; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023811 (gene) of Chayote v1 genome

Gene IDSed0023811
OrganismSechium edule (Chayote v1)
DescriptionPolyadenylate-binding protein 2-like
Genome locationLG10:6298965..6303277
RNA-Seq ExpressionSed0023811
SyntenySed0023811
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036316.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa]3.7e-10393.4Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        ME+EEHEVYGGEIPVEEGD+DMSAADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AV+QE KEEADSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYR RRPY PPYFYSPY GYGK 
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM

Query:  PRFRRPMRYMPY
        PRFRRPMRYMPY
Subjt:  PRFRRPMRYMPY

KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-10292.42Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        M++EEHEVYGGEIPVEEGDVDM+AADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA V+QE KEE DSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP
        QQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEA+QEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYMGYR RRPY PPYFYSPYGYGK P
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP

Query:  RFRRPMRYMPY
        R+RRPMRYMPY
Subjt:  RFRRPMRYMPY

XP_004143458.1 polyadenylate-binding protein 3 isoform X1 [Cucumis sativus]8.2e-10393.4Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        ME+EEHEVYGGEIPVEEGD+DMSA DDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AV+QE KEEADSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAIQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYR RRPY PPYFYSPY GYGK 
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM

Query:  PRFRRPMRYMPY
        PRFRRPMRYMPY
Subjt:  PRFRRPMRYMPY

XP_022132734.1 polyadenylate-binding protein 3-like isoform X1 [Momordica charantia]3.7e-10393.84Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        ME+EEHEVYGGEIPVEE DVDMSAADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAV+QE KEE DSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEA+QEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYR RRPY PPYFYSPYGYGK P
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP

Query:  RFRRPMRYMPY
        RFRR M+YMPY
Subjt:  RFRRPMRYMPY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]1.7e-10393.87Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        M++EEHEVYGGEIPVEEGD+DMSAADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AV+QE KEEADSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEA+QEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYR RRPY PPYFYSPY GYGK 
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM

Query:  PRFRRPMRYMPY
        PRFRRPMRYMPY
Subjt:  PRFRRPMRYMPY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein4.0e-10393.4Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        ME+EEHEVYGGEIPVEEGD+DMSA DDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AV+QE KEEADSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAIQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYR RRPY PPYFYSPY GYGK 
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM

Query:  PRFRRPMRYMPY
        PRFRRPMRYMPY
Subjt:  PRFRRPMRYMPY

A0A5A7T2C2 Polyadenylate-binding protein 2-like1.8e-10393.4Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        ME+EEHEVYGGEIPVEEGD+DMSAADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AV+QE KEEADSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYR RRPY PPYFYSPY GYGK 
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY-GYGKM

Query:  PRFRRPMRYMPY
        PRFRRPMRYMPY
Subjt:  PRFRRPMRYMPY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X11.8e-10393.84Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        ME+EEHEVYGGEIPVEE DVDMSAADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAV+QE KEE DSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP
        QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEA+QEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYR RRPY PPYFYSPYGYGK P
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP

Query:  RFRRPMRYMPY
        RFRR M+YMPY
Subjt:  RFRRPMRYMPY

A0A6J1HIK8 polyadenylate-binding protein 3-like5.2e-10392.42Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        M++EEHEVYGGEIPVEEGDVDM+AADDD AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA V+QE KEE DSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP
        QQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEA+QEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYMGYR RRPY PPYFYSPYGYGK P
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP

Query:  RFRRPMRYMPY
        R+RRPMRYMPY
Subjt:  RFRRPMRYMPY

A0A6J1KVH8 polyadenylate-binding protein 3-like6.8e-10392.42Show/hide
Query:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV
        M++EEHEVYGGEIPVEEGDVDMSAADD+ AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GAAV+QE KEE DSRSVFVGNVDYACTPEEV
Subjt:  MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEV

Query:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP
        QQHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEA+QEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYMGYR RRPY PPYFYSPYGYGK P
Subjt:  QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMP

Query:  RFRRPMRYMPY
        R+RRPMRYMPY
Subjt:  RFRRPMRYMPY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 21.4e-3358.16Show/hide
Query:  DAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGF
        D   KEL EMK+R+ EME EAA LR MQ +++ E  A+++          KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF GHPKGF
Subjt:  DAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGF

Query:  AYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQ
        AY+EF E   +  ALLLN S LH R LKV  KRTNVPGM +
Subjt:  AYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQ

Q86U42 Polyadenylate-binding protein 21.8e-3147.42Show/hide
Query:  EGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAA---VNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV
        EGD    A +D     EL+ +K R++EMEEEA  L+E+Q +VEK+M     P  A    ++ E K EAD+RS++VGNVDY  T EE++ HF  CG+VNRV
Subjt:  EGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAA---VNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRV

