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Sed0023703 (gene) of Chayote v1 genome

Gene IDSed0023703
OrganismSechium edule (Chayote v1)
DescriptionComplex I-B22
Genome locationLG01:1995675..2000232
RNA-Seq ExpressionSed0023703
SyntenySed0023703
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]4.5e-5589.66Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS +STA YL RR+AQ+ERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGN
        PP G+EIIYDYGRE +
Subjt:  PPPGIEIIYDYGREGN

XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]1.2e-5592.98Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANKHVEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PP GIEIIYDYGRE
Subjt:  PPPGIEIIYDYGRE

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]9.2e-5691.23Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+ANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PPPGIEIIY+YGRE
Subjt:  PPPGIEIIYDYGRE

XP_023532128.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]4.1e-5692.98Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS +STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANK+VED+DTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PPPGIEIIYDYGRE
Subjt:  PPPGIEIIYDYGRE

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]2.7e-5592.11Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEA+KHVEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PP GIEIIY YGRE
Subjt:  PPPGIEIIYDYGRE

TrEMBL top hitse value%identityAlignment
A0A1S3CDS7 Complex I-B226.4e-5591.23Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEAN+HVEDLDTIDKLI +GEASY+KWRHPDPYIVPWAPGGSKFTRNP 
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PP GIEIIYDYGRE
Subjt:  PPPGIEIIYDYGRE

A0A6J1CYA5 Complex I-B225.8e-5692.98Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERFEANKHVEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PP GIEIIYDYGRE
Subjt:  PPPGIEIIYDYGRE

A0A6J1FYY7 Complex I-B224.4e-5691.23Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+ANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PPPGIEIIY+YGRE
Subjt:  PPPGIEIIYDYGRE

A0A6J1J845 Complex I-B224.4e-5691.23Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF+STA YL RR+AQKERVRILYRRALKDTLNWAVHRHLFY+DASDLRERF+ANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PPPGIEIIY+YGRE
Subjt:  PPPGIEIIYDYGRE

A0A6J1L2P5 Complex I-B222.9e-5590.35Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS +STA YL RR+AQ+ERVRILYRRALK+TLNWAVHRHLFY+DASDLRERFEANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PPPG+EIIY+YGRE
Subjt:  PPPGIEIIYDYGRE

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.6e-1035.05Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F S+ AYL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.0e-0935.05Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F ++ AYL  R    ++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.1e-0832.99Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F ++  YL      +++V  LY+RAL+   +W V R  +   A  +R RFE +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.4e-5181.03Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STAAY  RR+AQKERVRILYRRALKDTLNWAVHRH+FY+DASDLRE+F  N+ VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGN
        PP GIEI+Y+YG E N
Subjt:  PPPGIEIIYDYGREGN

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.5e-1035.05Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F +  AYL      +++V  LY+RAL+   +W +HR  +   A  +R RFE +K+ +D+    +L+ + E  + + +HP PYI P +PGG+ F R
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein1.0e-5281.03Show/hide
Query:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STAAY  RR+AQKERVRILYRRALKDTLNWAVHRH+FY+DASDLRE+F  N+ VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGN
        PP GIEI+Y+YG E N
Subjt:  PPPGIEIIYDYGREGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTACGTCGACGGCGGCGTATTTGGGGCGGCGATCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAACTGGGCCGTTCA
TCGCCATCTCTTCTACAAAGATGCTTCTGATCTTCGGGAGAGATTCGAGGCTAACAAGCATGTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGAGACACCCTGATCCATATATTGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTCCTGGGATCGAGATAATATATGAC
TATGGGCGGGAAGGTAACTGA
mRNA sequenceShow/hide mRNA sequence
AAACGGTGCGTTTGGATAATGGTTAAACGGCGTCGTGTTAGGTGTTAATCAGTCCCAATGAAAGCCCCAATCAAAGAAGAACACAAAAACAGTGAATACAGAGTCAGCGA
TTGAGAGGAGGAGAACGATGAGCTTTACGTCGACGGCGGCGTATTTGGGGCGGCGATCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACT
CTCAACTGGGCCGTTCATCGCCATCTCTTCTACAAAGATGCTTCTGATCTTCGGGAGAGATTCGAGGCTAACAAGCATGTGGAAGATCTTGACACAATAGACAAGCTGAT
AGCTGATGGGGAAGCTTCCTATAATAAGTGGAGACACCCTGATCCATATATTGTTCCTTGGGCTCCCGGTGGTTCTAAGTTTACGCGAAACCCAACTCCACCTCCTGGGA
TCGAGATAATATATGACTATGGGCGGGAAGGTAACTGAAATCTTCATTTTCATGGTAATAAATAAAGGTTTAAATGATTCGTTGCTTCGTCTTAGTTGATGATGATAAAG
GGAGAGCTTTTGATGTGTAAAAACTTTGAATGAACACAAATTATAGTAATCCTTGTTGTTGATTTCTACTTTTGCTTAGAAAAATCACCATTGGAACGGTGCATTATGAT
GTTGCAACTTTTGATTAATTTAAGAGTTCATCCTTTGAATGTCCA
Protein sequenceShow/hide protein sequence
MSFTSTAAYLGRRSAQKERVRILYRRALKDTLNWAVHRHLFYKDASDLRERFEANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYD
YGREGN