CuGenDBv2

Gene ID	Sed0023851
Organism	Sechium edule (Chayote v1)
Description	transmembrane protein 234 homolog
Genome location	LG12:29658590..29658973
RNA-Seq Expression	Sed0023851
Synteny	Sed0023851
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR018908 - Putative transmembrane family 234

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0062621.1 transmembrane protein 234-like protein [Cucumis melo var. makuwa]

3.7e-50

87.6

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF
        MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYTLPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVF
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF

Query:  GMLLGEDTRVGYALFGTALIVFGVWLCIT
        G+LLGEDTRVGYALFGTALI FGVWLCI+
Subjt:  GMLLGEDTRVGYALFGTALIVFGVWLCIT

XP_004150555.2 LOW QUALITY PROTEIN: transmembrane protein 234 homolog [Cucumis sativus]

2.4e-49

86.72

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF
        MIGDVEKMVAIGLVWGATN  MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYTLPFFLNLTASATFF ILSHA ISLAVPVTNATTFAA AVF
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF

Query:  GMLLGEDTRVGYALFGTALIVFGVWLCI
        GMLLGE TRVGYALFGT LI FGVWLCI
Subjt:  GMLLGEDTRVGYALFGTALIVFGVWLCI

XP_016902925.1 PREDICTED: transmembrane protein 234 homolog [Cucumis melo]

3.7e-50

87.6

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF
        MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYTLPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVF
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF

Query:  GMLLGEDTRVGYALFGTALIVFGVWLCIT
        G+LLGEDTRVGYALFGTALI FGVWLCI+
Subjt:  GMLLGEDTRVGYALFGTALIVFGVWLCIT

XP_023516356.1 transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]

1.8e-49

85.5

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNA MRRGALLWDQAL+  SN+  SSN   SSLRRWL+LLSIWQYTLPF +NLTASATFFAILS A ISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFGTALIVFGVWLCI
        AVFGMLLGE+TRVGYALFGTALI  GVWLCI
Subjt:  AVFGMLLGEDTRVGYALFGTALIVFGVWLCI

XP_038879672.1 transmembrane protein 234 homolog [Benincasa hispida]

4.8e-50

87.4

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSS-NSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFG
        MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S+S  +   SSLRRWL+LLSIWQYTLPF LNLTASATFFAILS A ISLAVP+TNATTFAATAVFG
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSS-NSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFG

Query:  MLLGEDTRVGYALFGTALIVFGVWLCI
        MLLGEDTRVGYALFGTALI  GVWLCI
Subjt:  MLLGEDTRVGYALFGTALIVFGVWLCI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT65 Uncharacterized protein

2.3e-50

87.5

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF
        MIGDVEKMVAIGLVWGATN  MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYTLPFFLNLTASATFF ILSHA ISLAVPVTNATTFAATAVF
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF

Query:  GMLLGEDTRVGYALFGTALIVFGVWLCI
        GMLLGE TRVGYALFGT LI FGVWLCI
Subjt:  GMLLGEDTRVGYALFGTALIVFGVWLCI

A0A1S4E4M5 transmembrane protein 234 homolog

1.8e-50

87.6

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF
        MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYTLPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVF
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF

Query:  GMLLGEDTRVGYALFGTALIVFGVWLCIT
        G+LLGEDTRVGYALFGTALI FGVWLCI+
Subjt:  GMLLGEDTRVGYALFGTALIVFGVWLCIT

A0A5A7VAD4 Transmembrane protein 234-like protein

1.8e-50

87.6

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF
        MIGDVEKMVAIGLVWGATNA MRRGALLWDQAL+S S+DS+   SSLRRWL+L SIWQYTLPF LNLTASATFFAILS A ISLAVPVTNATTFAATAVF
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSN--SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVF

