CuGenDBv2

Gene ID	Sed0023819
Organism	Sechium edule (Chayote v1)
Description	hybrid signal transduction histidine kinase L
Genome location	LG06:41175262..41177090
RNA-Seq Expression	Sed0023819
Synteny	Sed0023819
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8648720.1 hypothetical protein Csa_008998 [Cucumis sativus]

1.3e-53

70.16

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Query:  MSEFQQQ--QQPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPN
        MSE QQQ  QQ QQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P 
Subjt:  MSEFQQQ--QQPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPN

Query:  LHPDKGGDVEFGIDFRNPSGKGKFPPEANG------GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        LHPDK GD+EFG D RNPSGKGKFP   NG      G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE DFNFKAAGH
Subjt:  LHPDKGGDVEFGIDFRNPSGKGKFPPEANG------GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

XP_008446202.1 PREDICTED: hybrid signal transduction histidine kinase L [Cucumis melo]

2.3e-55

71.43

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Query:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL
        MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P L
Subjt:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL

Query:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        HPDK GD+EFG D RNPSGKGKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE DFNFKA GH
Subjt:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

XP_011655621.2 la-related protein Larp4B [Cucumis sativus]

1.3e-53

70.16

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Query:  MSEFQQQ--QQPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPN
        MSE QQQ  QQ QQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P 
Subjt:  MSEFQQQ--QQPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPN

Query:  LHPDKGGDVEFGIDFRNPSGKGKFPPEANG------GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        LHPDK GD+EFG D RNPSGKGKFP   NG      G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE DFNFKAAGH
Subjt:  LHPDKGGDVEFGIDFRNPSGKGKFPPEANG------GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

XP_022945533.1 uncharacterized protein LOC111449741 [Cucurbita moschata]

3.7e-53

70.29

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Query:  MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGG
        MSEFQQQQQPQQ Q QPQQ ALVYP++ A  +PP  HHS+GSFG VFIVL VIVV+S+LACFLGRLCNRRV NQR KPEKTHGG+  +GK+P LHPDK G
Subjt:  MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGG

Query:  DVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHE-VDFNFKAAGHA
        D+EFG D RNP+GK  FPP  NGG    K NG+GN N HGNSFK F+NGG    EIKH DHHE VD NF+A GHA
Subjt:  DVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHE-VDFNFKAAGHA

XP_038892720.1 uncharacterized protein LOC120081701 [Benincasa hispida]

2.2e-58

74.03

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Query:  MSEFQQQQQPQQQQLQPQQPALVYPNTAA--ASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARPKGKQPNLHPD
        MSE QQQQQ Q QQ Q QQPA VYPNTAA   SQPP  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEKTH GARP+GK+P LHPD
Subjt:  MSEFQQQQQPQQQQLQPQQPALVYPNTAA--ASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARPKGKQPNLHPD

Query:  KGGDVEFGIDFRNPSG-KGKFPPEANGGISKGKANGHGNS----NGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        K GD+EFG D RNP+G KGKFP     G SKGK+NG+GN     NGHGNSFK FENGG    EIKH DHHE DFNFKAAGH
Subjt:  KGGDVEFGIDFRNPSG-KGKFPPEANGGISKGKANGHGNS----NGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BF63 hybrid signal transduction histidine kinase L

1.1e-55

71.43

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Query:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL
        MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P L
Subjt:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL

Query:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        HPDK GD+EFG D RNPSGKGKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE DFNFKA GH
Subjt:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

A0A5A7ST81 Hybrid signal transduction histidine kinase L

1.1e-55

71.43

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Query:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL
        MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P L
Subjt:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL

Query:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        HPDK GD+EFG D RNPSGKGKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE DFNFKA GH
Subjt:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

A0A6J1G163 uncharacterized protein LOC111449741

1.8e-53

70.29

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Query:  MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGG
        MSEFQQQQQPQQ Q QPQQ ALVYP++ A  +PP  HHS+GSFG VFIVL VIVV+S+LACFLGRLCNRRV NQR KPEKTHGG+  +GK+P LHPDK G
Subjt:  MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGG

Query:  DVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHE-VDFNFKAAGHA
        D+EFG D RNP+GK  FPP  NGG    K NG+GN N HGNSFK F+NGG    EIKH DHHE VD NF+A GHA
Subjt:  DVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHE-VDFNFKAAGHA

A0A6J1HP92 uncharacterized protein LOC111466471

3.9e-53

68.97

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Query:  MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGG
        MSEFQQQQQ  QQ  QPQQ ALVYP++ A  +PPS HHS+GSFG VFIVL VIVV+S+LACFLGRLCNRRV NQR KPEKTHG +  +GK+P LHPDK G
Subjt:  MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGG

Query:  DVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGHA
        D+EFG D RNP+GK  FPP  NGG    K NG+ + N HGNSFK FENGG    EIKH DHHEVD NF+A GHA
Subjt:  DVEFGIDFRNPSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGHA

E5GBJ1 Uncharacterized protein

1.1e-55

71.43

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Query:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL
        MSE QQQQ QPQQQQ Q QQPA VYP+TA   A SQ P  HHS+GSFG VFIVL VIVVIS+LACFLGRLCNRRV+N QRPKPEK+H GARP +GK+P L
Subjt:  MSEFQQQQ-QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQN-QRPKPEKTHGGARP-KGKQPNL

Query:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH
        HPDK GD+EFG D RNPSGKGKFPP  NG     G SKGK NG+G       NGHGNSFK FENGG    EIKH DHHE DFNFKA GH
Subjt:  HPDKGGDVEFGIDFRNPSGKGKFPPEANG-----GISKGKANGHG-----NSNGHGNSFKSFENGG----EIKHNDHHEVDFNFKAAGH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G23530.1 unknown protein

5.3e-10

35.93

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Query:  QPQQPALVYPNT------AAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNR------RVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVE
        Q QQP +VYPN         +++P S   SSG+FG VFIVL VI V+S+LAC  GRLCNR      +  ++ PK EK       + +     P + GD++
Subjt:  QPQQPALVYPNT------AAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNR------RVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVE

Query:  FGIDFRNPSGKGKFPPEANGG--ISKGKANGHGNSNGHGNSFKSFENGGEIKHNDHHEVDFNFKAAG
        FG D + P    K P   +GG  I  G  N  G     G        GG    N  H V F     G
Subjt:  FGIDFRNPSGKGKFPPEANGG--ISKGKANGHGNSNGHGNSFKSFENGGEIKHNDHHEVDFNFKAAG

AT1G70470.1 unknown protein

2.4e-10

40.82

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Query:  QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNR-------RVQNQRPKPEKTHGGARPKGKQPNLHPDK
        QPQ+ Q QPQ    VYP+T+   ++S  PS   SSGSFG  FIVL  I+V+++LAC  GRLCNR       +  N+  K EK       + +     P +
Subjt:  QPQQQQLQPQQPALVYPNTA---AASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNR-------RVQNQRPKPEKTHGGARPKGKQPNLHPDK

Query:  GGDVEFGIDFRNPSGKGKFPPEANGG-ISKGKANGHGNSNGHGNSFK
         GDVEFG D + P    K P   NGG I  G  N  G   G G   K
Subjt:  GGDVEFGIDFRNPSGKGKFPPEANGG-ISKGKANGHGNSNGHGNSFK

Sequences

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CDS sequence

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ATGTCGGAGTTTCAACAACAACAACAACCGCAACAACAACAACTTCAGCCACAGCAGCCAGCTTTGGTTTATCCGAACACCGCTGCGGCCAGCCAGCCTCCTTCCCACCA
CCATTCCAGCGGCTCCTTCGGAGGCGTTTTCATAGTTCTCGGCGTCATTGTCGTCATATCATCTCTTGCTTGCTTCCTCGGCCGCCTCTGCAACCGGCGAGTCCAAAACC
AGAGGCCGAAGCCCGAGAAGACCCACGGCGGCGCTCGGCCTAAAGGAAAACAACCCAACTTGCATCCGGACAAAGGAGGAGATGTAGAATTTGGAATTGATTTCAGAAAC
CCAAGTGGGAAAGGCAAATTCCCACCTGAAGCAAATGGAGGAATTAGCAAAGGCAAAGCCAACGGCCATGGAAACAGCAACGGCCATGGAAATAGCTTCAAATCCTTTGA
AAATGGCGGCGAAATCAAACATAATGATCATCACGAAGTAGATTTCAACTTTAAAGCTGCAGGACATGCTTGA

