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Sed0023667 (gene) of Chayote v1 genome

Gene IDSed0023667
OrganismSechium edule (Chayote v1)
DescriptionLYR motif-containing protein 4
Genome locationLG01:17543801..17544067
RNA-Seq ExpressionSed0023667
SyntenySed0023667
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3950665.1 hypothetical protein CMV_023610 [Castanea mollissima]2.2e-2577.65Show/hide
Query:  PMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLNP
        P RSE+L LFRSLLRTAR FSDYNIREY KRRTIDGF+ NR+LS   SI+SA++ GKAQLE+A RQA+VYSLYAPKVKSIMDL P
Subjt:  PMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLNP

KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2781.61Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN
        MA P RSEIL+LFRSLLRTAR F DYNIREY KRRTID F+ N+SLS  SSISS YA GKAQLEVA RQALVYSLYAPKVKSIMD+N
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]2.6e-2679.31Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN
        MATP  SEILSLFRSLLRTAR F DYNIREY KRRTID F+ N++LS +SSISS YA G+AQLEVA RQA+VYSLYAPKVKSIMD+N
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]6.1e-2886.05Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL
        MATP RSEILSLFRSLLRTAR FSDYNIREY KRR ID F+ NRSLS  SSISSAYA GKAQLEVA RQALVYSLYAPKVKSIMD+
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]2.1e-2883.91Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN
        MATP RSE+LSLFRSLLRTAR F DYNIREY KRRTID F+ N+SLS +SSISSAYA GKAQLEVA RQALVYSLYAPKVKSIMD+N
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.2e-2679.31Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN
        MATP  SEILSLFRSLLRTAR F DYNIREY KRRTID F+ N++LS +SSISS YA G+AQLEVA RQA+VYSLYAPKVKSIMD+N
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN

A0A2I4FW34 LYR motif-containing protein 4-like2.4e-2578.31Show/hide
Query:  PMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL
        P RSE+LSLFRSLLRTAR FSDYNIREY KRRTIDGF+ NR+LS   SI+SA++ GKAQLEVA RQ+++YSLYAPKVKSIMDL
Subjt:  PMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL

A0A6J1C8A4 LYR motif-containing protein 43.0e-2886.05Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL
        MATP RSEILSLFRSLLRTAR FSDYNIREY KRR ID F+ NRSLS  SSISSAYA GKAQLEVA RQALVYSLYAPKVKSIMD+
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL

A0A6P6X2B6 LYR motif-containing protein 46.8e-2574.42Show/hide
Query:  ATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN
        ATP R E+LSLFRSLLRTAR FSDYNIREY KRRT+DGF+ N+ +S  SSI +A+A GK+QLEVA RQA+VYSLYAPK+KSIM+LN
Subjt:  ATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLN

A0A7N2MN47 Uncharacterized protein2.4e-2577.65Show/hide
Query:  PMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLNP
        P RSE+L LFRSLLRTAR FSDYNIREY KRRTIDGF+ NR+LS   SI+SA++ G+AQLEVA RQA+VYSLYAPKVKSIMDL P
Subjt:  PMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLNP

SwissProt top hitse value%identityAlignment
B5XD90 LYR motif-containing protein 4B2.0e-0534.18Show/hide
Query:  SEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMD
        +++LSL+R L++ +  F  YN R YA RR  D F+ANRS+     +      G+  L++  RQ  +  +Y P  K+I++
Subjt:  SEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMD

O46098 Protein bcn927.6e-0537.5Show/hide
Query:  RSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYA
        R + ++L+R+LLR +     YN R YA R+  D F+ANRS    + I    A G+  LE+  RQ ++  LY+
Subjt:  RSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYA

P82116 Protein bcn929.9e-0536.62Show/hide
Query:  RSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLY
        R + ++L+R+LLR +     YN R YA R+  D F+AN+++   + I     AGK  LE+  RQ ++  LY
Subjt:  RSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLY

Q6DCS1 LYR motif-containing protein 47.6e-0535.06Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYA
        M+   RS++LSL++ +LR ++ FS YN R YA RR  D F+  +++     I +     K  L V  RQ  +  +YA
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYA

Q9HD34 LYR motif-containing protein 41.2e-0537.66Show/hide
Query:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYA
        MA   R+++LSL+R++LR ++ FS YN R YA RR  D F+ N+++     I +     K  L V  RQ  +  LY+
Subjt:  MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein3.0e-1756.25Show/hide
Query:  SEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL
        SE+LSL R+LLR  R F DYNIREY+KRRT+DGF+ N++L+  S ++ AYA  K QL VA R   VY  Y PK K+IM++
Subjt:  SEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCGATGAGGTCTGAAATTCTGTCCCTCTTTCGTTCACTTCTTCGCACGGCGCGCCTATTTTCCGATTACAACATAAGAGAATACGCGAAACGCCGCACCAT
TGATGGCTTCAAAGCAAACCGGAGCCTTTCCGTGTCTTCATCGATCTCCTCCGCCTACGCCGCTGGAAAAGCTCAGCTCGAGGTTGCGATGCGGCAGGCCCTTGTTTACT
CCCTTTACGCGCCTAAGGTCAAGAGTATCATGGATCTCAACCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCCGATGAGGTCTGAAATTCTGTCCCTCTTTCGTTCACTTCTTCGCACGGCGCGCCTATTTTCCGATTACAACATAAGAGAATACGCGAAACGCCGCACCAT
TGATGGCTTCAAAGCAAACCGGAGCCTTTCCGTGTCTTCATCGATCTCCTCCGCCTACGCCGCTGGAAAAGCTCAGCTCGAGGTTGCGATGCGGCAGGCCCTTGTTTACT
CCCTTTACGCGCCTAAGGTCAAGAGTATCATGGATCTCAACCCCTGA
Protein sequenceShow/hide protein sequence
MATPMRSEILSLFRSLLRTARLFSDYNIREYAKRRTIDGFKANRSLSVSSSISSAYAAGKAQLEVAMRQALVYSLYAPKVKSIMDLNP