Query:  GMLLGEDTRVGYALFGTALIVFGVWLCIT
        G+LLGEDTRVGYALFGTALI FGVWLCI+
Subjt:  GMLLGEDTRVGYALFGTALIVFGVWLCIT

A0A6J1HBE7 transmembrane protein 234 homolog

2.0e-49

84.73

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAAT
        MIGDVEKMVAIG+VWGATNA MRRGALLWDQAL+  SN+  SSN   SSLRRWL+LLSIWQYT+PF +NLTASATFFAILS A ISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFGTALIVFGVWLCI
        AVFGMLLGE+TRVGYALFGTALI  GVWLCI
Subjt:  AVFGMLLGEDTRVGYALFGTALIVFGVWLCI

A0A6J1JK46 transmembrane protein 234 homolog

1.7e-48

83.21

Show/hide

Query:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAAT
        MIGDVEKMVAIG+ WGATNA MRRGALLWDQAL+  SN+  SSN   SS RRWL+LLSIWQYT+PF +NLTASATFFAILS A ISLAVPVTNATTFAAT
Subjt:  MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALR--SNSADSSN---SSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAAT

Query:  AVFGMLLGEDTRVGYALFGTALIVFGVWLCI
        AVFGMLLGE+TRVGYALFGTALI  GVWLCI
Subjt:  AVFGMLLGEDTRVGYALFGTALIVFGVWLCI

SwissProt top hits

e value

%identity

Alignment

A0NGI1 Transmembrane protein 234 homolog

5.1e-10

33.6

Show/hide

Query:  VEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLR---LLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGML
        V  ++ + ++WGATN F++RG++ +++      ADS    L  WL    L++ WQY LP  +N   S  +   L    +SL VP+ N+ TF  TA+   L
Subjt:  VEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLR---LLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGML

Query:  LGEDTRVGYALF-GTALIVFGVWLC
        LGE  + G+ ++ G  L++ G  +C
Subjt:  LGEDTRVGYALF-GTALIVFGVWLC

Q54ZG7 Transmembrane protein 234 homolog

2.3e-10

30.65

Show/hide

Query:  DVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLG
        ++  ++ +G +WG TN  ++RG+    +  + N     +  +  ++ L +   YT+P  +NL+ S  FF  LS   ISL VP++N+ TF  T++ GMLLG
Subjt:  DVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLG

Query:  EDTRVGYALFGTALIVFGVWLCIT
        E      +  G   ++ GV +C++
Subjt:  EDTRVGYALFGTALIVFGVWLCIT

Arabidopsis top hits

e value

%identity

Alignment

AT5G19570.1 unknown protein

2.0e-41

61.65

Show/hide

Query:  DVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNS----------SLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFA
        D++KMVA+GLVWGATNA +RRGAL WD+   S++ +S +           +LR W+ LL  WQY++PF +NL+ASATFFA+LSHA ISLAVPVTNATTFA
Subjt:  DVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNS----------SLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFA

Query:  ATAVFGMLLGEDTRVGYALFGTALIVFGVWLCI
        ATA FG+LLGE+T++G AL GT+ IVFG+WLC+
Subjt:  ATAVFGMLLGEDTRVGYALFGTALIVFGVWLCI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCGGAGATGTAGAGAAAATGGTTGCGATCGGTCTGGTCTGGGGCGCCACCAACGCTTTCATGCGCCGTGGTGCACTTCTCTGGGACCAAGCCCTCAGATCCAACTC
TGCCGATTCATCCAACTCCTCCCTTCGTCGATGGCTCAGGCTCCTCTCCATTTGGCAGTACACACTCCCCTTTTTTCTTAACCTCACCGCCTCCGCTACCTTCTTCGCCA
TTCTCAGCCACGCCCGCATCTCGCTCGCCGTTCCGGTCACCAACGCCACCACTTTTGCCGCCACCGCCGTGTTTGGGATGCTTCTCGGCGAAGACACTCGTGTCGGGTAC
GCTCTGTTTGGTACTGCTCTCATTGTTTTCGGCGTGTGGCTTTGCATTACCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MIGDVEKMVAIGLVWGATNAFMRRGALLWDQALRSNSADSSNSSLRRWLRLLSIWQYTLPFFLNLTASATFFAILSHARISLAVPVTNATTFAATAVFGMLLGEDTRVGY
ALFGTALIVFGVWLCIT

Sed0023851 (gene) of Chayote v1 genome