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Sed0023824 (gene) of Chayote v1 genome

Gene IDSed0023824
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationLG05:44272368..44273297
RNA-Seq ExpressionSed0023824
SyntenySed0023824
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]1.6e-4292.55Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLLLNAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]4.8e-4291.49Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLL NAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.3e-4474.81Show/hide
Query:  SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK
        SN I +P Q +  L L      H     + +++SKLDMGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK
Subjt:  SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK

Query:  SAEEEFGFKHPTGGLTIPCREDVFINITSSL
        +AEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  SAEEEFGFKHPTGGLTIPCREDVFINITSSL

XP_022944372.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.3e-4292.55Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCRE+VFIN+TSSL
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

XP_023512604.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.9e-4474.81Show/hide
Query:  SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK
        SN I +P Q +  L L      H     + E++SKLDMGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK
Subjt:  SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK

Query:  SAEEEFGFKHPTGGLTIPCREDVFINITSSL
        +AEEEFGFKHP GGLTIPCREDVFIN+TS L
Subjt:  SAEEEFGFKHPTGGLTIPCREDVFINITSSL

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein7.9e-4392.55Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLLLNAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

A0A5D3BMR1 Auxin-responsive protein SAUR21-like2.3e-4291.49Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLL NAKQV KM+T SS NQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

A0A6J1FVH4 auxin-responsive protein SAUR21-like6.5e-4574.81Show/hide
Query:  SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK
        SN I +P Q +  L L      H     + +++SKLDMGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK
Subjt:  SNGIQSPTQISKLLDL------HQ----EEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK

Query:  SAEEEFGFKHPTGGLTIPCREDVFINITSSL
        +AEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  SAEEEFGFKHPTGGLTIPCREDVFINITSSL

A0A6J1FVI6 auxin-responsive protein SAUR21-like6.1e-4392.55Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLLLNAKQ+VKM T SS NQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCRE+VFIN+TSSL
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

A0A6J1JGW3 auxin-responsive protein SAUR21-like2.3e-4292.55Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        MGIRLPSLLLNAKQVVKM T  S NQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFIN+TS L
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR222.3e-2358.14Show/hide
Query:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TS L
Subjt:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

Q9FJF9 Auxin-responsive protein SAUR212.3e-2359.3Show/hide
Query:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        LL AK+++   TAS+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TS L
Subjt:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

Q9FJG0 Auxin-responsive protein SAUR203.9e-2359.52Show/hide
Query:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITS
        LL AK+++   T ++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TS
Subjt:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITS

Q9FJG1 Auxin-responsive protein SAUR193.9e-2358.14Show/hide
Query:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        LL AK+++   TA+       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TS L
Subjt:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

Q9FK62 Auxin-responsive protein SAUR241.0e-2360.47Show/hide
Query:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        LL AK   K+ + S+G     PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TS L
Subjt:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family8.7e-2654.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI++ S L
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL

AT4G34800.1 SAUR-like auxin-responsive protein family9.6e-2560Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSS
        M IRL S ++N+KQ       S   Q  VPKGH+AVYVG+    +KRFVVPISYLNHPSF  LL  AEEEFGF HP GGLTIPCRE+ F+ + +S
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGD--IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSS

AT4G34810.1 SAUR-like auxin-responsive protein family1.3e-2451.96Show/hide
Query:  MGIRLPSLLLNAKQVVKMYTASSGNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINIT
        MG+   ++    KQ++K+ + ++ N+        VPKGH+AVYVG   ++E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF+++ 
Subjt:  MGIRLPSLLLNAKQVVKMYTASSGNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINIT

Query:  SS
        +S
Subjt:  SS

AT4G38840.1 SAUR-like auxin-responsive protein family5.1e-2654.17Show/hide
Query:  MGIRLPSLLLNAKQVVK----MYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITS
        M IR+P +L ++KQ+++    + ++SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++FI++ S
Subjt:  MGIRLPSLLLNAKQVVK----MYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITS

AT5G18080.1 SAUR-like auxin-responsive protein family7.4e-2560.47Show/hide
Query:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL
        LL AK   K+ + S+G     PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TS L
Subjt:  LLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINITSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACGTGGATCAAATGGAATTCAATCTCCAACTCAAATTTCAAAACTTCTAGATCTTCATCAAGAAGAAGAAAACATTTCAAAACTAGACATGGGAATCAGATTACC
TTCACTTCTCCTCAATGCCAAACAAGTAGTCAAAATGTATACTGCTTCTTCTGGAAACCAGTGTGGTGTTCCCAAAGGCCATATTGCAGTCTACGTGGGCGATATTGAGA
GAAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCCTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCTTGACA
ATTCCTTGCAGAGAAGATGTTTTCATCAATATCACATCCAGCCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACGTGGATCAAATGGAATTCAATCTCCAACTCAAATTTCAAAACTTCTAGATCTTCATCAAGAAGAAGAAAACATTTCAAAACTAGACATGGGAATCAGATTACC
TTCACTTCTCCTCAATGCCAAACAAGTAGTCAAAATGTATACTGCTTCTTCTGGAAACCAGTGTGGTGTTCCCAAAGGCCATATTGCAGTCTACGTGGGCGATATTGAGA
GAAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCCTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCTTGACA
ATTCCTTGCAGAGAAGATGTTTTCATCAATATCACATCCAGCCTATGAAAGTGAGAAGAAAAAAACTCTATACAAATTTTTGCCAGATTCTCTCCAAATTTTTTCCCCAT
AATTAAGAGTAGCACATTAATGTATAGTTAGTTTCCATATGTAAATGAGGAGTAGCAGAAAAGAGATACATAGAGCTGTAAGCATAAAAATTGAAATAAACAGTCACATT
TTTTGTAAGAACTCTGTGCCCCTTAAATTTTAATTCACAATATCCATTTTCATGATACGTTTTATGACCAACAAGAGCATAGCTGCATGATGTATAACTTTGTAACTGAA
ACATAAGGGTTAAATCCCCA
Protein sequenceShow/hide protein sequence
MSRGSNGIQSPTQISKLLDLHQEEENISKLDMGIRLPSLLLNAKQVVKMYTASSGNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLT
IPCREDVFINITSSL