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Sed0023932 (gene) of Chayote v1 genome

Gene IDSed0023932
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG05:23652278..23652523
RNA-Seq ExpressionSed0023932
SyntenySed0023932
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146810.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus]1.8e-2980.26Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        S + V+GVKE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

XP_008447616.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo]3.0e-2977.63Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

XP_022955437.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]2.1e-3081.82Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

XP_022980756.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]2.7e-3081.82Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]2.1e-3081.82Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

TrEMBL top hitse value%identityAlignment
A0A0A0LCQ8 Epidermal patterning factor-like protein2.9e-3081.33Show/hide
Query:  VKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        +K V+GVKE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEGWKCKCGPSFY P
Subjt:  VKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

A0A1S3BIS6 Epidermal patterning factor-like protein1.4e-2977.63Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

A0A5D3BVF6 Epidermal patterning factor-like protein1.4e-2977.63Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

A0A6J1GTM4 Epidermal patterning factor-like protein1.0e-3081.82Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

A0A6J1IUG9 Epidermal patterning factor-like protein1.3e-3081.82Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWKCKCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 32.8e-1460.38Show/hide
Query:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP
        R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y NY+PEGW+C C P
Subjt:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 62.7e-0945.9Show/hide
Query:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+P
Subjt:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 47.5e-0741.82Show/hide
Query:  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        GSSPP C  KC  C PC+ + VP   + G  + ++   Y PE W+CKCG   ++P
Subjt:  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 17.2e-1040.79Show/hide
Query:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFYIP
        ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY+P GWKC C   FY P
Subjt:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFYIP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 54.4e-0741.82Show/hide
Query:  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        GS PPMC  KC  C PC+A+ VP          +    Y PE W+CKCG   ++P
Subjt:  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.9e-1045.9Show/hide
Query:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+P
Subjt:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

AT2G30370.2 allergen-related1.9e-1045.9Show/hide
Query:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+CKCG   Y+P
Subjt:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

AT3G13898.1 unknown protein2.0e-1560.38Show/hide
Query:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP
        R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y NY+PEGW+C C P
Subjt:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGP

AT3G22820.1 allergen-related3.1e-0841.82Show/hide
Query:  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP
        GS PPMC  KC  C PC+A+ VP          +    Y PE W+CKCG   ++P
Subjt:  GSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP

AT5G10310.1 unknown protein5.1e-1140.79Show/hide
Query:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFYIP
        ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY+P GWKC C   FY P
Subjt:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKCKCGPSFYIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTG
CTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGAACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGT
GTGGCCCTTCCTTTTACATCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTG
CTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGAACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGT
GTGGCCCTTCCTTTTACATCCCTTGA
Protein sequenceShow/hide protein sequence
MQLWLSVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKCKCGPSFYIP