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Sed0023899 (gene) of Chayote v1 genome

Gene IDSed0023899
OrganismSechium edule (Chayote v1)
Descriptionprotein CURVATURE THYLAKOID 1B, chloroplastic-like
Genome locationLG13:6746193..6749500
RNA-Seq ExpressionSed0023899
SyntenySed0023899
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsIPR025564 - Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain
IPR033344 - Protein CURVATURE THYLAKOID 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600663.1 Protein CURVATURE THYLAKOID 1D, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.0e-8470.48Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N  LRP  ALPL+  + SR AR + FRYRHF++SLPRAAASD+S GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS
         SSV  E+LPAE LSSDEIV PEVP+EEPV DAPVV VEDS SASS TV DS SAE VA NE +T     EEPKE PVE AQE   + L DLKLESVDK 
Subjt:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS

Query:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        SLALYGGGA FGLWLVSA+VGAVDSIPLVPKLLE+VGLGYT+WF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

XP_022943255.1 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X1 [Cucurbita moschata]8.0e-8468.09Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N HLRP  ALPL+  + SR AR + FRYRHF++SLPRAAAS++S GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  -----------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVL
                    SSV  E+LPAE LSSDEIV PEVP+EEPV DAPVV VEDS SASS TV DSSSAE VA NE +T     EEPKE PVE AQE   + L
Subjt:  -----------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVL

Query:  KDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
         DLKLESVDK SLALYGGGA FGLWLVSA+VGAVDSIPLVPKLLE+VGLGYT+WF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  KDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

XP_022943256.1 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X2 [Cucurbita moschata]4.2e-8570.85Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N HLRP  ALPL+  + SR AR + FRYRHF++SLPRAAAS++S GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS
         SSV  E+LPAE LSSDEIV PEVP+EEPV DAPVV VEDS SASS TV DSSSAE VA NE +T     EEPKE PVE AQE   + L DLKLESVDK 
Subjt:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS

Query:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        SLALYGGGA FGLWLVSA+VGAVDSIPLVPKLLE+VGLGYT+WF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

XP_022990797.1 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X3 [Cucurbita maxima]6.1e-8470.11Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N  LRP  ALPL+  + SR  R + FRYRHF++SLPRAAASDDS GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVESAQELAFEVLKDLKLESVDKS
         SSV  E+LP+E LSSDEIV PEVP+EEPV DAPVV VEDS SASS +V DSSSAE VA NE +T     EEPKE PVE AQE   + L DLKLESVDK 
Subjt:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVESAQELAFEVLKDLKLESVDKS

Query:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        SLALYGGGAFFGLWLVS +VGA DSIPLVPKLLE+VGLGYTVWF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

XP_023552927.1 protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-8370.48Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N  LRP  ALPL+  + SR AR + FRYRHF+ SLPRAAASDDS GSS  ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS
         SSV  E+LPAE LSSDEIV PEVP+EEPV DAPVV VEDS SASS TV DSSSAE VA  E +T     EEPKE PVE AQE   + L DLKLESVDK 
Subjt:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS

Query:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        SLALYGGGA FGLWLVSA+VGAVDSIPLVPKLLE+VGLGYT+WF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

TrEMBL top hitse value%identityAlignment
A0A6J1FR86 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X22.1e-8570.85Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N HLRP  ALPL+  + SR AR + FRYRHF++SLPRAAAS++S GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS
         SSV  E+LPAE LSSDEIV PEVP+EEPV DAPVV VEDS SASS TV DSSSAE VA NE +T     EEPKE PVE AQE   + L DLKLESVDK 
Subjt:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVLKDLKLESVDKS

Query:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        SLALYGGGA FGLWLVSA+VGAVDSIPLVPKLLE+VGLGYT+WF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

A0A6J1FXL3 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X13.9e-8468.09Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N HLRP  ALPL+  + SR AR + FRYRHF++SLPRAAAS++S GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  -----------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVL
                    SSV  E+LPAE LSSDEIV PEVP+EEPV DAPVV VEDS SASS TV DSSSAE VA NE +T     EEPKE PVE AQE   + L
Subjt:  -----------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTV----EEPKEAPVESAQELAFEVL

Query:  KDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
         DLKLESVDK SLALYGGGA FGLWLVSA+VGAVDSIPLVPKLLE+VGLGYT+WF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  KDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

