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Sed0023803 (gene) of Chayote v1 genome

Gene IDSed0023803
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive protein
Genome locationLG01:1899837..1900395
RNA-Seq ExpressionSed0023803
SyntenySed0023803
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015577282.1 auxin-responsive protein SAUR21-like [Ricinus communis]6.2e-2964.95Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MG+RL   IL+K++L+R + +  KT   S EVPKGF AVYVG++ KKRF+VP+SYL  PSFQALL++AEEEFGF HPMG LTIPC EDTFI++TS+L
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

XP_015577284.1 auxin-responsive protein SAUR21-like [Ricinus communis]4.7e-2963.92Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MG+RL   IL+K++L+R + +  K  S S EVPKGF AVYVG++ +KRF++P+SYLK PSFQALL++AEEEFGF HPMG LTIPCRED FI++TS+L
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

XP_015577293.1 auxin-responsive protein SAUR21-like [Ricinus communis]2.1e-2964.95Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MG+RL   IL+K++L+R + +  KT S S EVPKGF AVYVG++ +KRF+VP+SYL  PSFQALL++AEEEFGF HPMG LTIPCRED FI++TS+L
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

XP_022146160.1 auxin-responsive protein SAUR21-like [Momordica charantia]4.3e-3885.57Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MGIRL+S IL+KKVLK CI SER+ ISTSLEVPKGFFAVYV ESL+KR+VVPISYLK PSFQ LLKRAEEEFGFGHPMGSLTIPC EDTFIE+TSRL
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

XP_031285049.1 auxin-responsive protein SAUR21-like [Pistacia vera]9.5e-3068.04Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MGIR+   IL+K+VL + + + +K +STSL+VPKGFFAVYVGE+ KKRFVVP+SYL  P FQ LL +AEEEFGF HPMG LTIPC EDTFI++TSRL
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

TrEMBL top hitse value%identityAlignment
A0A067E748 Uncharacterized protein2.5e-2865.98Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MGIRL   IL+K++L++   + +K  STSL+VPKGF AVYVGE+ +KRF+VP+SYL  P FQ LL RAEEEFGF HPMG LTIPC E+TFI+ITSRL
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

A0A2R6QQ27 Auxin-responsive protein5.1e-2965.31Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG
        M IR+   I +K++L+R  S+  K +ST+++VPKG+ A+YVGES+KKRFVVPISYL  PSFQ LL +AEEEFGF HPMG LTIPCRED FI++TSRLG
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG

A0A2R6QQ79 Auxin-responsive protein3.9e-2967.35Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG
        M IR+   I +KK+L+R  SS  K +S +++VPKG+FAVYVGES KKRFVVPISYL  PSFQ LL +AEEEFGF HPMG LTIPCRED FI++TS+LG
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG

A0A2R6QQ81 Auxin-responsive protein1.9e-2865.31Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG
        M I++   I +K++L+R +S+  K +S +++VPKG+FAVYVGES KKRFVVPISYL  PSFQ LL +AEEEFGF HPMG LTIPCRED FI++TSRLG
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG

A0A6J1CWH9 auxin-responsive protein SAUR21-like2.1e-3885.57Show/hide
Query:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        MGIRL+S IL+KKVLK CI SER+ ISTSLEVPKGFFAVYV ESL+KR+VVPISYLK PSFQ LLKRAEEEFGFGHPMGSLTIPC EDTFIE+TSRL
Subjt:  MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.1e-2461.8Show/hide
Query:  ILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        + S  V K+ +S     +S     PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  ILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

Q9FJF7 Auxin-responsive protein SAUR223.6e-2462.07Show/hide
Query:  LKRCISSERKTISTSL----EVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        L R +   +K +S S       PKGF AVYVGES KKR++VP+SYL  PSFQALL ++E+EFGF HPMG LTIPC EDTFI +TSRL
Subjt:  LKRCISSERKTISTSL----EVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

Q9FJF9 Auxin-responsive protein SAUR215.6e-2564.37Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        +KK+L R         ST+   PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

Q9FJG1 Auxin-responsive protein SAUR192.8e-2462.07Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        +KK+L R       + +     PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

Q9FK62 Auxin-responsive protein SAUR243.6e-2462.07Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        +KK+L R       +       PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family2.0e-2560.47Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSR
        SK++L++       + S+SL+VPKG+ AVYVGE   KRFVVP+SYL  PSFQ LL++AEEEFGF HPMG LTIPC E+ FI++ SR
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSR

AT5G18010.1 SAUR-like auxin-responsive protein family2.0e-2562.07Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        +KK+L R       + +     PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

AT5G18030.1 SAUR-like auxin-responsive protein family4.0e-2664.37Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        +KK+L R         ST+   PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

AT5G18060.1 SAUR-like auxin-responsive protein family1.5e-2561.8Show/hide
Query:  ILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        + S  V K+ +S     +S     PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  ILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL

AT5G18080.1 SAUR-like auxin-responsive protein family2.6e-2562.07Show/hide
Query:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL
        +KK+L R       +       PKGF AVYVGES KKR++VP+SYL  PSFQALL ++EEEFGF HPMG LTIPC EDTFI +TSRL
Subjt:  SKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGGTTAGAGAGTGGTATTCTGTCAAAGAAAGTTCTCAAGAGGTGCATTTCGAGCGAAAGAAAGACAATCTCAACATCATTGGAGGTTCCAAAAGGATTCTT
TGCAGTTTATGTAGGAGAGAGTCTTAAGAAGCGCTTTGTGGTTCCAATATCATACTTAAAACACCCTTCATTTCAGGCTTTGCTTAAAAGAGCTGAAGAAGAATTTGGAT
TTGGTCACCCAATGGGCAGCCTAACTATTCCATGTAGAGAAGATACTTTCATTGAAATCACTTCTAGGCTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
TTCCCTTCGAGTTTTGCAGAACTAACAACGAAAACCCGAGATGGGAATCCGGTTAGAGAGTGGTATTCTGTCAAAGAAAGTTCTCAAGAGGTGCATTTCGAGCGAAAGAA
AGACAATCTCAACATCATTGGAGGTTCCAAAAGGATTCTTTGCAGTTTATGTAGGAGAGAGTCTTAAGAAGCGCTTTGTGGTTCCAATATCATACTTAAAACACCCTTCA
TTTCAGGCTTTGCTTAAAAGAGCTGAAGAAGAATTTGGATTTGGTCACCCAATGGGCAGCCTAACTATTCCATGTAGAGAAGATACTTTCATTGAAATCACTTCTAGGCT
TGGCTAGTAACTCTCTTCAGCACTTCAAAATGAATGCAACCTTTTTTTTAGTACATATTTTGGAGATCGAACCTACGATCTCTAGGTCGAGGATAGCCAATTTCTACTGG
ATTAACTCTACTTTAGCTTAAAATAATTTTTGTGACAAAGCTTTTCAGTTTTATAATCATCCTCCTGAGACTATAGCTGTATGACAGGAAAGCTTACAGAGATTTATCAT
GAATGGAAG
Protein sequenceShow/hide protein sequence
MGIRLESGILSKKVLKRCISSERKTISTSLEVPKGFFAVYVGESLKKRFVVPISYLKHPSFQALLKRAEEEFGFGHPMGSLTIPCREDTFIEITSRLG