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Sed0023922 (gene) of Chayote v1 genome

Gene IDSed0023922
OrganismSechium edule (Chayote v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationLG08:28970185..28971577
RNA-Seq ExpressionSed0023922
SyntenySed0023922
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]9.3e-2785.29Show/hide
Query:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        ++GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN AP NTA KNN S P++N+QYSPMKKWFCCF
Subjt:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

KAG6588926.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2478.26Show/hide
Query:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCC
        + +KGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSN A  N A KNN   P++N+QYSPMKKWFCC
Subjt:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCC

KGN58221.1 hypothetical protein Csa_017629 [Cucumis sativus]8.4e-2885.92Show/hide
Query:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        MAS+KGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN AP NTA K+NTS  ++N+QYSPMKKWFCCF
Subjt:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]3.2e-2786.76Show/hide
Query:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        +KGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN AP NT  KNNTS P++N+QYSPMKKWFCCF
Subjt:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]3.2e-2786.76Show/hide
Query:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        +KGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN AP NT  KNNTS P++N+QYSPMKKWFCCF
Subjt:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein4.1e-2885.92Show/hide
Query:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        MAS+KGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN AP NTA K+NTS  ++N+QYSPMKKWFCCF
Subjt:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

A0A2P5B5J0 RIN4, pathogenic type III effector avirulence factor Avr cleavage site9.1e-2068.42Show/hide
Query:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVA----PVNTAPKNNTSN--PQDNHQYSPMKKWFCCF
        + +KGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A      N    NN++N  P + + Y PMKKWFCCF
Subjt:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVA----PVNTAPKNNTSN--PQDNHQYSPMKKWFCCF

A0A2P5FBR6 RIN4, pathogenic type III effector avirulence factor Avr cleavage site4.1e-2069.74Show/hide
Query:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVA----PVNTAPKNNTSN--PQDNHQYSPMKKWFCCF
        + EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A      N    NN++N  P + + Y PMKKWFCCF
Subjt:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVA----PVNTAPKNNTSN--PQDNHQYSPMKKWFCCF

A0A314URN2 AvrRpt-cleavage domain-containing protein1.6e-1971.43Show/hide
Query:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCC
        MAS+ GRPLPKFGEWDVNNPASAEGFTVIF+KARD+K SN AP    P   +S P+ N QY P KKWFCC
Subjt:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCC

A0A5D3E371 RPM1-interacting protein 4-like1.1e-2080.95Show/hide
Query:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPM
        + +KGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN AP NTA K+NTS  ++N+QYSPM
Subjt:  ASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPM

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.1e-1459.15Show/hide
Query:  SEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNN---TSNPQDNHQYSPMKKWFCC
        S+KGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   P +    +     S   D  +  P KKW CC
Subjt:  SEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNN---TSNPQDNHQYSPMKKWFCC

Q8GYN5 RPM1-interacting protein 41.1e-0641.43Show/hide
Query:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKS--NVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        EK   +PKFG+WD NNP+SA+G+T IF+K R+E+ S  NV+  +  P + +S   +N          CCF
Subjt:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKS--NVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein7.9e-1655.88Show/hide
Query:  SEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCC
        ++KGRPLPKFGEWDVN+P+SAEGFTVIF+KAR+EKK      +        N        P KKWFCC
Subjt:  SEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCC

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein2.1e-1657.35Show/hide
Query:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF
        ++ RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N +    + + + +  QD     P KK FCCF
Subjt:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein5.7e-1458.21Show/hide
Query:  SEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNN---TSNPQDNHQYSPMKK
        S+KGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   P +    +     S   D  +  P+KK
Subjt:  SEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNN---TSNPQDNHQYSPMKK

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.3e-1558.57Show/hide
Query:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNN---TSNPQDNHQYSPMKKWFCC
        +KGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   P +    +     S   D  +  P KKW CC
Subjt:  EKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNN---TSNPQDNHQYSPMKKWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein9.3e-1757.69Show/hide
Query:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKK----SNVAPVN-TAPKNNTSNPQDNHQYS----PMKKWFC
        MA  KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK    S   P +  +P+ N ++ Q+N+  S       KWFC
Subjt:  MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKK----SNVAPVN-TAPKNNTSNPQDNHQYS----PMKKWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGGAGAAAGGTCGTCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCTGCTTCAGCCGAAGGTTTCACAGTAATATTTAGCAAAGCTAGAGATGAGAA
GAAGTCGAATGTGGCTCCTGTAAACACAGCACCAAAAAACAATACATCCAATCCACAAGACAACCATCAGTATTCTCCCATGAAAAAATGGTTTTGCTGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGGAGAAAGGTCGTCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCTGCTTCAGCCGAAGGTTTCACAGTAATATTTAGCAAAGCTAGAGATGAGAA
GAAGTCGAATGTGGCTCCTGTAAACACAGCACCAAAAAACAATACATCCAATCCACAAGACAACCATCAGTATTCTCCCATGAAAAAATGGTTTTGCTGTTTCTGA
Protein sequenceShow/hide protein sequence
MASEKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNVAPVNTAPKNNTSNPQDNHQYSPMKKWFCCF