S P+K  P     K+ +  S+ VLMPGD  P+FIA  CP        
Subjt:  SLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIATACPPCAAATTA

Query:  ALVEVVIQKQSIP
          V+V    QS P
Subjt:  ALVEVVIQKQSIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACGCAGAAGGCGAAGCACAGGATCCGGCCTCCCTGAGCTTCCCAGTTGGTTTGGTTCTTTTGTTGACATTTTTGTTTTGTATGTGTTGCTTTTTTTCTTGTTG
CCTTCACTGGGAAAAGCTCCGATATCTGCTCGGCTGCTCCGATCATCCCGCCCACCGCAATTCTCCGCCGGTAACCGCCGCCTTCTCGCCGCCCCACAAAACTTTGCCAC
TCCATACGATATGGAAGGAAAATCGGCCACAAAGTCTGTCAGTTTTGATGCCCGGCGACGAAGTTCCGAGGTTTATAGCAACCGCATGTCCACCGTGTGCGGCGGCGACG
ACGGCGGCGTTGGTGGAAGTTGTAATACAAAAACAGAGTATTCCGGACTCCTCTGGAGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ACGAAATGTAGAGAAGTTTGGTGAGAGAAAAGAAAAATGGAGTACGCAGAAGGCGAAGCACAGGATCCGGCCTCCCTGAGCTTCCCAGTTGGTTTGGTTCTTTTGTTGAC
ATTTTTGTTTTGTATGTGTTGCTTTTTTTCTTGTTGCCTTCACTGGGAAAAGCTCCGATATCTGCTCGGCTGCTCCGATCATCCCGCCCACCGCAATTCTCCGCCGGTAA
CCGCCGCCTTCTCGCCGCCCCACAAAACTTTGCCACTCCATACGATATGGAAGGAAAATCGGCCACAAAGTCTGTCAGTTTTGATGCCCGGCGACGAAGTTCCGAGGTTT
ATAGCAACCGCATGTCCACCGTGTGCGGCGGCGACGACGGCGGCGTTGGTGGAAGTTGTAATACAAAAACAGAGTATTCCGGACTCCTCTGGAGTTTTGTGATCTTTTCA
ATTAATCCCGTTTTTATGCGTAAATATATATATCTTTTTTTCTATTTATATTCAACTTAATTTTAATTCCATTTTTTTCTTTGGGATTTTCTAGCAATGTTCATGTTTTT
GTCTCTATTTTGTCAGTTTAATTTTATTCTCTATAGATGACAAACAACAAGATTCC
Protein sequenceShow/hide protein sequence
MEYAEGEAQDPASLSFPVGLVLLLTFLFCMCCFFSCCLHWEKLRYLLGCSDHPAHRNSPPVTAAFSPPHKTLPLHTIWKENRPQSLSVLMPGDEVPRFIATACPPCAAAT
TAALVEVVIQKQSIPDSSGVL