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Sed0023799 (gene) of Chayote v1 genome

Gene IDSed0023799
OrganismSechium edule (Chayote v1)
DescriptionNAD(P)H dehydrogenase subunit 5
Genome locationContig00297:55853..56782
RNA-Seq ExpressionSed0023799
SyntenySed0023799
Gene Ontology termsGO:0009536 - plastid (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB56973.1 hypothetical protein L484_000755 [Morus notabilis]1.5e-0997.14Show/hide
Query:  PNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR
        PNLLHVKPALFRSGKSYGFMKPCAMARIRSQSY R
Subjt:  PNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR

KAB5511226.1 hypothetical protein DKX38_030151 [Salix brachista]2.1e-1171.19Show/hide
Query:  SSILSLWIEERGARQEEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR
        S ILSLW EE+ A  +    +   + SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR
Subjt:  SSILSLWIEERGARQEEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR

KAF1876802.1 hypothetical protein Lal_00043441 [Lupinus albus]2.7e-1161.9Show/hide
Query:  RGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        +GA+++EDCNMREAR                 WTLMSIR+NHPFHGGKSLPARQEDSK +ILS
Subjt:  RGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

PPS07120.1 hypothetical protein GOBAR_AA13525 [Gossypium barbadense]4.4e-2246.79Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EERGARQEEDCNMREA----------------RSWTLMSIRMN
        M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGK      S +   +     + A+QE DC MREA                RSW  M IRMN
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EERGARQEEDCNMREA----------------RSWTLMSIRMN

Query:  HPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMERDVTPVPSEM
        H FHG  +L    +  K +ILS+    F G +   +  +      +RDVTPV SEM
Subjt:  HPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMERDVTPVPSEM

RYR17226.1 hypothetical protein Ahy_B03g061995 [Arachis hypogaea]1.7e-1057.33Show/hide
Query:  SSILSLWI--EERGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        S ILSL+     +GA+++EDCN+REAR                 WTLMSIR N+PFH GKSLPARQEDSKLQILS
Subjt:  SSILSLWI--EERGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

TrEMBL top hitse value%identityAlignment
A0A0A0L231 Uncharacterized protein6.3e-6779.65Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEERGARQEEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDSKLQ
        MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGK     SSI SLWIEE+G              WTLMSIRMNHPFHGGKSLPARQEDSKLQ
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEERGARQEEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDSKLQ

Query:  ILSRKVVHFSGSRRGVETHKNSGMEMERDVTPV----PSEMPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ
        ILSRKVVHFSGSRRGVETHKNSGMEME+             PNLLHVKPALFRSGKSYGFMKPCAMARIRSQ
Subjt:  ILSRKVVHFSGSRRGVETHKNSGMEMERDVTPV----PSEMPNLLHVKPALFRSGKSYGFMKPCAMARIRSQ

A0A2P5XUU9 Uncharacterized protein ycf682.1e-2246.79Show/hide
Query:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EERGARQEEDCNMREA----------------RSWTLMSIRMN
        M LCTLRIGIHFLKD GFRALGYLYDPI CVK A+ TEPGK      S +   +     + A+QE DC MREA                RSW  M IRMN
Subjt:  MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWI---EERGARQEEDCNMREA----------------RSWTLMSIRMN

Query:  HPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMERDVTPVPSEM
        H FHG  +L    +  K +ILS+    F G +   +  +      +RDVTPV SEM
Subjt:  HPFHGGKSLPARQEDSKLQILSRKVVHFSGSRRGVETHKNSGMEMERDVTPVPSEM

A0A444ZST6 Uncharacterized protein8.4e-1157.33Show/hide
Query:  SSILSLWI--EERGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        S ILSL+     +GA+++EDCN+REAR                 WTLMSIR N+PFH GKSLPARQEDSKLQILS
Subjt:  SSILSLWI--EERGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

A0A5N5IXQ9 Uncharacterized protein ycf689.9e-1271.19Show/hide
Query:  SSILSLWIEERGARQEEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR
        S ILSLW EE+ A  +    +   + SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR
Subjt:  SSILSLWIEERGARQEEDCNMREAR-SWTLMSIRMNHPFHGGKSLPARQEDSKLQILSR

A0A6A5N1D4 Uncharacterized protein1.3e-1161.9Show/hide
Query:  RGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS
        +GA+++EDCNMREAR                 WTLMSIR+NHPFHGGKSLPARQEDSK +ILS
Subjt:  RGARQEEDCNMREAR----------------SWTLMSIRMNHPFHGGKSLPARQEDSKLQILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAAC
GGAACCGGGAAAGTATACAGAAAAGACATCCTCCATTTTGTCTCTGTGGATCGAGGAGAGGGGGGCTCGGCAGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGA
CTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGAAAAGTTGTTCATTTTTCG
GGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAGAGATGTAACTCCAGTTCCTTCGGAAATGCCAAATCTTCTTCATGTAAAACCTGCTTT
ATTTAGATCAGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAAC
GGAACCGGGAAAGTATACAGAAAAGACATCCTCCATTTTGTCTCTGTGGATCGAGGAGAGGGGGGCTCGGCAGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGTTGGA
CTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGAAAAGTTGTTCATTTTTCG
GGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAGAGATGTAACTCCAGTTCCTTCGGAAATGCCAAATCTTCTTCATGTAAAACCTGCTTT
ATTTAGATCAGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAG
Protein sequenceShow/hide protein sequence
MRLCTLRIGIHFLKDSGFRALGYLYDPIDCVKPAVATEPGKYTEKTSSILSLWIEERGARQEEDCNMREARSWTLMSIRMNHPFHGGKSLPARQEDSKLQILSRKVVHFS
GSRRGVETHKNSGMEMERDVTPVPSEMPNLLHVKPALFRSGKSYGFMKPCAMARIRSQSYLR