CuGenDBv2

Gene ID	Sed0023853
Organism	Sechium edule (Chayote v1)
Description	LEA_2 domain-containing protein
Genome location	LG01:10598020..10598568
RNA-Seq Expression	Sed0023853
Synteny	Sed0023853
Gene Ontology terms	GO:0098542 - defense response to other organism (biological process) GO:0031224 - intrinsic component of membrane (cellular component)
InterPro domains	IPR044839 - Protein NDR1-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_016899097.1 PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]

1.8e-36

51.83

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S+LP+H  +  + +P A T + H+    AH VK+S TTR+SKL CAIFLS L I+G++TF+L LSL   RP+FFIHDF V G GLDNGF NA I FN TA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIG-----------------FTSVLRGAE---DHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYYD+++ SVYYKD KIG                  T+ L GA    D +++   +  R     ++G VVFRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIG-----------------FTSVLRGAE---DHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRI

XP_022955056.1 NDR1/HIN1-like protein 26 [Cucurbita moschata]

4.5e-35

54.3

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S LP+H     + +P  R    H      H VK+S TTRLSKL CAIFLS L IVG++TF+L LSL   RP+FFIHDF VPGLGL+ GF NA IAFNVTA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYY SIT SVYY+D KIG T +L    +  +          G+       R +E     ++GTV FRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI

XP_022994264.1 NDR1/HIN1-like protein 26 [Cucurbita maxima]

4.5e-35

54.3

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S LP+H     + +P  R    H      H VK+S TTRLSKL CAIFLS L IVG++TF+L LSL   RP+FFIHDF VPGLGL+ GF NA IAFNVTA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYY SIT SVYY+D KIG T +L    +  +          G+       R +E     ++GTV FRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI

XP_023522985.1 NDR1/HIN1-like protein 26, partial [Cucurbita pepo subsp. pepo]

4.5e-35

54.3

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S LP+H     + +P  R    H      H VK+S TTRLSKL CAIFLS L IVG++TF+L LSL   RP+FFIHDF VPGLGL+ GF NA IAFNVTA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYY SIT SVYY+D KIG T +L    +  +          G+       R +E     ++GTV FRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI

XP_038895222.1 NDR1/HIN1-like protein 26 [Benincasa hispida]

2.2e-34

52.97

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Query:  SNLPIHENAKSKPFAR-TANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTAR
        S LP+H    + P  R T + H+    AH VK+S TTR+SKL CAIFLS L I+G++TF+L LSL   RP+FFIHDF V GL LDNGF NA I FNVTAR
Subjt:  SNLPIHENAKSKPFAR-TANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTAR

Query:  NSNLNIGIYYDSITVSVYYKDLKIG-------------FTSVLRGAEDHEEFGGSAQR--RQVEQPARGTVVFRLESTSTIRFRI
        NSNLNIGIYYDS++ SVYYKD K+G              T VL  A   E      QR      + ++G V FRLE +STIRF+I
Subjt:  NSNLNIGIYYDSITVSVYYKDLKIG-------------FTSVLRGAEDHEEFGGSAQR--RQVEQPARGTVVFRLESTSTIRFRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LUA7 LEA_2 domain-containing protein

1.1e-34

51.08

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S+LP+H  +  +  P A T   H+    AH VK+S TTR+SKL CAIFLS L I+G++TF+L LSL   RP+FFIHDF V GL L+NGF +A I FN TA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYYD+++ SVYYK+ KIG T +L    +  +          G+     ++R +E   + ++G VVFRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI

A0A1S4DSX4 NDR1/HIN1-like protein 12

8.9e-37

51.83

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S+LP+H  +  + +P A T + H+    AH VK+S TTR+SKL CAIFLS L I+G++TF+L LSL   RP+FFIHDF V G GLDNGF NA I FN TA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIG-----------------FTSVLRGAE---DHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYYD+++ SVYYKD KIG                  T+ L GA    D +++   +  R     ++G VVFRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIG-----------------FTSVLRGAE---DHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRI

A0A5A7UTL7 NDR1/HIN1-like protein 12

8.9e-37

51.83

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S+LP+H  +  + +P A T + H+    AH VK+S TTR+SKL CAIFLS L I+G++TF+L LSL   RP+FFIHDF V G GLDNGF NA I FN TA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIG-----------------FTSVLRGAE---DHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYYD+++ SVYYKD KIG                  T+ L GA    D +++   +  R     ++G VVFRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIG-----------------FTSVLRGAE---DHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRI

A0A6J1GSN4 NDR1/HIN1-like protein 26

2.2e-35

54.3

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S LP+H     + +P  R    H      H VK+S TTRLSKL CAIFLS L IVG++TF+L LSL   RP+FFIHDF VPGLGL+ GF NA IAFNVTA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYY SIT SVYY+D KIG T +L    +  +          G+       R +E     ++GTV FRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI

A0A6J1K2E7 NDR1/HIN1-like protein 26

2.2e-35

54.3

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Query:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA
        S LP+H     + +P  R    H      H VK+S TTRLSKL CAIFLS L IVG++TF+L LSL   RP+FFIHDF VPGLGL+ GF NA IAFNVTA
Subjt:  SNLPIH--ENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTA

Query:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI
        RNSNLNIGIYY SIT SVYY+D KIG T +L    +  +          G+       R +E     ++GTV FRLE TSTIRFRI
Subjt:  RNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHEE--------FGGSA----QRRQVE---QPARGTVVFRLESTSTIRFRI

