CuGenDBv2

Gene ID	Sed0023788
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal S3-like protein
Genome location	LG09:40016801..40019757
RNA-Seq Expression	Sed0023788
Synteny	Sed0023788
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022149321.1 40S ribosomal protein S3-3 [Momordica charantia]

1.6e-123

99.15

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIHTPKEEEEF+RPVAVIPTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

XP_022953609.1 40S ribosomal protein S3-3-like [Cucurbita moschata]

1.0e-122

98.71

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEV
        PTPLPDLVTIHTPKEEE+F+RPVAVIPTA+IEV
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEV

XP_022964488.1 40S ribosomal protein S3-3 [Cucurbita moschata]

1.8e-122

98.29

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIHTPKEEEEF+RP AV PTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

XP_023000220.1 40S ribosomal protein S3-3 isoform X1 [Cucurbita maxima]

7.9e-123

98.72

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIH PKEEEEF+RPVAVIPTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

XP_023514160.1 40S ribosomal protein S3-3 [Cucurbita pepo subsp. pepo]

4.7e-123

98.72

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIHTPKEEEEF+RP AVIPTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D813 40S ribosomal protein S3-3

7.7e-124

99.15

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIHTPKEEEEF+RPVAVIPTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

A0A6J1GQ60 40S ribosomal protein S3-3-like

5.0e-123

98.71

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEV
        PTPLPDLVTIHTPKEEE+F+RPVAVIPTA+IEV
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEV

A0A6J1HKZ2 40S ribosomal protein S3-3

8.6e-123

98.29

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIHTPKEEEEF+RP AV PTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

A0A6J1JPM9 40S ribosomal protein S3-3-like

3.3e-122

98.28

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP NSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEV
        PTPLPDLVTIHTPKEEE+F+RPVAVIPTA+IEV
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEV

A0A6J1KD29 40S ribosomal protein S3-3 isoform X1

3.8e-123

98.72

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA
        PTPLPDLVTIH PKEEEEF+RPVAVIPTA+IEVA
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADIEVA

SwissProt top hits

e value

%identity

Alignment

P02350 40S ribosomal protein S3-A

1.3e-96

80.52

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADI
          PLPD V+I  PK+E        ++PT  I
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADI

P47835 40S ribosomal protein S3-B

1.3e-96

80.52

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADI
          PLPD V+I  PK+E        ++PT  I
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTADI

Q9FJA6 40S ribosomal protein S3-3

5.0e-112

89.08

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA
         TPLPD+V IHTPKE++ ++ P  V+  A
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA

Q9M339 40S ribosomal protein S3-2

3.6e-110

89.08

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA
         TPLPD+V IH+PKEEE    P  V   A
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA

Q9SIP7 40S ribosomal protein S3-1

1.2e-108

86.38

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPV-AVIPTADIEVA
         TPLPD+V IH PK++  +  P  A  P   ++ A
Subjt:  PTPLPDLVTIHTPKEEEEFVRPV-AVIPTADIEVA

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

8.2e-110

86.38

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPV-AVIPTADIEVA
         TPLPD+V IH PK++  +  P  A  P   ++ A
Subjt:  PTPLPDLVTIHTPKEEEEFVRPV-AVIPTADIEVA

AT3G53870.1 Ribosomal protein S3 family protein

2.6e-111

89.08

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA
         TPLPD+V IH+PKEEE    P  V   A
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA

AT5G35530.1 Ribosomal protein S3 family protein

3.6e-113

89.08

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Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP KEYID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA
         TPLPD+V IHTPKE++ ++ P  V+  A
Subjt:  PTPLPDLVTIHTPKEEEEFVRPVAVIPTA