Query:  TILTDKF-GHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRP---YAPPYFYSPYGYGKMPRFR
        TIL DKF GHPKGFAY+EF + E+++ +L L+ES   GRQ+KV  KRTN PG+      R  P   YR R      +   FYS  G+   PR R
Subjt:  TILTDKF-GHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRP---YAPPYFYSPYGYGKMPRFR

Q93VI4 Polyadenylate-binding protein 11.2e-6763.16Show/hide
Query:  EDEEHEVYGGEIPVEE-------------GDVDMSAADDD----AAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSR
        +++EHEVYGGEIP EE             G+   +A D++    ++ ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  V+   KEE DSR
Subjt:  EDEEHEVYGGEIPVEE-------------GDVDMSAADDD----AAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EA+Q +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P   +RP R 
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRP

Query:  YAPPY-FYSPYGYGKMPRFRRPMRYMPY
        + P   FY PY YG++PRFRRPMRY PY
Subjt:  YAPPY-FYSPYGYGKMPRFRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 22.7e-8878.38Show/hide
Query:  MEDEEHEVYGGEIP----------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGN
        ME+EEHEVYGGEIP              D+DM+AADDD A+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A NQ GKEE D+RSVFVGN
Subjt:  MEDEEHEVYGGEIP----------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGN

Query:  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYF
        VDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEF+E EA+QEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R++PYMGYR RRP+  PY 
Subjt:  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYF

Query:  YSPYGYGKMPRFRRPMRYMPYQ
        YSPYGYGK PRFRRPMRYMPYQ
Subjt:  YSPYGYGKMPRFRRPMRYMPYQ

Q9LX90 Polyadenylate-binding protein 35.7e-9180.28Show/hide
Query:  MEDEEHEVYGGEIP------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYA
        ME+EEHEVYGGEIP      V + D+DMSAAD+D A+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A NQEGKEE D+RSV+VGNVDYA
Subjt:  MEDEEHEVYGGEIP------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYA

Query:  CTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY
        CTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EA+QEAL LNESELHGRQLKV  KRTNVPGMKQY P R++P MGYR RRP+ PPYFYSPY
Subjt:  CTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY

Query:  GYGKMPRFRRPMRYMPYQ
        GYGK PRFRRPMRYMPYQ
Subjt:  GYGKMPRFRRPMRYMPYQ

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-9280.28Show/hide
Query:  MEDEEHEVYGGEIP------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYA
        ME+EEHEVYGGEIP      V + D+DMSAAD+D A+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A NQEGKEE D+RSV+VGNVDYA
Subjt:  MEDEEHEVYGGEIP------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYA

Query:  CTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY
        CTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EA+QEAL LNESELHGRQLKV  KRTNVPGMKQY P R++P MGYR RRP+ PPYFYSPY
Subjt:  CTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY

Query:  GYGKMPRFRRPMRYMPYQ
        GYGK PRFRRPMRYMPYQ
Subjt:  GYGKMPRFRRPMRYMPYQ

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-8379.31Show/hide
Query:  MEDEEHEVYGGEIP------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYA
        ME+EEHEVYGGEIP      V + D+DMSAAD+D A+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A NQEGKEE D+RSV+VGNVDYA
Subjt:  MEDEEHEVYGGEIP------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYA

Query:  CTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY
        CTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EA+QEAL LNESELHGRQLKV  KRTNVPGMKQY P R++P MGYR RRP+ PPYFYSPY
Subjt:  CTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPY

Query:  GYG
        GYG
Subjt:  GYG

AT5G51120.1 polyadenylate-binding protein 18.3e-6963.16Show/hide
Query:  EDEEHEVYGGEIPVEE-------------GDVDMSAADDD----AAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSR
        +++EHEVYGGEIP EE             G+   +A D++    ++ ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  V+   KEE DSR
Subjt:  EDEEHEVYGGEIPVEE-------------GDVDMSAADDD----AAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EA+Q +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P   +RP R 
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRP

Query:  YAPPY-FYSPYGYGKMPRFRRPMRYMPY
        + P   FY PY YG++PRFRRPMRY PY
Subjt:  YAPPY-FYSPYGYGKMPRFRRPMRYMPY

AT5G51120.2 polyadenylate-binding protein 13.4e-6253.21Show/hide
Query:  EDEEHEVYGGEIPVEE-------------GDVDMSAADDD----AAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +++EHEVYGGEIP EE             G+   +A D++    ++ ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EDEEHEVYGGEIPVEE-------------GDVDMSAADDD----AAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESE
                           +   + V+   KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EA+Q +L+LNESE
Subjt:  -------------------DPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESE

Query:  LHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPY-FYSPYGYGKMPRFRRPMRYMPY
        LHGRQ+KV  KRTNVPGM+Q F  R  P   +RP R + P   FY PY YG++PRFRRPMRY PY
Subjt:  LHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPY-FYSPYGYGKMPRFRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-8978.38Show/hide
Query:  MEDEEHEVYGGEIP----------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGN
        ME+EEHEVYGGEIP              D+DM+AADDD A+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A NQ GKEE D+RSVFVGN
Subjt:  MEDEEHEVYGGEIP----------VEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGN

Query:  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYF
        VDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEF+E EA+QEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R++PYMGYR RRP+  PY 
Subjt:  VDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYF

Query:  YSPYGYGKMPRFRRPMRYMPYQ
        YSPYGYGK PRFRRPMRYMPYQ
Subjt:  YSPYGYGKMPRFRRPMRYMPYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACGAAGAGCACGAGGTCTACGGCGGAGAGATCCCCGTCGAGGAAGGCGACGTCGACATGTCCGCCGCCGACGACGACGCCGCCATCAAGGAACTGGACGAGAT
GAAGAAGCGGCTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAGAAAGAAATGGGCGCTGTTCAAGATCCCGCCGGTGCGGCTGTAA
ATCAAGAAGGCAAGGAGGAGGCAGATTCGCGATCCGTGTTTGTTGGCAATGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTA
AACAGGGTTACCATTCTTACAGATAAATTTGGTCATCCCAAAGGTTTTGCTTATGTGGAGTTCCTTGAAGCCGAAGCTATTCAGGAGGCACTTCTTTTAAACGAGTCGGA
GTTGCATGGAAGACAACTGAAGGTTCAACAGAAGCGAACCAATGTTCCTGGGATGAAGCAATACTTTCCTCAGCGTTACAGTCCTTACATGGGTTATCGACCCAGGAGGC
CTTATGCACCCCCTTATTTTTACTCACCATATGGATATGGGAAGATGCCCCGTTTCCGAAGGCCTATGCGATACATGCCGTACCAATAA
mRNA sequenceShow/hide mRNA sequence
AAAATGGTTCACGATTGGGATTTTTGTGGATTGCCCTACATCAGATTGCAAACGCCGGTTCAGGCACAGACTGAGATAGCTAACCAGGAAGGGCGAAAATGGAGGACGAA
GAGCACGAGGTCTACGGCGGAGAGATCCCCGTCGAGGAAGGCGACGTCGACATGTCCGCCGCCGACGACGACGCCGCCATCAAGGAACTGGACGAGATGAAGAAGCGGCT
GAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTAGAGAAAGAAATGGGCGCTGTTCAAGATCCCGCCGGTGCGGCTGTAAATCAAGAAGGCA
AGGAGGAGGCAGATTCGCGATCCGTGTTTGTTGGCAATGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTAAACAGGGTTACC
ATTCTTACAGATAAATTTGGTCATCCCAAAGGTTTTGCTTATGTGGAGTTCCTTGAAGCCGAAGCTATTCAGGAGGCACTTCTTTTAAACGAGTCGGAGTTGCATGGAAG
ACAACTGAAGGTTCAACAGAAGCGAACCAATGTTCCTGGGATGAAGCAATACTTTCCTCAGCGTTACAGTCCTTACATGGGTTATCGACCCAGGAGGCCTTATGCACCCC
CTTATTTTTACTCACCATATGGATATGGGAAGATGCCCCGTTTCCGAAGGCCTATGCGATACATGCCGTACCAATAATCTAGGAGGGCTTTGCCTATAATTAGACTACCG
TATAACTATAATATAAAGACTTTACTCTGATTTAAATCCCTAATAGGACTGTGGGTTTGATTATTATCAAGCCTTTCGATTTGCAATTACATAAATGATTCAATGTATGA
GATATGATAAATGTTCATCAGAAACCTTTTTGTATGCTTATTTTATGTGATGTGGTATTCAGACTTCAGCTGTTTAGAACCATTTAGGTAGAGTAGGTTTCTGGAATTTA
TCTTCTCAAGTGATTTCCCTTAGCTACAGTTACAGTACTTTTGAATAGAAATGCAATGTTATATCATGTCAAATTTAATTTTAGATGAGGTTATGAGTTTTATCTA
Protein sequenceShow/hide protein sequence
MEDEEHEVYGGEIPVEEGDVDMSAADDDAAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVNQEGKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTV
NRVTILTDKFGHPKGFAYVEFLEAEAIQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYSPYMGYRPRRPYAPPYFYSPYGYGKMPRFRRPMRYMPYQ