A0A6J1JJV3 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X33.0e-8470.11Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N  LRP  ALPL+  + SR  R + FRYRHF++SLPRAAASDDS GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVESAQELAFEVLKDLKLESVDKS
         SSV  E+LP+E LSSDEIV PEVP+EEPV DAPVV VEDS SASS +V DSSSAE VA NE +T     EEPKE PVE AQE   + L DLKLESVDK 
Subjt:  VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVESAQELAFEVLKDLKLESVDKS

Query:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        SLALYGGGAFFGLWLVS +VGA DSIPLVPKLLE+VGLGYTVWF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

A0A6J1JNY2 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X25.6e-8367.38Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N  LRP  ALPL+  + SR  R + FRYRHF++SLPRAAASDDS GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  -----------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVESAQELAFEVL
                    SSV  E+LP+E LSSDEIV PEVP+EEPV DAPVV VEDS SASS +V DSSSAE VA NE +T     EEPKE PVE AQE   + L
Subjt:  -----------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVESAQELAFEVL

Query:  KDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
         DLKLESVDK SLALYGGGAFFGLWLVS +VGA DSIPLVPKLLE+VGLGYTVWF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  KDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

A0A6J1JR19 protein CURVATURE THYLAKOID 1A, chloroplastic-like isoform X18.1e-8265.07Show/hide
Query:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------
        MAMELCA R IS+LPV S  LA N  LRP  ALPL+  + SR  R + FRYRHF++SLPRAAASDDS GSSP ITEERD   V E+SS A+         
Subjt:  MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAA---------

Query:  ---------------------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVE
                              SSV  E+LP+E LSSDEIV PEVP+EEPV DAPVV VEDS SASS +V DSSSAE VA NE +T     EEPKE PVE
Subjt:  ---------------------VSSVIVEDLPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTT----VEEPKEAPVE

Query:  SAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
         AQE   + L DLKLESVDK SLALYGGGAFFGLWLVS +VGA DSIPLVPKLLE+VGLGYTVWF ARFLLFKESR+ELAAK DE+KEQVIG
Subjt:  SAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

SwissProt top hitse value%identityAlignment
O04616 Protein CURVATURE THYLAKOID 1A, chloroplastic1.3e-1537.5Show/hide
Query:  SSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTVE--EPKEAPVESAQELAFEVLKDLKLE---SVDKSSLALYGGGAFFGL
        SS  +++P VP       A       S   SS TV      + V+ N +  VE  + + +  E++     E++ DLK +     +KS++ +YGGGA   +
Subjt:  SSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTVE--EPKEAPVESAQELAFEVLKDLKLE---SVDKSSLALYGGGAFFGL

Query:  WLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGSD
        WL S +VGA++S+PL+PK++E+VGLGYT WF  R+LLFK SR+ELA   + +K+++ GS+
Subjt:  WLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGSD

Q8LCA1 Protein CURVATURE THYLAKOID 1B, chloroplastic6.3e-0729.28Show/hide
Query:  SSSAAVSSVIVED-LPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVT-TVEEPKEAPVESAQELAFEVLKDLKL---
        S S + SS I++   P  +L+S     P        +  P + ++  + A+  T    +   K+  N VT    E  EAP  + +    E+ + +K    
Subjt:  SSSAAVSSVIVED-LPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVT-TVEEPKEAPVESAQELAFEVLKDLKL---

Query:  --ESV-DKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGS
          E V DK ++          LW  + ++ A+D +PLVP +LE+VG+GYT WFT + L+FK  RE L  K     + ++GS
Subjt:  --ESV-DKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGS

Q8LDD3 Protein CURVATURE THYLAKOID 1D, chloroplastic1.1e-2247.01Show/hide
Query:  VTVEDSSSASSDTVDDSSSAEKVANNEVTTVEEPKEAPVESAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLG
        VT E S+  +   V+D       A  + +  E P+    E  +  A E L D+KL+S    S+ LYG GA   L+L SAIV ++++IPL PKL+EVVGLG
Subjt:  VTVEDSSSASSDTVDDSSSAEKVANNEVTTVEEPKEAPVESAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLG

Query:  YTVWFTARFLLFKESREELAAKFDEVKEQVIGSD
        YT+WFT R+LLFK +REEL  K  E+K+QV+GSD
Subjt:  YTVWFTARFLLFKESREELAAKFDEVKEQVIGSD

Q9M812 Protein CURVATURE THYLAKOID 1C, chloroplastic3.5e-0531.17Show/hide
Query:  ESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WFT R+LLFK  R+EL+    +    ++G
Subjt:  ESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

Arabidopsis top hitse value%identityAlignment
AT1G52220.1 FUNCTIONS IN: molecular_function unknown2.5e-0631.17Show/hide
Query:  ESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG
        +S D+  L   G      LW    ++ A+D +P++    E+VG+ ++ WFT R+LLFK  R+EL+    +    ++G
Subjt:  ESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIG

AT2G46820.1 photosystem I P subunit4.5e-0829.28Show/hide
Query:  SSSAAVSSVIVED-LPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVT-TVEEPKEAPVESAQELAFEVLKDLKL---
        S S + SS I++   P  +L+S     P        +  P + ++  + A+  T    +   K+  N VT    E  EAP  + +    E+ + +K    
Subjt:  SSSAAVSSVIVED-LPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVT-TVEEPKEAPVESAQELAFEVLKDLKL---

Query:  --ESV-DKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGS
          E V DK ++          LW  + ++ A+D +PLVP +LE+VG+GYT WFT + L+FK  RE L  K     + ++GS
Subjt:  --ESV-DKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGS

AT2G46820.2 photosystem I P subunit4.5e-0829.28Show/hide
Query:  SSSAAVSSVIVED-LPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVT-TVEEPKEAPVESAQELAFEVLKDLKL---
        S S + SS I++   P  +L+S     P        +  P + ++  + A+  T    +   K+  N VT    E  EAP  + +    E+ + +K    
Subjt:  SSSAAVSSVIVED-LPAEKLSSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVT-TVEEPKEAPVESAQELAFEVLKDLKL---

Query:  --ESV-DKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGS
          E V DK ++          LW  + ++ A+D +PLVP +LE+VG+GYT WFT + L+FK  RE L  K     + ++GS
Subjt:  --ESV-DKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGS

AT4G01150.1 unknown protein9.0e-1737.5Show/hide
Query:  SSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTVE--EPKEAPVESAQELAFEVLKDLKLE---SVDKSSLALYGGGAFFGL
        SS  +++P VP       A       S   SS TV      + V+ N +  VE  + + +  E++     E++ DLK +     +KS++ +YGGGA   +
Subjt:  SSDEIVMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTVE--EPKEAPVESAQELAFEVLKDLKLE---SVDKSSLALYGGGAFFGL

Query:  WLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGSD
        WL S +VGA++S+PL+PK++E+VGLGYT WF  R+LLFK SR+ELA   + +K+++ GS+
Subjt:  WLVSAIVGAVDSIPLVPKLLEVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGSD

AT4G38100.1 unknown protein7.6e-2447.01Show/hide
Query:  VTVEDSSSASSDTVDDSSSAEKVANNEVTTVEEPKEAPVESAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLG
        VT E S+  +   V+D       A  + +  E P+    E  +  A E L D+KL+S    S+ LYG GA   L+L SAIV ++++IPL PKL+EVVGLG
Subjt:  VTVEDSSSASSDTVDDSSSAEKVANNEVTTVEEPKEAPVESAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLLEVVGLG

Query:  YTVWFTARFLLFKESREELAAKFDEVKEQVIGSD
        YT+WFT R+LLFK +REEL  K  E+K+QV+GSD
Subjt:  YTVWFTARFLLFKESREELAAKFDEVKEQVIGSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGAGCTCTGTGCATCGCGAGCCATCTCTAACCTCCCCGTTTTCTCCACTGCTCTCGCCGGAAACCCGCATCTCCGGCCAAACCTCGCTCTTCCTCTCAGAAG
AACCCTACCTTCGCGCTCTGCTCGCAGCCTCCGATTCCGATATCGTCATTTTGCTATTTCGCTACCGAGAGCAGCGGCTTCTGATGATTCAAATGGATCTAGTCCTTTGA
TTACTGAAGAACGTGATATCGTTACAGTATTGGAAAATTCTTCTTCTGCTGCTGTTTCTTCAGTCATCGTGGAAGATTTGCCTGCGGAGAAGCTTTCATCGGACGAAATT
GTGATGCCTGAAGTACCTGAAGAAGAACCGGTTGTGGACGCTCCTGTGGTAACTGTGGAGGATTCTTCTTCTGCATCTTCCGATACCGTGGATGATTCTTCTTCTGCTGA
GAAGGTAGCGAACAACGAAGTCACCACGGTTGAAGAACCTAAAGAAGCACCAGTTGAGAGTGCACAAGAACTGGCGTTTGAAGTATTGAAGGATCTTAAACTGGAGTCTG
TTGATAAATCCAGTCTTGCCCTATATGGAGGTGGTGCTTTTTTTGGCCTTTGGTTGGTTTCAGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGCTGTTG
GAAGTTGTGGGGCTTGGTTATACAGTGTGGTTCACGGCTCGCTTTTTGTTATTCAAGGAAAGTAGAGAGGAATTGGCTGCCAAGTTCGATGAGGTAAAGGAACAGGTTAT
TGGTTCAGATTGA
mRNA sequenceShow/hide mRNA sequence
AACCCTTTTTCTTCCAATGAATAAGAAACACTCAATTCCACCATAAACCCCCCATTTCATCTTCTTCCATTTCCACCACCACCGATTCCCCTCTCCGGCCATGGCGATGG
AGCTCTGTGCATCGCGAGCCATCTCTAACCTCCCCGTTTTCTCCACTGCTCTCGCCGGAAACCCGCATCTCCGGCCAAACCTCGCTCTTCCTCTCAGAAGAACCCTACCT
TCGCGCTCTGCTCGCAGCCTCCGATTCCGATATCGTCATTTTGCTATTTCGCTACCGAGAGCAGCGGCTTCTGATGATTCAAATGGATCTAGTCCTTTGATTACTGAAGA
ACGTGATATCGTTACAGTATTGGAAAATTCTTCTTCTGCTGCTGTTTCTTCAGTCATCGTGGAAGATTTGCCTGCGGAGAAGCTTTCATCGGACGAAATTGTGATGCCTG
AAGTACCTGAAGAAGAACCGGTTGTGGACGCTCCTGTGGTAACTGTGGAGGATTCTTCTTCTGCATCTTCCGATACCGTGGATGATTCTTCTTCTGCTGAGAAGGTAGCG
AACAACGAAGTCACCACGGTTGAAGAACCTAAAGAAGCACCAGTTGAGAGTGCACAAGAACTGGCGTTTGAAGTATTGAAGGATCTTAAACTGGAGTCTGTTGATAAATC
CAGTCTTGCCCTATATGGAGGTGGTGCTTTTTTTGGCCTTTGGTTGGTTTCAGCCATTGTTGGTGCTGTTGATTCCATCCCATTGGTTCCCAAGCTGTTGGAAGTTGTGG
GGCTTGGTTATACAGTGTGGTTCACGGCTCGCTTTTTGTTATTCAAGGAAAGTAGAGAGGAATTGGCTGCCAAGTTCGATGAGGTAAAGGAACAGGTTATTGGTTCAGAT
TGACGACTGATTTGGTCGCAAGTTTTCTGCTGTTACATTTAGATAGTCTTTGAATAGATAGCTGGATGTGCTGATGAACATATATGTTATAGATAATTACATTTCCTTTC
TAATGGAGCACATATTACATCATAGAACAAGGGATTACGCTTGAATTTCTTTGATTGGAATTAGAATAAGCATAAGAGAATATATATATAAATATATATATTATTCTGAT
CGAAT
Protein sequenceShow/hide protein sequence
MAMELCASRAISNLPVFSTALAGNPHLRPNLALPLRRTLPSRSARSLRFRYRHFAISLPRAAASDDSNGSSPLITEERDIVTVLENSSSAAVSSVIVEDLPAEKLSSDEI
VMPEVPEEEPVVDAPVVTVEDSSSASSDTVDDSSSAEKVANNEVTTVEEPKEAPVESAQELAFEVLKDLKLESVDKSSLALYGGGAFFGLWLVSAIVGAVDSIPLVPKLL
EVVGLGYTVWFTARFLLFKESREELAAKFDEVKEQVIGSD