Sequences

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CDS sequence

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ATGGCAACTCAGATGAGCAAGAAACGAAAGTTTGTGGCGGATGGAGTGTTCTTCGCCGAACTTAACGAAGTTCTTACCAGAGAACTCGCCGAGGATGGATACTCCGGCGT
CGAAGTTAGGGTTACGCCTATGCGCACTGAGATTATCATTAGGGCTACTCGTACTCAGAATGTTCTTGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTC
AGAAGCGTTTCAAGTTCCCTGAAAACAGTGTTGAGCTATATGCCGAAAAGGTCAACAACAGAGGACTTTGCGCCATTGCTCAAGCCGAGTCTCTTCGCTACAAGCTTCTT
GGAGGCCTTGCTGTGAGGAGGGCTTGCTATGGTGTCCTTAGATTTGTCATGGAGAGTGGTGCTAAGGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAACGTGC
CAAGTCCATGAAATTCAAGGATGGATACATGATCTCATCTGGACAGCCAGTGAAAGAGTACATCGACTCCGCCGTGAGACACGTCCTCCTTAGACAGGGTGTTCTTGGTA
TCAAGGTCAAGATCATGCTTGATTGGGACCCGAAGGGCAAGCAAGGTCCCCCGACGCCTCTTCCCGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAGTTCGTT
AGGCCCGTGGCTGTGATTCCGACAGCCGACATCGAGGTTGCAGAAGTTTAA

mRNA sequence

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ATCAAAAGCGATTTCTAGGGTTTTGTTAATCTCCAACGGCGATTGAAGCAGCACCAGCAACCAATCATGGCAACTCAGATGAGCAAGAAACGAAAGTTTGTGGCGGATGG
AGTGTTCTTCGCCGAACTTAACGAAGTTCTTACCAGAGAACTCGCCGAGGATGGATACTCCGGCGTCGAAGTTAGGGTTACGCCTATGCGCACTGAGATTATCATTAGGG
CTACTCGTACTCAGAATGTTCTTGGTGAGAAAGGAAGGAGAATTAGAGAATTGACATCTGTTGTTCAGAAGCGTTTCAAGTTCCCTGAAAACAGTGTTGAGCTATATGCC
GAAAAGGTCAACAACAGAGGACTTTGCGCCATTGCTCAAGCCGAGTCTCTTCGCTACAAGCTTCTTGGAGGCCTTGCTGTGAGGAGGGCTTGCTATGGTGTCCTTAGATT
TGTCATGGAGAGTGGTGCTAAGGGATGTGAGGTTATTGTTAGTGGTAAGCTGAGGGCTCAACGTGCCAAGTCCATGAAATTCAAGGATGGATACATGATCTCATCTGGAC
AGCCAGTGAAAGAGTACATCGACTCCGCCGTGAGACACGTCCTCCTTAGACAGGGTGTTCTTGGTATCAAGGTCAAGATCATGCTTGATTGGGACCCGAAGGGCAAGCAA
GGTCCCCCGACGCCTCTTCCCGATTTGGTTACTATCCATACTCCCAAGGAGGAAGAGGAGTTCGTTAGGCCCGTGGCTGTGATTCCGACAGCCGACATCGAGGTTGCAGA
AGTTTAAGATAGAAGTGCAGAATGAGGGAGCAACGAGTCGTAGTAGTTTAGTGTTTCTATTACATAATCGTTTCTTTCTTTCAGGATATGAAATTCGAAGTTTTGATGTT
TTTCTTCGGTTGAGTTATGATTTTGGCATGTTTATGTTACACATTTTCACACCAACCTTGGTAGTTTGTTTATGTCAGAGCCCCTACTGTTTAATTGTAAGCCATCTCTA
TGGTTTTACCATAATCTGTTCAGTCTAGGATTATCAACCTAAAGATTAAAATGTTTGGCATTTTTTCGTCATGTGTTTGTCTAATTTACTGAAACGAAAATTTAAAATAT
TGACTCTTGGTTGATTTTA

Protein sequence

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MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL
GGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHTPKEEEEFV
RPVAVIPTADIEVAEV

Sed0023788 (gene) of Chayote v1 genome