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Sed0023856 (gene) of Chayote v1 genome

Gene IDSed0023856
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG01:1859714..1859887
RNA-Seq ExpressionSed0023856
SyntenySed0023856
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146170.1 auxin-responsive protein SAUR21-like [Momordica charantia]5.0e-2392.98Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.1e-2291.23Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRF+VPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.5e-2291.23Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

XP_023007089.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]8.6e-2392.98Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]1.5e-2291.23Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEE+FGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like2.4e-2392.98Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like7.1e-2391.23Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEE+FGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like5.4e-2391.23Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRF+VPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.1e-2391.23Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEE+FGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

A0A6J1L403 auxin-responsive protein SAUR21-like4.1e-2392.98Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        +QRKRFVVPISYLNHPSFQ LL HAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR235.6e-1769.81Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRL
        Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRL
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRL

Q9FJF7 Auxin-responsive protein SAUR223.3e-1768.52Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR215.6e-1768.52Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.5e-1770.37Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.1e-1770.37Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.6e-1968.42Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS
        MQ++RFVVP++YL+HP FQ LL+ AEEEFGF HP GGLTIPC E  F+DL SRL  S
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS

AT4G34810.1 SAUR-like auxin-responsive protein family3.6e-1973.21Show/hide
Query:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDL-TSRLQ
        M++KRFVVPIS+LNHPSF+  L  AEEEFGF+HP GGLTIPC+E+ FLDL  SRLQ
Subjt:  MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDL-TSRLQ

AT5G18020.1 SAUR-like auxin-responsive protein family1.8e-1870.37Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family2.3e-1868.52Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family8.0e-1970.37Show/hide
Query:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ
        Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  QRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGAAACGGTTTGTGGTGCCGATATCGTACTTGAATCATCCTTCGTTCCAACCGCTCCTCAAACATGCTGAGGAAGAGTTTGGATTCCATCATCCTCAAGGTGG
TCTAACTATTCCTTGTAAAGAGGATGCCTTTCTTGATCTCACTTCTAGATTGCAAGTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGGAAACGGTTTGTGGTGCCGATATCGTACTTGAATCATCCTTCGTTCCAACCGCTCCTCAAACATGCTGAGGAAGAGTTTGGATTCCATCATCCTCAAGGTGG
TCTAACTATTCCTTGTAAAGAGGATGCCTTTCTTGATCTCACTTCTAGATTGCAAGTCTCTTAA
Protein sequenceShow/hide protein sequence
MQRKRFVVPISYLNHPSFQPLLKHAEEEFGFHHPQGGLTIPCKEDAFLDLTSRLQVS