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Sed0023812 (gene) of Chayote v1 genome

Gene IDSed0023812
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain-containing protein
Genome locationLG11:6242178..6242859
RNA-Seq ExpressionSed0023812
SyntenySed0023812
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598890.1 Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia]7.4e-4461.99Show/hide
Query:  GGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLA
        G   SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL+
Subjt:  GGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLA

Query:  SIARRLTAAAKSAAKTGQTRPCVVAGGGE-LKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH
        SIAR+LTAAAKSA +     PCV  GGG+  KAP   + A+SRQW+P LDTI+EK +   +QSD +DKHN+
Subjt:  SIARRLTAAAKSAAKTGQTRPCVVAGGGE-LKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH

KAG7029841.1 hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4662.79Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MGGC+SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGE-LKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH
        +SIAR+LTAAAKSA +     PCV  GGG+  KAP   + A+SRQW+P LDTI+EK +   ++SD +DKHN+
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGE-LKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH

XP_008460258.1 PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo]8.4e-4870.7Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MGGC+S R     S++ +AAD+VQVVH NGHVQ F +PITA QVA K PPP+EYF+CTAA LVS A SPAL+PDAVLQ GKVYF+LP STLHPDVS ADL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP
        ASIARRLTAAAKSAAK+G   PC  A GG E K  A+G   +SRQWRP+LDTIKEKP
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP

XP_011650123.1 uncharacterized protein LOC105434722 [Cucumis sativus]6.4e-4869.87Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MGGC+S R   + S A +AAD+VQVVH NGHVQ F +PITA QVA + PPP+EYF+CTAA LVS A SPALNPD VLQ GKVYF+LPLSTLHPDVS ADL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKP
        ASIARRLTAAAKSAAK+G   PC  A GGE       +A +SRQWRP+LDTI+EKP
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKP

XP_022996489.1 uncharacterized protein LOC111491721 [Cucurbita maxima]1.8e-4562.79Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MG C+SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVAGGG-ELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH
        +SIAR+LTAAAKSA +     PCV  GGG + KAP    AA+SRQW+P LDTI+EK +   ++SD +DKHN+
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVAGGG-ELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH

TrEMBL top hitse value%identityAlignment
A0A0A0LHC0 Uncharacterized protein3.1e-4869.87Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MGGC+S R   + S A +AAD+VQVVH NGHVQ F +PITA QVA + PPP+EYF+CTAA LVS A SPALNPD VLQ GKVYF+LPLSTLHPDVS ADL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKP
        ASIARRLTAAAKSAAK+G   PC  A GGE       +A +SRQWRP+LDTI+EKP
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKP

A0A1S3CC70 uncharacterized protein LOC1034991344.1e-4870.7Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MGGC+S R     S++ +AAD+VQVVH NGHVQ F +PITA QVA K PPP+EYF+CTAA LVS A SPAL+PDAVLQ GKVYF+LP STLHPDVS ADL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP
        ASIARRLTAAAKSAAK+G   PC  A GG E K  A+G   +SRQWRP+LDTIKEKP
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP

A0A5D3CAJ8 DUF4228 domain-containing protein4.1e-4870.7Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MGGC+S R     S++ +AAD+VQVVH NGHVQ F +PITA QVA K PPP+EYF+CTAA LVS A SPAL+PDAVLQ GKVYF+LP STLHPDVS ADL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP
        ASIARRLTAAAKSAAK+G   PC  A GG E K  A+G   +SRQWRP+LDTIKEKP
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVA-GGGELKAPASGSAARSRQWRPVLDTIKEKP

A0A6A2Y6W9 OSBP(Oxysterol binding protein)-related protein 4B1.3e-2243.37Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MG CLS    S+ S   ++ + V+V+H NGHV+ F  PIT  +V    P   + +LCTAA L+S AG+  LNPDA LQ G +YF+LP STL  DVSP D+
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFE
        AS+ +RLTA AKS   + +T P     GG  +         +R W+P+LDTI+E      + SD +
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFE

A0A6J1K8V3 uncharacterized protein LOC1114917218.5e-4662.79Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MG C+SRR     S+AV+AAD +Q+VH NGHVQ F +PITA QV    PPP+EYF+ TAA LVS+A SPALNPDA+LQ GKVYF+LP STLHPDVSP+DL
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTGQTRPCVVAGGG-ELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH
        +SIAR+LTAAAKSA +     PCV  GGG + KAP    AA+SRQW+P LDTI+EK +   ++SD +DKHN+
Subjt:  ASIARRLTAAAKSAAKTGQTRPCVVAGGG-ELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21010.1 unknown protein9.1e-0825.61Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPP----------PSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLST
        MG C+S R+  +     +++  V++V  NG ++ ++ P+ A QV E              PS YF+C +  L      PA+  +  LQA ++YF+LP+S 
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPP----------PSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLST

Query:  LHPDVSPADLASIARRLTAAAKSAAKTGQTR-------PCVVAGGGELKAPASGSAARSRQWRP
            ++ +D+A++A + + A +++ K    R       P ++  G       +GS    ++ RP
Subjt:  LHPDVSPADLASIARRLTAAAKSAAKTGQTR-------PCVVAGGGELKAPASGSAARSRQWRP

AT1G29195.1 unknown protein1.2e-0433.33Show/hide
Query:  AADKVQVVHQNGHVQLFSTPITAHQVAEKRP------PPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLP
        A D +++VH NGHV+  S  ITA ++ +  P      P S         ++S      + P+A LQ GK+YF++P
Subjt:  AADKVQVVHQNGHVQLFSTPITAHQVAEKRP------PPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLP

AT1G76600.1 unknown protein5.3e-0826.49Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKR-------PPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHP
        MG C+S  +   VS++ +A    ++V  NG ++ +  P+ A QV E            S YFLC +  L      PA+  D +LQA ++YF+LP+S    
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKR-------PPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHP

Query:  DVSPADLASIARRLTAAAKSAA-------KTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH
         +S +D+A++A + + A + AA       ++G+  P V          A   A  +R      + + +K  + N  + F+D + +
Subjt:  DVSPADLASIARRLTAAAKSAA-------KTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNH

AT2G30230.1 unknown protein2.7e-0428.99Show/hide
Query:  AADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLP
        A D +++VH NGHV   ++P+TA ++ +  P       C+  ++  +     L+P++ L+ G +YF++P
Subjt:  AADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLP

AT5G66580.1 unknown protein4.7e-0424.58Show/hide
Query:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL
        MG C SR            +D  +++  +G +Q FS+P+   Q+ +K P     F+C +  +       A+  +  L++G++YF+LPL+ L+  +   ++
Subjt:  MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADL

Query:  ASIARRLTAAAKSAAKTG
        A++A + ++A   +   G
Subjt:  ASIARRLTAAAKSAAKTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCTGTCTCTCCCGCCGACAACCCTCCGCCGTGTCCGCCGCCGTGAGCGCCGCCGACAAGGTCCAAGTGGTCCATCAGAACGGCCACGTCCAACTGTTTTCCAC
CCCCATCACGGCCCACCAGGTGGCCGAAAAGCGGCCGCCGCCGTCGGAGTACTTCCTGTGCACGGCGGCGATGCTGGTGTCCGTCGCCGGGAGCCCGGCGCTGAACCCCG
ACGCCGTTCTTCAGGCTGGGAAGGTTTATTTCATGCTCCCGCTCTCCACCCTCCATCCCGACGTTTCTCCCGCCGATCTGGCTTCCATCGCCAGAAGGCTCACCGCCGCC
GCGAAGTCCGCCGCGAAGACCGGCCAGACGCGGCCGTGCGTGGTGGCTGGCGGCGGCGAATTGAAGGCTCCGGCGTCGGGGTCGGCGGCGAGGTCGAGACAGTGGCGGCC
GGTTCTGGACACCATTAAGGAGAAGCCGATGATGATTAATAATCAATCAGATTTTGAAGACAAACATAATCATTTGTATGTTTATGAATCTAATTATCACGAATAA
mRNA sequenceShow/hide mRNA sequence
CTTCTTTTCTCCAAAACAAAAGGAGATTCATTTCCTTTTTTTCTCAAAATTAAGGAAATTTATTTCTTTTTTTTTTCTAGAAACCAAAACACCAAAATGGGTGGCTGTCT
CTCCCGCCGACAACCCTCCGCCGTGTCCGCCGCCGTGAGCGCCGCCGACAAGGTCCAAGTGGTCCATCAGAACGGCCACGTCCAACTGTTTTCCACCCCCATCACGGCCC
ACCAGGTGGCCGAAAAGCGGCCGCCGCCGTCGGAGTACTTCCTGTGCACGGCGGCGATGCTGGTGTCCGTCGCCGGGAGCCCGGCGCTGAACCCCGACGCCGTTCTTCAG
GCTGGGAAGGTTTATTTCATGCTCCCGCTCTCCACCCTCCATCCCGACGTTTCTCCCGCCGATCTGGCTTCCATCGCCAGAAGGCTCACCGCCGCCGCGAAGTCCGCCGC
GAAGACCGGCCAGACGCGGCCGTGCGTGGTGGCTGGCGGCGGCGAATTGAAGGCTCCGGCGTCGGGGTCGGCGGCGAGGTCGAGACAGTGGCGGCCGGTTCTGGACACCA
TTAAGGAGAAGCCGATGATGATTAATAATCAATCAGATTTTGAAGACAAACATAATCATTTGTATGTTTATGAATCTAATTATCACGAATAATTTATTAAATTTCCTTTT
TCTTTTCTTCCCTCAATCATCC
Protein sequenceShow/hide protein sequence
MGGCLSRRQPSAVSAAVSAADKVQVVHQNGHVQLFSTPITAHQVAEKRPPPSEYFLCTAAMLVSVAGSPALNPDAVLQAGKVYFMLPLSTLHPDVSPADLASIARRLTAA
AKSAAKTGQTRPCVVAGGGELKAPASGSAARSRQWRPVLDTIKEKPMMINNQSDFEDKHNHLYVYESNYHE