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Sed0023963 (gene) of Chayote v1 genome

Gene IDSed0023963
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG04:34805057..34805494
RNA-Seq ExpressionSed0023963
SyntenySed0023963
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026123.1 S-protein-like 20, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6885.52Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+KI+N ILLLLF   + SFFIF+IQPD+LYLHGVVY+VRVINGF NNSSLPLVIWCSSKD DLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVREDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

XP_022964484.1 S-protein homolog 5-like [Cucurbita moschata]8.2e-7086.21Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+KI+N ILLLL F+  FSFFIF+IQPD+LYLHGVVY+VRVINGF NNSSLPLVIWCSSKD DLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVREDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

XP_023000578.1 S-protein homolog 5 [Cucurbita maxima]2.1e-7086.9Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+KI+NTILLLL F+  FSFFIF+IQPD+LYLHGVVY+VRVINGF NNSSLPLVIWCSSKD DLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVREDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

XP_023515117.1 S-protein homolog 5-like [Cucurbita pepo subsp. pepo]2.4e-6984.83Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+KI+N I+LLL F+  FSFFIF+IQPD+LYLHGVVY+VRVINGF NNSSLPLVIWCSSKD DLGGRALQEHDDFSW+VTTK+W +NQF CTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVREDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

XP_038875976.1 S-protein homolog 5-like isoform X1 [Benincasa hispida]1.5e-6882.76Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+K + + +L+LFF  +FSFF+F+I PD+ YLH VV++VRVINGF NNSSLPLVIWCSSK+ DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        RSFDAFKVPRDFYRCGNFKKCSWLV EDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

TrEMBL top hitse value%identityAlignment
A0A0A0LNI8 S-protein homolog1.2e-6390.24Show/hide
Query:  IFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCS
        +F+IQPD+LYLHGVV++VRVINGF+NNSSLPLVIWCSSK+ DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCG+FKKCS
Subjt:  IFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCS

Query:  WLVREDGFYFSPDEIHWKKDFQW
        WLV EDGFYFS DEI+WKKDFQW
Subjt:  WLVREDGFYFSPDEIHWKKDFQW

A0A1S4E2Y6 S-protein homolog9.7e-6984.03Show/hide
Query:  KRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRR
        K+K + TI LLLF    FSF +F++QPD+LYLHGV+++VRVINGF+NNSSLPLVIWCSSK+ DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR+
Subjt:  KRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRR

Query:  SFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        SFDAFKVPRDFYRCGNFKKCSWLV EDGFYFSPDEI+WKKDFQW
Subjt:  SFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

A0A5D3CZS1 S-protein homolog9.7e-6984.03Show/hide
Query:  KRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRR
        K+K + TI LLLF    FSF +F++QPD+LYLHGV+++VRVINGF+NNSSLPLVIWCSSK+ DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR+
Subjt:  KRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRR

Query:  SFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        SFDAFKVPRDFYRCGNFKKCSWLV EDGFYFSPDEI+WKKDFQW
Subjt:  SFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

A0A6J1HNC1 S-protein homolog4.0e-7086.21Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+KI+N ILLLL F+  FSFFIF+IQPD+LYLHGVVY+VRVINGF NNSSLPLVIWCSSKD DLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVREDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

A0A6J1KN10 S-protein homolog1.0e-7086.9Show/hide
Query:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK+KI+NTILLLL F+  FSFFIF+IQPD+LYLHGVVY+VRVINGF NNSSLPLVIWCSSKD DLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR
Subjt:  MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVREDGFYFSPDE++WKKDFQW
Subjt:  RSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 26.6e-0631.33Show/hide
Query:  SSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVREDG
        + L L+  C SKD DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C +  +C W +R +G
Subjt:  SSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVREDG

Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family1.5e-0831.65Show/hide
Query:  LVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGNFKKCSWLVREDG
        LV+ C +K  DLG  AL+  +   ++    L ++  ++CT  W    ++FD F+V RD      CG  ++C W + E G
Subjt:  LVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGNFKKCSWLVREDG

AT3G24060.1 Plant self-incompatibility protein S1 family4.8e-4459.86Show/hide
Query:  TILLLLFFLPTFS---FFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRRSF
        TI+LLLF L   S    F  ++QP  ++L G  +DVRVIN F +NSSLPLVIWC+S   DLGGRALQE DDF W     LW    +++CTMKWD+KR+ F
Subjt:  TILLLLFFLPTFS---FFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRRSF

Query:  DAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW
        +AFKV RD  RCG+ KKCSW VREDGFYFS DE++W KDF W
Subjt:  DAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW

AT4G16195.1 Plant self-incompatibility protein S1 family4.7e-0731.33Show/hide
Query:  SSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVREDG
        + L L+  C SKD DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C +  +C W +R +G
Subjt:  SSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGNFKKCSWLVREDG

AT5G04350.1 Plant self-incompatibility protein S1 family1.2e-0730.77Show/hide
Query:  LVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQ
        L + C SKD DLG   L+   D+ +     +W++  FSC M      +    F      +       C W+ REDG YFS D +   K +Q
Subjt:  LVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAAAAATTGTCAACACCATCCTCCTCCTCCTCTTCTTCCTCCCAACATTCTCCTTCTTCATCTTCCTCATTCAACCCGACAAACTATACCTACACGGCGTCGT
CTACGACGTTCGAGTAATCAACGGCTTCGAAAACAACTCATCTTTGCCCTTGGTGATATGGTGTTCCTCAAAAGACATCGATTTGGGAGGCCGGGCCTTGCAAGAACACG
ATGATTTCAGCTGGAAAGTGACAACCAAGCTGTGGAAGAGCAACCAATTCTCTTGTACGATGAAATGGGATGCCAAAAGAAGATCTTTTGATGCGTTTAAGGTTCCTAGA
GACTTTTATCGATGTGGGAATTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGATTTTATTTTAGCCCTGATGAGATTCATTGGAAGAAGGATTTTCAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAAAAATTGTCAACACCATCCTCCTCCTCCTCTTCTTCCTCCCAACATTCTCCTTCTTCATCTTCCTCATTCAACCCGACAAACTATACCTACACGGCGTCGT
CTACGACGTTCGAGTAATCAACGGCTTCGAAAACAACTCATCTTTGCCCTTGGTGATATGGTGTTCCTCAAAAGACATCGATTTGGGAGGCCGGGCCTTGCAAGAACACG
ATGATTTCAGCTGGAAAGTGACAACCAAGCTGTGGAAGAGCAACCAATTCTCTTGTACGATGAAATGGGATGCCAAAAGAAGATCTTTTGATGCGTTTAAGGTTCCTAGA
GACTTTTATCGATGTGGGAATTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGATTTTATTTTAGCCCTGATGAGATTCATTGGAAGAAGGATTTTCAGTGGTGA
Protein sequenceShow/hide protein sequence
MKRKIVNTILLLLFFLPTFSFFIFLIQPDKLYLHGVVYDVRVINGFENNSSLPLVIWCSSKDIDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPR
DFYRCGNFKKCSWLVREDGFYFSPDEIHWKKDFQW