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Sed0023808 (gene) of Chayote v1 genome

Gene IDSed0023808
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive protein
Genome locationLG03:45443047..45445903
RNA-Seq ExpressionSed0023808
SyntenySed0023808
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5776.05Show/hide
Query:  MNSFHSQAQSP--AATAAAEYFKMRRWPE-------------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAV
        MN+FHS  QSP  AA AAAEYFKMRRWPE             R +  EE EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDDDD   
Subjt:  MNSFHSQAQSP--AATAAAEYFKMRRWPE-------------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAV

Query:  -----AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
              E S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
Subjt:  -----AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

XP_022938283.1 auxin-responsive protein IAA33 [Cucurbita moschata]4.0e-5674.4Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWP----------------ERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDA
        MN+FHS  QSPA  AAAEYFKMRRWP                E  +  EE EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDDDD  
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWP----------------ERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDA

Query:  V-----AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
               E S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
Subjt:  V-----AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]2.5e-5877.3Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPE-----------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAV----
        MN+FHS  QSPAA AAAEYFKMRRWPE           + Q  EE EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDDDD       
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPE-----------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAV----

Query:  -AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
          E S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRR RGN
Subjt:  -AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]3.9e-5979.38Show/hide
Query:  MNSFHSQAQSP-AATAAAEYFKMRRWPE------------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAE
        MN+FHS  QSP AA AAAEYFKMRRWPE              +  EE EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDDDD    E
Subjt:  MNSFHSQAQSP-AATAAAEYFKMRRWPE------------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAE

Query:  TSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
         S ER+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
Subjt:  TSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]1.4e-5680.13Show/hide
Query:  MNSFHSQ-AQSPAATAAAEYFKMRRWPER----PQAA--EEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDD--DAVAETSSE
        MN+F S+  QSPAA AAAE FKMRRWPER    PQ A  E  EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDD+D      E S E
Subjt:  MNSFHSQ-AQSPAATAAAEYFKMRRWPER----PQAA--EEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDD--DAVAETSSE

Query:  RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
        R+LDLTNAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRI+P+KANSRRGRGN
Subjt:  RRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LH98 Auxin-responsive protein4.0e-5482.52Show/hide
Query:  QSPAATAAAEYFKMRRWPER----PQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHL
        QSPAA AAAEYFKM RW +R    PQ AE  EDFAAVIPPVTV LEGRAIC RISLHKH SYESLAKALRRMFVDDDD+   E S ER LDLTNAVPG++
Subjt:  QSPAATAAAEYFKMRRWPER----PQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHL

Query:  VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
        VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Subjt:  VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

A0A1S3BRI6 Auxin-responsive protein3.6e-5583.22Show/hide
Query:  QSPAATAAAEYFKMRRWPER----PQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHL
        QSPAA AAAEYFKM RW ER    PQ AE  EDF+AVIPPVTV LEGRAIC RISLHKH SYESLAKALRRMFVDDDD+   E S ERRLDLTNAVPG++
Subjt:  QSPAATAAAEYFKMRRWPER----PQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHL

Query:  VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
        VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Subjt:  VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

A0A6J1DKE3 Auxin-responsive protein2.3e-4976.19Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAET-SSERRLDLTNA
        M S  S+ Q     AAAEY K RRWPER   A E ED +AVIP VTV LEGRAIC RISLHKHASYESLAKALR MFV +DD    ++ S ERRLDL+NA
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAET-SSERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG
        VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRG
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG

A0A6J1FIF6 Auxin-responsive protein1.9e-5674.4Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWP----------------ERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDA
        MN+FHS  QSPA  AAAEYFKMRRWP                E  +  EE EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDDDD  
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWP----------------ERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDA

Query:  V-----AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
               E S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
Subjt:  V-----AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

A0A6J1I3D9 Auxin-responsive protein1.2e-5877.3Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPE-----------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAV----
        MN+FHS  QSPAA AAAEYFKMRRWPE           + Q  EE EDFAAVIPPVTV LEGRAIC RISLHKHASYESLAKALRRMFVDDDD       
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPE-----------RPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAV----

Query:  -AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
          E S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRR RGN
Subjt:  -AETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

SwissProt top hitse value%identityAlignment
A2XB18 Auxin-responsive protein IAA103.6e-0733.98Show/hide
Query:  EEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRI
        EE E    V   V V ++G  I  ++ L+ H SY++LA AL  MF        A  ++     L N+   + + YED + D +L GD+ W  FV   KR+
Subjt:  EEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRI

Query:  RIL
        RI+
Subjt:  RIL

P0C128 Auxin-responsive protein IAA254.2e-0834.62Show/hide
Query:  AAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAK
        AA+E    + +   V V LEG A+  +I L  H SY+SL++AL+ MF     D +A   +E +     +   +++ YED E D +L GD+ W  F+   K
Subjt:  AAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAK

Query:  RIRI
        R+ I
Subjt:  RIRI

Q38831 Auxin-responsive protein IAA132.5e-0828.68Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA
        MNS  +   + +A    E  K +   + P+   +  +    +  + V ++G AI  ++ L+ H+SYE+LA+ L  MF   +   V  TS   + L L + 
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
            ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q6K846 Auxin-responsive protein IAA91.7e-0938.46Show/hide
Query:  VTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V  EG AI  ++ L  H+SY+ LA  L RMF  +D     + +++   D      G +V YED + D +L GD+ W+DF R  KR++IL
Subjt:  VTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q9FKM7 Auxin-responsive protein IAA332.6e-3466.97Show/hide
Query:  AAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIK
        ++V+PPVTV LEGR+IC RISL KH SY+SLA ALR+MFVD  D       S   LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILP+K
Subjt:  AAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIK

Query:  ANSRRGRGN
         N+R+ + N
Subjt:  ANSRRGRGN

Arabidopsis top hitse value%identityAlignment
AT1G04550.2 AUX/IAA transcriptional regulator family protein5.6e-0832.97Show/hide
Query:  VTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V ++G  I  ++ +  H+SYE+LA+ L  MF         E    + L L +     ++ YED E D +L GD+ W  F+   KR+RI+
Subjt:  VTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.1 auxin-induced protein 131.8e-0928.68Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA
        MNS  +   + +A    E  K +   + P+   +  +    +  + V ++G AI  ++ L+ H+SYE+LA+ L  MF   +   V  TS   + L L + 
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
            ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.2 auxin-induced protein 131.8e-0928.68Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA
        MNS  +   + +A    E  K +   + P+   +  +    +  + V ++G AI  ++ L+ H+SYE+LA+ L  MF   +   V  TS   + L L + 
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
            ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.3 auxin-induced protein 131.8e-0928.68Show/hide
Query:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA
        MNS  +   + +A    E  K +   + P+   +  +    +  + V ++G AI  ++ L+ H+SYE+LA+ L  MF   +   V  TS   + L L + 
Subjt:  MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSS-ERRLDLTNA

Query:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
            ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT5G57420.1 indole-3-acetic acid inducible 331.9e-3566.97Show/hide
Query:  AAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIK
        ++V+PPVTV LEGR+IC RISL KH SY+SLA ALR+MFVD  D       S   LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILP+K
Subjt:  AAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIK

Query:  ANSRRGRGN
         N+R+ + N
Subjt:  ANSRRGRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGCTTCCACTCTCAAGCGCAATCCCCTGCCGCCACCGCCGCAGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCCTCAGGCGGCGGAAGAGGCGGAGGA
TTTTGCGGCGGTGATTCCACCGGTGACGGTGGCGCTGGAAGGGAGGGCGATCTGCCACCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAAGCCCTCC
GCAGGATGTTTGTCGACGATGACGATGACGCTGTGGCTGAAACCTCGAGCGAGCGGCGGCTCGACCTCACCAACGCCGTTCCGGGTCACCTTGTTGCTTATGAAGATATT
GAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAA
TTAA
mRNA sequenceShow/hide mRNA sequence
ATTCTTTTCTTTTTCTTTCTTAAAATCTCTCAAAAACAAAAAAAGTAAACCTTAGCCATGAACAGCTTCCACTCTCAAGCGCAATCCCCTGCCGCCACCGCCGCAGCCGA
GTACTTCAAGATGAGGCGGTGGCCGGAGAGGCCTCAGGCGGCGGAAGAGGCGGAGGATTTTGCGGCGGTGATTCCACCGGTGACGGTGGCGCTGGAAGGGAGGGCGATCT
GCCACCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAAGCCCTCCGCAGGATGTTTGTCGACGATGACGATGACGCTGTGGCTGAAACCTCGAGCGAG
CGGCGGCTCGACCTCACCAACGCCGTTCCGGGTCACCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGT
GGCGAAGAGAATTCGAATACTGCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAAATTATTATGTGTTAAGTATCTATTTTGTGTTATAAAAAAAAAATATATT
TTGTGAGAGC
Protein sequenceShow/hide protein sequence
MNSFHSQAQSPAATAAAEYFKMRRWPERPQAAEEAEDFAAVIPPVTVALEGRAICHRISLHKHASYESLAKALRRMFVDDDDDAVAETSSERRLDLTNAVPGHLVAYEDI
ENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN