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Sed0023763 (gene) of Chayote v1 genome

Gene IDSed0023763
OrganismSechium edule (Chayote v1)
DescriptionAnkyrin repeat-containing protein
Genome locationLG01:10868756..10869460
RNA-Seq ExpressionSed0023763
SyntenySed0023763
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652661.1 hypothetical protein Csa_014004 [Cucumis sativus]3.1e-1470Show/hide
Query:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV
        E TMR+  +  K  +E FT EHR LVKEAE WVKSTANSCMLVA LIATV F AAFTVPGG NDN G+P+
Subjt:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV

KAG6584105.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1470.42Show/hide
Query:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-NTGYPV
        +E TMR+  K  + TRE F  EH+ LVKEAE WVKSTANSCMLVA LIATV FAAAFTVPGGND N G P+
Subjt:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-NTGYPV

XP_011648419.1 ankyrin repeat-containing protein At5g02620 isoform X2 [Cucumis sativus]3.1e-1470Show/hide
Query:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV
        E TMR+  +  K  +E FT EHR LVKEAE WVKSTANSCMLVA LIATV F AAFTVPGG NDN G+P+
Subjt:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV

XP_023520201.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita pepo subsp. pepo]2.4e-1470.42Show/hide
Query:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-NTGYPV
        +E TMR+  K  + TRE F  EH+ LVKEAE WVKSTANSCMLVA LIATV FAAAFTVPGGND N G P+
Subjt:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-NTGYPV

XP_031739107.1 ankyrin repeat-containing protein At5g02620 isoform X1 [Cucumis sativus]3.1e-1470Show/hide
Query:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV
        E TMR+  +  K  +E FT EHR LVKEAE WVKSTANSCMLVA LIATV F AAFTVPGG NDN G+P+
Subjt:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV

TrEMBL top hitse value%identityAlignment
A0A1S3B1Q1 ankyrin repeat-containing protein At5g02620-like5.7e-1470Show/hide
Query:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV
        E TMR+  K  +  +E FT EHR LVKEAE WVKSTANSCMLVA LIATV F AAFTVPGG NDN G P+
Subjt:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV

A0A5A7UP27 Ankyrin repeat-containing protein5.7e-1470Show/hide
Query:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV
        E TMR+  K  +  +E FT EHR LVKEAE WVKSTANSCMLVA LIATV F AAFTVPGG NDN G P+
Subjt:  ELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGG-NDNTGYPV

A0A6J1C944 ankyrin repeat-containing protein ITN1-like1.1e-1276.92Show/hide
Query:  RETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTG
        RE FT EH+ L+K  E W+K+TANSCMLVA LIATV FAAAFTVPGGNDNTG
Subjt:  RETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTG

A0A6J1GRW2 ankyrin repeat-containing protein ITN1-like1.1e-1262.67Show/hide
Query:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-----NTGYPV
        +ELTMR   K  +  RE FT EHR LV+E E W+K TANSCMLVA LIATV FAA FTVPGGN+     NTG P+
Subjt:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-----NTGYPV

A0A6J1JVK1 ankyrin repeat-containing protein ITN1-like1.1e-1262.67Show/hide
Query:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-----NTGYPV
        +ELTMR   K  +  RE FT EHR LV+E E W+K TANSCMLVA LIATV FAA FTVPGGN+     NTG P+
Subjt:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGND-----NTGYPV

SwissProt top hitse value%identityAlignment
Q9C7A2 Ankyrin repeat-containing protein ITN16.8e-0442.86Show/hide
Query:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTGYPV
        +E T R N   H  ++E      R L +E    + +  NS  +VA L ATVAFAA FTVPGG++N G  V
Subjt:  MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTGYPV

Arabidopsis top hitse value%identityAlignment
AT3G18670.1 Ankyrin repeat family protein7.6e-1147.69Show/hide
Query:  LNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTGYPVH
        +N K  K  +  FT +H+ LV++ E W+K TA SC +VAALI T+ F++AFTVPGG  + G P++
Subjt:  LNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTGYPVH

AT3G54070.1 Ankyrin repeat family protein4.5e-1160.78Show/hide
Query:  ETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTG
        + FT +H  L KE E W+K TA +CML A LIATV FAAA T+PGGND++G
Subjt:  ETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTG

AT5G04690.1 Ankyrin repeat family protein7.6e-1161.4Show/hide
Query:  ETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNT--GYPVH
        E F  EH A+  EAE W+K TA SC LVAALI TV FAA FTVPGG D+   G P H
Subjt:  ETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNT--GYPVH

AT5G04700.1 Ankyrin repeat family protein6.9e-1263.16Show/hide
Query:  ETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNT--GYPVH
        E FT EH+ L +EAE W+K TA SC LVAALI TV FAA FTVPGG D+   G P H
Subjt:  ETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNT--GYPVH

AT5G35810.1 Ankyrin repeat family protein6.9e-1252.38Show/hide
Query:  MRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTG
        ++  +K  +   + FT EH  L KE E W+K TA +C+LV+ LIATV FAAAFT+PGGND +G
Subjt:  MRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTACGATGAGATTAAATTCGAAAGCCCATAAGGAAACACGTGAAACATTCACCCTTGAGCATAGAGCGCTGGTGAAAGAAGCAGAAACATGGGTGAAGAGTAC
GGCAAATTCGTGCATGCTGGTTGCAGCTTTGATAGCCACTGTAGCTTTTGCTGCTGCCTTCACCGTACCAGGCGGAAACGACAACACAGGCTATCCCGTACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTACGATGAGATTAAATTCGAAAGCCCATAAGGAAACACGTGAAACATTCACCCTTGAGCATAGAGCGCTGGTGAAAGAAGCAGAAACATGGGTGAAGAGTAC
GGCAAATTCGTGCATGCTGGTTGCAGCTTTGATAGCCACTGTAGCTTTTGCTGCTGCCTTCACCGTACCAGGCGGAAACGACAACACAGGCTATCCCGTACATTAG
Protein sequenceShow/hide protein sequence
MELTMRLNSKAHKETRETFTLEHRALVKEAETWVKSTANSCMLVAALIATVAFAAAFTVPGGNDNTGYPVH