CuGenDBv2

Gene ID	Sed0023939
Organism	Sechium edule (Chayote v1)
Description	Photosystem I iron-sulfur center
Genome location	LG11:19375587..19375826
RNA-Seq Expression	Sed0023939
Synteny	Sed0023939
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR017491 - Photosystem I protein PsaC IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

Homology

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GenBank top hits

e value

%identity

Alignment

YP_001122848.1 photosystem I subunit VII [Phaseolus vulgaris]

1.4e-39

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009138437.1 photosystem I subunit VII [Lathyrus davidii]

3.1e-39

96.3

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        M+HSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009141471.1 photosystem I subunit VII [Lathyrus tingitanus]

1.8e-39

96.3

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVR+YLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009236328.1 photosystem I subunit VII [Gynostemma pentaphyllum]

4.1e-39

96.3

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCK KQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

YP_009334710.1 photosystem I subunit VII [Camassia scilloides]

3.1e-39

96.3

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGL+Y
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

TrEMBL top hits

e value

%identity

Alignment

A0A218KGA0 Photosystem I iron-sulfur center

6.8e-40

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A0A410HFC6 Photosystem I iron-sulfur center

6.8e-40

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A0A6M8P9Q0 Photosystem I iron-sulfur center

6.8e-40

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

D5MAH2 Photosystem I iron-sulfur center

6.8e-40

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

G3ETV0 Photosystem I iron-sulfur center

6.8e-40

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

SwissProt top hits

e value

%identity

Alignment

A4GGE7 Photosystem I iron-sulfur center

1.8e-42

97.53

Show/hide

Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A4QJG7 Photosystem I iron-sulfur center

1.2e-41

96.3

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

A4QJQ1 Photosystem I iron-sulfur center

1.2e-41

96.3

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

P10793 Photosystem I iron-sulfur center

1.8e-42

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

P42046 Photosystem I iron-sulfur center

1.8e-42

97.53

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Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

Arabidopsis top hits

e value

%identity

Alignment

ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding

8.4e-43

96.3

Show/hide

Query:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
        MSHSVKIYDTCIGCTQCV  CPTDVLEMIPW GCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY
Subjt:  MSHSVKIYDTCIGCTQCV--CPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

Sequences

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CDS sequence

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ATGTCACATTCCGTAAAGATTTATGATACATGTATAGGGTGTACTCAATGTGTTTGCCCCACAGATGTATTAGAAATGATACCTTGGGGCGGATGTAAAGCTAAGCAAAT
AGCTTCGGCTCCAAGAACAGAAGATTGTGTTGGTTGTAAGAGATGTGAATCTGCTTGTCCGACAGATTTCTTGAGTGTTCGCGTTTATTTATGGCATGAAACAACTCGAA
GCATGGGTCTAGCTTATTGA

mRNA sequence

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Protein sequence

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MSHSVKIYDTCIGCTQCVCPTDVLEMIPWGGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY

Sed0023939 (gene) of Chayote v1 genome