SwissProt top hits

e value

%identity

Alignment

O48915 Protein NDR1

7.3e-04

42.25

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Query:  CAIFLSFLFIVGLVTFVLCLSLR---PQFFIHDFLVPGLGLD-NGFHNAHIAFNVTARNSNLNIGIYYDSI
        C   LSF+F  GL +  L LSLR   P+  I +F +P LG D N   N  + F V   N N + GIYYD +
Subjt:  CAIFLSFLFIVGLVTFVLCLSLR---PQFFIHDFLVPGLGLD-NGFHNAHIAFNVTARNSNLNIGIYYDSI

Q9SRN1 NDR1/HIN1-like protein 2

4.3e-04

31.63

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Query:  LKCAIFLSFLFIVGLVTFVLCLSLRP---QFFIHDFLVPGLGLD--NGFHNAHIAFNVTARNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHE
        L C I ++   I+G+   +L L  RP   +F++ D  +     D  N  H + +  N T RN N  +G+YYD  +VS YY D + G  +V    + H+
Subjt:  LKCAIFLSFLFIVGLVTFVLCLSLRP---QFFIHDFLVPGLGLD--NGFHNAHIAFNVTARNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHE

Arabidopsis top hits

e value

%identity

Alignment

AT1G61760.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

1.1e-26

38.8

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Query:  NLPIHENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTARNS
        +LP+  N  ++P +R    H+ +   H VK+S TTR+SKL CAIFLS L  +G++TF+L +SL   RP+  I  F + GL   +GF  +HI+F +TA N 
Subjt:  NLPIHENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTARNS

Query:  NLNIGIYYDSITVSVYYKDLKIGFTSV----LRGAEDHEEFGGSAQR--------RQVEQPA---RGTVVFRLESTSTIRFRI
        N N+GIYYDS+  SVYYK+ +IG T +     +  ++     G+  R        R +E      +G ++FRL+  S IRF++
Subjt:  NLNIGIYYDSITVSVYYKDLKIGFTSV----LRGAEDHEEFGGSAQR--------RQVEQPA---RGTVVFRLESTSTIRFRI

AT3G11650.1 NDR1/HIN1-like 2

3.0e-05

31.63

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Query:  LKCAIFLSFLFIVGLVTFVLCLSLRP---QFFIHDFLVPGLGLD--NGFHNAHIAFNVTARNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHE
        L C I ++   I+G+   +L L  RP   +F++ D  +     D  N  H + +  N T RN N  +G+YYD  +VS YY D + G  +V    + H+
Subjt:  LKCAIFLSFLFIVGLVTFVLCLSLRP---QFFIHDFLVPGLGLD--NGFHNAHIAFNVTARNSNLNIGIYYDSITVSVYYKDLKIGFTSVLRGAEDHE

AT3G20600.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

5.2e-05

42.25

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Query:  CAIFLSFLFIVGLVTFVLCLSLR---PQFFIHDFLVPGLGLD-NGFHNAHIAFNVTARNSNLNIGIYYDSI
        C   LSF+F  GL +  L LSLR   P+  I +F +P LG D N   N  + F V   N N + GIYYD +
Subjt:  CAIFLSFLFIVGLVTFVLCLSLR---PQFFIHDFLVPGLGLD-NGFHNAHIAFNVTARNSNLNIGIYYDSI

AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

2.9e-24

39.43

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Query:  KSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTARNSNLNIGIYY
        +++P  R    H+ +  AH V++S +TR+SK  CA+FL  LF VG++ F+L LSL   RP+F I DF+V GL    G  NA IAFNVT  N N ++G+Y+
Subjt:  KSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSL---RPQFFIHDFLVPGLGLDNGFHNAHIAFNVTARNSNLNIGIYY

Query:  DSITVSVYYKDLKIGF-------------TSVLRGAEDHEEFGGSAQR--RQVEQPARGTVVFRLESTSTIRFRI
        DS+  S+YYKD ++G              T+++ G         ++ R        A+GTV FRL+  STIRF++
Subjt:  DSITVSVYYKDLKIGF-------------TSVLRGAEDHEEFGGSAQR--RQVEQPARGTVVFRLESTSTIRFRI

Sequences

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CDS sequence

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ATGGACTCCAATCTTCCCATCCACGAAAATGCAAAGTCCAAGCCATTTGCCCGTACAGCAAACCAACACGCCCGAACAACGCCCGCTCACCTCGTCAAGGACAGCTTCAC
CACGCGCTTGTCCAAGCTCAAATGTGCCATTTTCTTGAGCTTCTTGTTCATTGTGGGCCTCGTTACATTTGTACTCTGCCTCAGTTTAAGGCCCCAATTTTTTATCCACG
ACTTTTTGGTTCCGGGTTTGGGCTTGGATAACGGGTTTCATAATGCCCATATTGCCTTTAACGTCACGGCTCGAAATTCAAATCTCAACATTGGAATCTACTACGACTCG
ATAACCGTTTCGGTTTATTATAAGGACTTGAAAATTGGGTTCACGTCCGTATTACGAGGGGCCGAAGACCACGAGGAGTTTGGCGGCAGTGCTCAGCGGCGCCAAGTTGA
ACAACCGGCTAGGGGGACCGTGGTTTTTCGGTTGGAGAGTACATCGACCATCCGGTTCAGGATACCCATGGGATAG

mRNA sequence

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Protein sequence

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MDSNLPIHENAKSKPFARTANQHARTTPAHLVKDSFTTRLSKLKCAIFLSFLFIVGLVTFVLCLSLRPQFFIHDFLVPGLGLDNGFHNAHIAFNVTARNSNLNIGIYYDS
ITVSVYYKDLKIGFTSVLRGAEDHEEFGGSAQRRQVEQPARGTVVFRLESTSTIRFRIPMG

Sed0023853 (gene) of Chayote v1 genome