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Sed0023929 (gene) of Chayote v1 genome

Gene IDSed0023929
OrganismSechium edule (Chayote v1)
DescriptionProtein Ycf2-like
Genome locationLG03:40497700..40500275
RNA-Seq ExpressionSed0023929
SyntenySed0023929
Gene Ontology termsNA
InterPro domainsIPR015410 - Domain of unknown function DUF1985


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]5.5e-3239.89Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LESF++ K+E  ++   HI+MVDD ++F+ YPWGR A+ LLV  +     ++G   + MG
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEVIP LS+ P F+  R  + + R+++   + QP+W++L   +F+ PTLEV P++ + +E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]6.1e-3138.8Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LE F++ K+E +++   +I+MVDD ++F+ YPWGR A+ LLV  +  A  ++G   + + 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEVIP LS+ P F+A R  + + R+++W  ++QP+W++L   +F+  TLEV P++ + +E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]5.0e-3341.57Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGM-
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LESF++ K+E +++   HI+MVDD ++F+ YPWGR A+ LLV  +  A  ++G   + M 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGM-

Query:  GGMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFA
        GG ++ +L WAYEVIP LS+ P F+A R  + + R+++W  + QP+W++L   +F+ PTLEV P++ + +E+ MP+FA
Subjt:  GGMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFA

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]6.1e-3138.8Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LE F++ K+E +++   +I+MVDD ++F+ YPWGR A+ LLV  +  A  ++G   + + 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEVIP LS+ P F+A R  + + R+++W  ++QP+W++L   +F+  TLEV P++ + +E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]3.9e-3038.8Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LESF++ K+E +++   HI+MVDD ++F+ YPWGR A+ LLV  +     ++G   + + 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEV P LS+   F+A R  + + R+++W  + QP+W++L   +F+ PTLEV P++ +  E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like2.7e-3239.89Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LESF++ K+E  ++   HI+MVDD ++F+ YPWGR A+ LLV  +     ++G   + MG
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEVIP LS+ P F+  R  + + R+++   + QP+W++L   +F+ PTLEV P++ + +E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

A0A5A7U6E1 Protein Ycf2-like1.9e-3038.8Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LESF++ K+E +++   HI+MVDD ++F+ YPWGR A+ LLV  +     ++G   + + 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEV P LS+   F+A R  + + R+++W  + QP+W++L   +F+ PTLEV P++ +  E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

A0A5A7UD30 Protein Ycf2-like3.0e-3138.8Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LE F++ K+E +++   +I+MVDD ++F+ YPWGR A+ LLV  +  A  ++G   + + 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEVIP LS+ P F+A R  + + R+++W  ++QP+W++L   +F+  TLEV P++ + +E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

A0A5D3CEX9 Protein Ycf2-like2.4e-3341.57Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGM-
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LESF++ K+E +++   HI+MVDD ++F+ YPWGR A+ LLV  +  A  ++G   + M 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGM-

Query:  GGMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFA
        GG ++ +L WAYEVIP LS+ P F+A R  + + R+++W  + QP+W++L   +F+ PTLEV P++ + +E+ MP+FA
Subjt:  GGMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFA

A0A5D3DCN3 Protein Ycf2-like3.0e-3138.8Show/hide
Query:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG
        LK VY E    V R  LN+ F ++    ++D IKM+ L  LE F++ K+E +++   +I+MVDD ++F+ YPWGR A+ LLV  +  A  ++G   + + 
Subjt:  LKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMG

Query:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE
        G ++ +L WAYEVIP LS+ P F+A R  + + R+++W  ++QP+W++L   +F+  TLEV P++ + +E+ MP+FA  I  E
Subjt:  GMVYALLKWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07240.1 cysteine-type peptidases;cysteine-type peptidases4.7e-0525.56Show/hide
Query:  IKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAAR-GNHMVGMGGMVYALLKWAYEVIPVLSSAP
        ++ + L  ++ F+L       I+  H  M +DL  F +YPWGR ++ +++++I      +     V + G++YAL     E +P +   P
Subjt:  IKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAAR-GNHMVGMGGMVYALLKWAYEVIPVLSSAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACTTAAAAAAGGTTTATTTGGAAGGTGATGATGCCGTGAAGCGGACAATGCTAAATATGGCCTTTAGAGTTAATAAGAGGGCCCCCGAGGAGGATTTGATAAA
GATGTCCTTATTGAACTGCTTGGAGAGCTTTGTACTAGCTAAGAAAGAAAAAGTTAACATTGTGGATAAACACATACTCATGGTGGATGATCTAGACATGTTTAACACAT
ACCCGTGGGGTAGGGCCGCGTACAGGCTACTTGTTTCAAACATCTGTAATGCGGGGGCCGCTAGGGGTAATCATATGGTAGGGATGGGTGGCATGGTTTATGCCCTCTTG
AAATGGGCGTACGAAGTAATACCAGTTCTGAGTTCTGCCCCGGTATTCTATGCAAAGAGAACAGGTGACCTGCTACTGAGGATGTTGAGCTGGGACTTTGAAATGCAGCC
TGAATGGAGAGAACTCCTTACTGGAATATTCGAATGCCCAACGCTTGAGGTCCGTCCACTTATTGTTAGCGAAGAAGAAATGGAGATGCCTTACTTTGCTTTGTCTATTG
CTGAAGAGTTGGCTAGTCGAGGTCGAAGTAGTCCGTTGGAGGGTGGCATAGTAGGGGCCCCGTGTTATTACCTTGGTCAAACATCTGCATCACCCTTGGGGAAACATATC
GACAGTCGTTTCGAGAAGATGGAAAAGGGGATCGATGAGATGTGTGAACAATTATCCTTGTTATTAAGGTCATTCCAAATGTTCACTAAATATGTGAAAACGATATGCAA
GTTAAAACAAGCCGCCCATGTCCATCCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGGTGTGAGACTGACACGTAAACTATGTCGGCTGAACCACC
GCACTGGGGCAAGGAACGGTCGTGGTAGGCTTACACCAGAAGCCGTCCTTGCCTTAACAGGTGGCAATCGTGGGCTCTTGCCAAACATGCCGAGGACATGTCGGTTGCGG
GGCGAGGCAATGCCAAGTCATCATCCCGACCATTGGGGCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAACTTAAAAAAGGTTTATTTGGAAGGTGATGATGCCGTGAAGCGGACAATGCTAAATATGGCCTTTAGAGTTAATAAGAGGGCCCCCGAGGAGGATTTGATAAA
GATGTCCTTATTGAACTGCTTGGAGAGCTTTGTACTAGCTAAGAAAGAAAAAGTTAACATTGTGGATAAACACATACTCATGGTGGATGATCTAGACATGTTTAACACAT
ACCCGTGGGGTAGGGCCGCGTACAGGCTACTTGTTTCAAACATCTGTAATGCGGGGGCCGCTAGGGGTAATCATATGGTAGGGATGGGTGGCATGGTTTATGCCCTCTTG
AAATGGGCGTACGAAGTAATACCAGTTCTGAGTTCTGCCCCGGTATTCTATGCAAAGAGAACAGGTGACCTGCTACTGAGGATGTTGAGCTGGGACTTTGAAATGCAGCC
TGAATGGAGAGAACTCCTTACTGGAATATTCGAATGCCCAACGCTTGAGGTCCGTCCACTTATTGTTAGCGAAGAAGAAATGGAGATGCCTTACTTTGCTTTGTCTATTG
CTGAAGAGTTGGCTAGTCGAGGTCGAAGTAGTCCGTTGGAGGGTGGCATAGTAGGGGCCCCGTGTTATTACCTTGGTCAAACATCTGCATCACCCTTGGGGAAACATATC
GACAGTCGTTTCGAGAAGATGGAAAAGGGGATCGATGAGATGTGTGAACAATTATCCTTGTTATTAAGGTCATTCCAAATGTTCACTAAATATGTGAAAACGATATGCAA
GTTAAAACAAGCCGCCCATGTCCATCCACCACGCCTAACTAAATCTTTGGATCGGTGTCACCGACATAGGGGTGTGAGACTGACACGTAAACTATGTCGGCTGAACCACC
GCACTGGGGCAAGGAACGGTCGTGGTAGGCTTACACCAGAAGCCGTCCTTGCCTTAACAGGTGGCAATCGTGGGCTCTTGCCAAACATGCCGAGGACATGTCGGTTGCGG
GGCGAGGCAATGCCAAGTCATCATCCCGACCATTGGGGCATTTAA
Protein sequenceShow/hide protein sequence
MDNLKKVYLEGDDAVKRTMLNMAFRVNKRAPEEDLIKMSLLNCLESFVLAKKEKVNIVDKHILMVDDLDMFNTYPWGRAAYRLLVSNICNAGAARGNHMVGMGGMVYALL
KWAYEVIPVLSSAPVFYAKRTGDLLLRMLSWDFEMQPEWRELLTGIFECPTLEVRPLIVSEEEMEMPYFALSIAEELASRGRSSPLEGGIVGAPCYYLGQTSASPLGKHI
DSRFEKMEKGIDEMCEQLSLLLRSFQMFTKYVKTICKLKQAAHVHPPRLTKSLDRCHRHRGVRLTRKLCRLNHRTGARNGRGRLTPEAVLALTGGNRGLLPNMPRTCRLR
GEAMPSHHPDHWGI