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Sed0023688 (gene) of Chayote v1 genome

Gene IDSed0023688
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:41971244..41971858
RNA-Seq ExpressionSed0023688
SyntenySed0023688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054503.1 hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa]8.1e-0550.51Show/hide
Query:  MAVSIRLAL-LSLATTILILCFFFTRTAAVASAVPDGDSNAVENA-----CHGESSDKGDQCTEQPSGADDD--EDDDFDDTYKFVDNVAVKLSASGSI
        MA+S RLAL LSL T  ++  F FTR +A  S     D + V +      C  E  DKGDQC E     D+D  EDDDFDDTYK V+N+A+ LSASGSI
Subjt:  MAVSIRLAL-LSLATTILILCFFFTRTAAVASAVPDGDSNAVENA-----CHGESSDKGDQCTEQPSGADDD--EDDDFDDTYKFVDNVAVKLSASGSI

KAE8646929.1 hypothetical protein Csa_021071 [Cucumis sativus]1.4e-0447.92Show/hide
Query:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVEN-----ACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSI
        MA+S RL L+    TIL  CF F   +A A      D + V++      C  E  DKGDQC E+    D  EDDDFDDTYK V+N+AV LSASG I
Subjt:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVEN-----ACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSI

KAG6570557.1 hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0852.63Show/hide
Query:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVENA-----CHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGS
        MAVS RLALLSL T  ++LC  FTR AA+A +    D + V ++     C+ E   KGDQC E+  G    ED+DFDDTYK V+NVA++LSASGS
Subjt:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVENA-----CHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGS

KAG6604744.1 hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]8.1e-0548.91Show/hide
Query:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVE-NACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSI
        MAVS RLAL SL T  ++LCF  TR AAVA +    + + V  ++   + S+K  QC ++    +DD DDDFDDTYK V+N+A+ LSASG I
Subjt:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVE-NACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSI

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ4 Uncharacterized protein6.7e-0547.92Show/hide
Query:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVEN-----ACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSI
        MA+S RL L+    TIL  CF F   +A A      D + V++      C  E  DKGDQC E+    D  EDDDFDDTYK V+N+AV LSASG I
Subjt:  MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVEN-----ACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSI

A0A5D3CVV2 Uncharacterized protein3.9e-0550.51Show/hide
Query:  MAVSIRLAL-LSLATTILILCFFFTRTAAVASAVPDGDSNAVENA-----CHGESSDKGDQCTEQPSGADDD--EDDDFDDTYKFVDNVAVKLSASGSI
        MA+S RLAL LSL T  ++  F FTR +A  S     D + V +      C  E  DKGDQC E     D+D  EDDDFDDTYK V+N+A+ LSASGSI
Subjt:  MAVSIRLAL-LSLATTILILCFFFTRTAAVASAVPDGDSNAVENA-----CHGESSDKGDQCTEQPSGADDD--EDDDFDDTYKFVDNVAVKLSASGSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTTTCAATACGACTCGCCCTTCTCTCCCTCGCCACGACAATCCTAATCCTCTGCTTCTTCTTCACCAGAACCGCCGCCGTCGCCTCCGCCGTCCCCGACGGCGA
CTCCAACGCCGTCGAAAACGCCTGCCACGGCGAGAGCTCCGACAAAGGCGACCAGTGCACGGAACAACCCTCCGGCGCTGACGACGACGAAGACGACGATTTCGATGACA
CCTACAAGTTCGTCGACAACGTCGCCGTGAAGCTGTCGGCGTCCGGCAGCATTTACCATTGGGTGGAGAAAGCGTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAACGCAAAAAAAAAAAAAAAAATCCATTTCTCAGCGGTATATATATTTTGGTGGCCACAAGAACTCTTCAATTCCACTCCCGAAAAATCAAACTCCCTCACAAACC
CTAATCATGGCCGTTTCAATACGACTCGCCCTTCTCTCCCTCGCCACGACAATCCTAATCCTCTGCTTCTTCTTCACCAGAACCGCCGCCGTCGCCTCCGCCGTCCCCGA
CGGCGACTCCAACGCCGTCGAAAACGCCTGCCACGGCGAGAGCTCCGACAAAGGCGACCAGTGCACGGAACAACCCTCCGGCGCTGACGACGACGAAGACGACGATTTCG
ATGACACCTACAAGTTCGTCGACAACGTCGCCGTGAAGCTGTCGGCGTCCGGCAGCATTTACCATTGGGTGGAGAAAGCGTGAGATTAACCGTCGTCGGAGGAAGAGCAC
GGCGGCGAAACCTGCCATGTTTTCTTTCTCCTTCTTCTTCGTTTGGTTAATTACTTTTATGCCCTTTTAGTTATTTCTTTCTATTTTAATTCCCTCATTTATTATCGTCT
TTGGTTTTTTTTTTTTTTTTGCTTGCGGCATAAGACAATTGGTTGCTGGTGGATCTCATTGGTGT
Protein sequenceShow/hide protein sequence
MAVSIRLALLSLATTILILCFFFTRTAAVASAVPDGDSNAVENACHGESSDKGDQCTEQPSGADDDEDDDFDDTYKFVDNVAVKLSASGSIYHWVEKA