mRNA sequence

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CTTCTGCTTTGTGGTGGCAAATAGAAATTGCTACTCTAATCCCAATGTTGAACTGCATAATCTTTTTTCTTTATTTTATTTTTTTTCGAAATAAACAATTCAGATTTGAG
ACCCACAATCAATTTGTCTCTTTTGTTCTTATGTCTAAAAAGTAACATCTCCTCCCCTCCAATCACTGTCCGTGTCTCCCTTTTTACTGGTTCCATCACTTAATGGTTAA
ACACCTTAAACTTTGTTTAAGCCAAAAGTTACCGAGGTTCTATAGCATTATGTACAACTTAGTAATCATGATATTAGAAGTTTTTATCTCCTTTCCCTAAATGTTGTTGA
ATAAAAAAAACACGCTAAAATTTTGTTGAGAGCAATAGCTCAATCAGCATAAGTGTGTCAATGACAAAGAGGTTATGAATTCGATCTATTCGCCTCAAATAATTGTTGAA
CTAAAATAAAAATAGTGCCTGATAACATAAGGTTTTTTTTGTTGGTTTAACCTATTTGGAGATTGAAAGATTCGAATTCACGAACTCTTGTTCAAAATACATGTTTTGAT
TAAACGTGTTTTGACACTCTCAACAAAAGGTTAGCTCAAATGTCTCGAGTTCGAGACTCACATGTGACATTACTTTTTTTATGTTTCTAGTGTCTGGCCTAGTGATAGGC
GTGGTTACCCTTGTTTCAGAAGATTAACTCAAATGATGCAAAGTATGGACGTGTAACTTAGTGGTTATAGGTTCAAATCTTAGAAGAAAGAAAAAGGATGGAGAATGACA
CCTCTTCAAAAAAAATCTTTAAATAGTTGTGATTTTGAATGTGCCAAACTCTATCTTTATTCCTTTTATATAAATCTCCATCAATATAATCATAAATCAATCTACCATTT
CTTCCCTTCAACAAAAGAAGAAAAATAAAACACCCCAAGGAATATATTTAGCTCTCTTTTCAAAAAGAAAGTTCCTCCCTTTTTGACCTCTTTCCTTTCTCTTCCCCCAA
ACTCCAATTCTCTTAGAATCACATTCATTTATACAAACATAACCCTCTTCTTGTTGTTGCTTCCTTCATCAGTAAAGTCCTCATCTCTCCCTTCCCTTCTAAAATACCAA
TCCTTCTTCCTTATTTTCTCCTAATCCAATATCCGATACCTTGCCGACATGTCGGAGTTTCAACAACAACAACAACCGCAACAACAACAACTTCAGCCACAGCAGCCAGC
TTTGGTTTATCCGAACACCGCTGCGGCCAGCCAGCCTCCTTCCCACCACCATTCCAGCGGCTCCTTCGGAGGCGTTTTCATAGTTCTCGGCGTCATTGTCGTCATATCAT
CTCTTGCTTGCTTCCTCGGCCGCCTCTGCAACCGGCGAGTCCAAAACCAGAGGCCGAAGCCCGAGAAGACCCACGGCGGCGCTCGGCCTAAAGGAAAACAACCCAACTTG
CATCCGGACAAAGGAGGAGATGTAGAATTTGGAATTGATTTCAGAAACCCAAGTGGGAAAGGCAAATTCCCACCTGAAGCAAATGGAGGAATTAGCAAAGGCAAAGCCAA
CGGCCATGGAAACAGCAACGGCCATGGAAATAGCTTCAAATCCTTTGAAAATGGCGGCGAAATCAAACATAATGATCATCACGAAGTAGATTTCAACTTTAAAGCTGCAG
GACATGCTTGATTTCAACTTCAAGTTATAGCTGTGTGGATTTTTCCTCTTGTTATTTTTTCTTTGTTTGTTCTTCGTTCTTTTCTTTTTTTTGACTTGATCTTTGTTGTT
ATCTAATGAAAAGCTTCAATTTGATCATTAATCTGTGATGATATTCAATGGGTGCTGTTGAATTCATGG

Protein sequence

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MSEFQQQQQPQQQQLQPQQPALVYPNTAAASQPPSHHHSSGSFGGVFIVLGVIVVISSLACFLGRLCNRRVQNQRPKPEKTHGGARPKGKQPNLHPDKGGDVEFGIDFRN
PSGKGKFPPEANGGISKGKANGHGNSNGHGNSFKSFENGGEIKHNDHHEVDFNFKAAGHA

Sed0023819 (gene) of Chayote v1 genome