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Sed0023730 (gene) of Chayote v1 genome

Gene IDSed0023730
OrganismSechium edule (Chayote v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationLG05:33884561..33889013
RNA-Seq ExpressionSed0023730
SyntenySed0023730
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148697.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus]1.2e-3284.21Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAARSIFRSSS +AATLLSAGA+AAPA SPFR ASKRPFS C+ R+P E+SFCVESMLPFHSATSSALMTSMLSVS HS+GWLSEV+GL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

XP_008459321.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucumis melo]4.0e-3386.32Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAAR+IFRSSSG+ ATLLSAGA+AAPARSPFR ASKRPFS  + RIP EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSEV+GL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

XP_022969309.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]3.6e-3487.37Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAAR+I RSS GRAATLLS G++AAPARS FR ASKRPFSQCA+R+P EMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

XP_023554650.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]2.1e-3487.37Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAAR+I RSS G+AATLLS GA+AAPARSPFR ASKRP SQCA+R+P EMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]4.3e-3587.37Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFA R+IFRSSSG+AATLLS GA+AAPARSPFR ASKRPFSQC++RIP EMSFCVESMLPFHSATSSALM SMLSVSRH+YGWLSEVTGL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

TrEMBL top hitse value%identityAlignment
A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.9e-3386.32Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAAR+IFRSSSG+ ATLLSAGA+AAPARSPFR ASKRPFS  + RIP EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSEV+GL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 65.3e-3185.87Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL
        MASFAAR+IFRSSSG+AATLLSAGA+AAPARSPFR ASKRPFS  + RIP EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE   L
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL

A0A6J1GM36 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X17.4e-3384.21Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAAR+I RSS G+AATLLS G++AAPARS FR A+KRPFSQCA+R+P EMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

A0A6J1HZK6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.4e-3187.64Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAAR+I RSS GRAATLLS G++AAPARS FR ASKRPFSQCA+R+P EMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.8e-3487.37Show/hide
Query:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS
        MASFAAR+I RSS GRAATLLS G++AAPARS FR ASKRPFSQCA+R+P EMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGL+TS
Subjt:  MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.2e-1151.16Show/hide
Query:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        ARS+ R++S R+A   S G  A+ A+S    FR  ++R      +R P E+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.1e-1250Show/hide
Query:  AARSIFRSSSGRAATL---LSAGAKAAP--ARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLE
        AARS+FRS++ RA++     SAG K  P  AR+ FR   + P +    R P E+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+  V GL+
Subjt:  AARSIFRSSSGRAATL---LSAGAKAAP--ARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLE

AT1G28395.2 unknown protein1.1e-1250Show/hide
Query:  AARSIFRSSSGRAATL---LSAGAKAAP--ARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLE
        AARS+FRS++ RA++     SAG K  P  AR+ FR   + P +    R P E+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+  V GL+
Subjt:  AARSIFRSSSGRAATL---LSAGAKAAP--ARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLE

AT2G20585.1 nuclear fusion defective 68.4e-1351.16Show/hide
Query:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        ARS+ R++S R+A   S G  A+ A+S    FR  ++R      +R P E+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.2 nuclear fusion defective 68.4e-1351.16Show/hide
Query:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        ARS+ R++S R+A   S G  A+ A+S    FR  ++R      +R P E+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.3 nuclear fusion defective 68.4e-1351.16Show/hide
Query:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        ARS+ R++S R+A   S G  A+ A+S    FR  ++R      +R P E+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARSIFRSSSGRAATLLSAGAKAAPARSP---FRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGCCGCCAGGTCCATTTTCCGATCATCTTCCGGCAGGGCTGCAACTCTTCTGAGCGCCGGAGCCAAAGCAGCTCCGGCTCGTTCACCATTTCGCAATGC
TTCTAAACGACCTTTCTCTCAGTGTGCCATAAGGATTCCAGCTGAAATGAGCTTCTGTGTGGAGTCTATGCTTCCGTTTCATTCTGCTACTTCCTCAGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGCTGGCTTTCAGAAGTGACTGGTTTGGAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
GAAGGAAATAAAAACAGAAAAGAAAAGAAAAGAAAACCACCAATTTTGTCGAGCTGCGGCGGCTGGGTTTAGCATTTGAATGCCCTAAATCTGGAAACTGAACTCTGTTC
ATTGTGGCTGGTTCTATACAATTTGTTGTCAAATTCTCCGATTTTCCTATGGCTTCCTTCGCCGCCAGGTCCATTTTCCGATCATCTTCCGGCAGGGCTGCAACTCTTCT
GAGCGCCGGAGCCAAAGCAGCTCCGGCTCGTTCACCATTTCGCAATGCTTCTAAACGACCTTTCTCTCAGTGTGCCATAAGGATTCCAGCTGAAATGAGCTTCTGTGTGG
AGTCTATGCTTCCGTTTCATTCTGCTACTTCCTCAGCATTGATGACTTCGATGCTTTCTGTCTCTCGCCATAGTTATGGCTGGCTTTCAGAAGTGACTGGTTTGGAAACT
TCATGATGTTGGTTGGATATTCTTCAATCTCCTGGACAACACACATTCACCCAAGTAATTTCATTTCAACAAGGAGTTAAAAGCTTCACCTGGCAGCCCCCTTCATTTCT
AGTTAATTTTTTATTTTTGGGGTTGATATTTGTAGTCCGGGAACTTTAGTTTATTTAAACTTCGTGACAATTTAGTCCATTTTGAGAAAAATATTATTAAGATTTCATGG
AATTTGTTACATATGCTGATCCATAAAATGAAAAAGGCTATATTATCTTGTATTTATAAACTACAAAGAC
Protein sequenceShow/hide protein sequence
MASFAARSIFRSSSGRAATLLSAGAKAAPARSPFRNASKRPFSQCAIRIPAEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVTGLETS