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Sed0023854 (gene) of Chayote v1 genome

Gene IDSed0023854
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:43263397..43263909
RNA-Seq ExpressionSed0023854
SyntenySed0023854
Gene Ontology termsNA
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573960.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2164Show/hide
Query:  CTTRIPKSSSFAIFILLLWASQIWV--C-----NSSIF---PPPPPPPHTA-LTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN
        CT RI  SSSFAI IL+LW SQIWV  C      S IF   PPPPPPPHT   T  A+ RY LL KYFKDRA  D  R H+ GF D KRKIPSCPDPLHN
Subjt:  CTTRIPKSSSFAIFILLLWASQIWV--C-----NSSIF---PPPPPPPHTA-LTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN

KAG6601288.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1655.66Show/hide
Query:  CTTRI--PKSSSFAIFILLLWASQIWVCN------SSIFPPPPPPPHTALT---------AAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSC
        CT RI    SSSFA+ I +LW SQIWVC+      S IF  PPPPPHTA T         A A+    LL KYFK +A FDR R  D+GF D KR+IPSC
Subjt:  CTTRI--PKSSSFAIFILLLWASQIWVCN------SSIFPPPPPPPHTALT---------AAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSC

Query:  PDPLHN
        PDPLHN
Subjt:  PDPLHN

KAG7015490.1 hypothetical protein SDJN02_23126, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-1259.3Show/hide
Query:  CTTRIPKSSSFAIFILLLWASQIWV--C-----NSSIFPPPPPPP---HTA-LTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGD
        CT RI  SSSFAI IL+LW SQIWV  C      S IFPPPPPPP   HT   T  A+ RY LL KYFKDRA  D  R H+ GF D
Subjt:  CTTRIPKSSSFAIFILLLWASQIWV--C-----NSSIFPPPPPPP---HTA-LTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGD

KAG7032076.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1655.66Show/hide
Query:  CTTRI--PKSSSFAIFILLLWASQIWVCN------SSIFPPPPPPPHTALT---------AAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSC
        CT RI    SSSFA+ I +LW SQIWVC+      S IF  PPPPPHTA T         A A+    LL KYFK +A FDR R  D+GF D KR+IPSC
Subjt:  CTTRI--PKSSSFAIFILLLWASQIWVCN------SSIFPPPPPPPHTALT---------AAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSC

Query:  PDPLHN
        PDPLHN
Subjt:  PDPLHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]1.5e-1653.85Show/hide
Query:  MTCTTRIPKSSSFAIFILLLWASQIWVC------NSSIF--PPPPPPPHTALTAAA-----HGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPD
        +T ++    +S+FAI IL+LW SQIWVC       S IF  PPPPPPPH A  + +     + +  LL KYF  RA FDR R HD+GF D KRKIPSCPD
Subjt:  MTCTTRIPKSSSFAIFILLLWASQIWVC------NSSIF--PPPPPPPHTALTAAA-----HGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPD

Query:  PLHN
        PLHN
Subjt:  PLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KR66 Uncharacterized protein7.1e-1753.85Show/hide
Query:  MTCTTRIPKSSSFAIFILLLWASQIWVC------NSSIF--PPPPPPPHTALTAAA-----HGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPD
        +T ++    +S+FAI IL+LW SQIWVC       S IF  PPPPPPPH A  + +     + +  LL KYF  RA FDR R HD+GF D KRKIPSCPD
Subjt:  MTCTTRIPKSSSFAIFILLLWASQIWVC------NSSIF--PPPPPPPHTALTAAA-----HGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPD

Query:  PLHN
        PLHN
Subjt:  PLHN

A0A2J6LV71 Uncharacterized protein5.3e-0440Show/hide
Query:  IFILLLW----ASQIWVCNS------SIFPPPPPPPHTALTAAAHGRYALLHKYFKDRAVFDRRRDH---DKGFGDGKRKIPSCPDPLHN
        +++LLL+      QIW+ +S      S  PPPPPPP    + A   + + LH+ F     F+ R  H   DK F + KR +PSCPDPLHN
Subjt:  IFILLLW----ASQIWVCNS------SIFPPPPPPPHTALTAAAHGRYALLHKYFKDRAVFDRRRDH---DKGFGDGKRKIPSCPDPLHN

A0A4S4DK43 Uncharacterized protein1.9e-0648.28Show/hide
Query:  PPPPPPPHTALTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN
        PPPPPPP   +  A   +  L  KYF  RA          GF D KR++PSCPDPLHN
Subjt:  PPPPPPPHTALTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN

A0A6A4NZP3 Uncharacterized protein5.3e-0457.89Show/hide
Query:  LLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN
        LLHKYF     FD      KGF + KR++PSCPDPLHN
Subjt:  LLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN

A0A6J1DAV9 uncharacterized protein LOC1110186338.7e-0743.43Show/hide
Query:  CTTRI----PKSSSFAIFILLLWASQIWVC------NSSIFPPPPPPPHTALTA----AAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPD
        CT RI      +SSFAI IL+LW SQIWVC       S I PPP       LT      A G+  L+ KY + RA      D  +GF D KR++PSC D
Subjt:  CTTRI----PKSSSFAIFILLLWASQIWVC------NSSIFPPPPPPPHTALTA----AAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTGTACTACACGAATCCCCAAATCCTCTTCATTTGCCATCTTCATTTTGCTCCTCTGGGCCTCTCAGATTTGGGTTTGTAATTCAAGCATTTTCCCACCCCCGCC
GCCGCCGCCGCACACGGCACTCACCGCCGCCGCACACGGCAGATATGCACTTCTTCATAAATATTTTAAGGACAGAGCCGTTTTCGATCGCCGCCGCGACCACGATAAAG
GGTTTGGAGATGGCAAACGGAAAATACCCAGTTGTCCAGATCCTCTTCACAATTAG
mRNA sequenceShow/hide mRNA sequence
AAATCATCCATCTCTTCAACAAAAAAAAACCAAAACCCATTTCATCTCTACATGTGAGGAATTAATTTCAAGCCTCTAATTCAAAATCCATTTTCATTCTCTCTTCCATG
ACGTGTACTACACGAATCCCCAAATCCTCTTCATTTGCCATCTTCATTTTGCTCCTCTGGGCCTCTCAGATTTGGGTTTGTAATTCAAGCATTTTCCCACCCCCGCCGCC
GCCGCCGCACACGGCACTCACCGCCGCCGCACACGGCAGATATGCACTTCTTCATAAATATTTTAAGGACAGAGCCGTTTTCGATCGCCGCCGCGACCACGATAAAGGGT
TTGGAGATGGCAAACGGAAAATACCCAGTTGTCCAGATCCTCTTCACAATTAGTAGGATTACTTACTTACAATTCTTTTCTTTTCTTTTTTTCTTGTCATTATAACTTTT
CTTTTCCCATAATACCCCCGGTTTTCTCTTTAGTTTTTGCTCGCTTTTCCGCGATTCCACGGAGAAAACCGGG
Protein sequenceShow/hide protein sequence
MTCTTRIPKSSSFAIFILLLWASQIWVCNSSIFPPPPPPPHTALTAAAHGRYALLHKYFKDRAVFDRRRDHDKGFGDGKRKIPSCPDPLHN