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Sed0023973 (gene) of Chayote v1 genome

Gene IDSed0023973
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin domain-containing protein
Genome locationLG13:4280454..4284625
RNA-Seq ExpressionSed0023973
SyntenySed0023973
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137230.1 ubiquitin domain-containing protein 1 [Cucumis sativus]1.5e-5389.26Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSSQT  DG+IKKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDAL+AAAEAELSLAQAI+DSAGVIVQNADLTICYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]6.8e-5489.26Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSSQTNGDG+IKKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDAL+AAAEAELSLAQAIIDSAGVI+QNADLTICYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

XP_022942916.1 ubiquitin domain-containing protein 1-like [Cucurbita moschata]1.8e-5490.08Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGCVGSSQTNGDG+ KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDAL+AAAEAELSLAQAIIDSAGVIVQNADLT+CYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELP YVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

XP_023552879.1 ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo]4.4e-5388.43Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSSQTNGDG+IKKI KPK WKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDAL+AAAEAELSLAQAIIDSAGVI+QNADLTICYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]2.4e-5490.91Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSSQTNGDG+IKKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDAL+AAAEAELSLAQAIIDSAGVIVQNADLTICYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein7.4e-5489.26Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSSQT  DG+IKKIRKPK WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDAL+AAAEAELSLAQAI+DSAGVIVQNADLTICYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

A0A6J1CN58 ubiquitin domain-containing protein 1-like6.3e-5386.78Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSS+TNGDG+ K+IRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDAL+AAAEAE SLAQAIIDSAGVIVQNADLT+CYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like3.3e-5489.26Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GSSQTNGDG+IKKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDAL+AAAEAELSLAQAIIDSAGVI+QNADLTICYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELPNYVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

A0A6J1FQA3 ubiquitin domain-containing protein 1-like8.7e-5590.08Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGCVGSSQTNGDG+ KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDAL+AAAEAELSLAQAIIDSAGVIVQNADLT+CYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELP YVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X28.7e-5590.08Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGCVGSSQTNGDG+ KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGR EIWDAL+AAAEAELSLAQAIIDSAGVIVQNADLT+CYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNLIRDSS
        AKYELP YVLSEPTNLIRDSS
Subjt:  AKYELPNYVLSEPTNLIRDSS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 19.4e-2245.59Show/hide
Query:  GCVG--SSQTNGDGT---------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQNAD
        GCVG   ++T G G+          + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAI+D A + + +  
Subjt:  GCVG--SSQTNGDGT---------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQNAD

Query:  LTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS
        LT CYDE       G +Y+LP Y L+ P NLI + S
Subjt:  LTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS

Q5EAE3 Ubiquitin domain-containing protein 21.6e-2145.65Show/hide
Query:  GCV-------GSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN
        GCV       GS   N +GT       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +
Subjt:  GCV-------GSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN

Query:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS
          LT CYDE       G +Y+LP Y L+ P N+I + S
Subjt:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS

Q640W6 Ubiquitin domain-containing protein 15.5e-2246.38Show/hide
Query:  GCV-------GSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN
        GCV       GS   N DGT       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +
Subjt:  GCV-------GSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN

Query:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS
          LT CYDE       G +Y+LP Y L+ P N+I + S
Subjt:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS

Q6DG43 Ubiquitin domain-containing protein 21.9e-2246.38Show/hide
Query:  GCVGSS-------QTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN
        GCVGS          N DGT       + +++ KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA+A    +  LAQAIID A + + +
Subjt:  GCVGSS-------QTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN

Query:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS
          LT CYDE       G +Y+LP Y LS P N+I + S
Subjt:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS

Q6PGH0 Ubiquitin domain-containing protein 25.5e-2246.38Show/hide
Query:  GCV-------GSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN
        GCV       GS   N DGT       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +
Subjt:  GCV-------GSSQTNGDGT------IKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA----ELSLAQAIIDSAGVIVQN

Query:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS
          LT CYDE       G +Y+LP Y L+ P N+I + S
Subjt:  ADLTICYDERVSNIIAGAKYELPNYVLSEPTNLIRDSS

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein4.2e-4168.64Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA-ELSLAQAIIDSAGVIVQNADLTICYDERVSNIIA
        MGC  SS+T  +G  +KIR+PK WKHPQPI+R +LTQ+R+EFWDTAPHYGG+KEIWDAL+AAAE  +LSLAQ I++SAGVIVQN DLTICYDE+      
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEA-ELSLAQAIIDSAGVIVQNADLTICYDERVSNIIA

Query:  GAKYELPNYVLSEPTNLI
        G+KYELP YVL +P+NLI
Subjt:  GAKYELPNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein1.9e-4976.72Show/hide
Query:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG
        MGC GS+Q+  DG++KKIRKPKPWKH QPIT+++L +LR+EFWDTAPHYGGRKEIWDAL+AAAEA++SLAQAI+DSAGVIVQN DLT+CYDER      G
Subjt:  MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAG

Query:  AKYELPNYVLSEPTNL
        AKYELP YVLSEPTNL
Subjt:  AKYELPNYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein1.8e-4468.6Show/hide
Query:  MGCVGSSQTNGDGTI--KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNII
        MGC+GSSQ   +G    KKI KPKPW H +PITR+QLT +R+EFWDT+PHYGG++EIW+AL+AAAEA+L LAQ I+DSAGVIVQN DLT+C+DER     
Subjt:  MGCVGSSQTNGDGTI--KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNII

Query:  AGAKYELPNYVLSEPTNLIRD
         GA+YELP YVLSEPTNLIR+
Subjt:  AGAKYELPNYVLSEPTNLIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGTTGGATCATCGCAGACCAACGGAGACGGAACCATAAAGAAGATACGCAAGCCCAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACACA
ACTACGGGATGAGTTTTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAAATTTGGGATGCGCTACAAGCAGCTGCTGAAGCCGAGCTGTCTCTAGCGCAAGCAATTA
TAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAATTTGTTACGACGAGAGAGTGTCCAATATTATTGCAGGTGCAAAATATGAACTGCCCAACTATGTTTTG
AGTGAACCCACCAATTTGATTCGCGACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
TCTAGCTTCTTCTTTCTCCTCTACAAAAAAGCTTCTTCTTCAGCTCTGCAAATTTCTTCTGTTCCCAACTCTCAACGAAGTTTCTGTGAATCGGACCTTGCGTTCAAGCA
AAGCGCAATGGGCTGTGTTGGATCATCGCAGACCAACGGAGACGGAACCATAAAGAAGATACGCAAGCCCAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGC
TCACACAACTACGGGATGAGTTTTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAAATTTGGGATGCGCTACAAGCAGCTGCTGAAGCCGAGCTGTCTCTAGCGCAA
GCAATTATAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAATTTGTTACGACGAGAGAGTGTCCAATATTATTGCAGGTGCAAAATATGAACTGCCCAACTA
TGTTTTGAGTGAACCCACCAATTTGATTCGCGACAGTTCATAAAGAGAGCTGATCGATTTAATGCACTCATTGCTTTCACCTGGCCTTCCTCTAACTTCCTGTAAGTTGC
TTTTCTCAAAATGGACAGTGCAACATCTCTTTTTCACATTTCTTGTACAAAAAAAATTAAGGAAAAAAAACCTTCTGCCAG
Protein sequenceShow/hide protein sequence
MGCVGSSQTNGDGTIKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIIDSAGVIVQNADLTICYDERVSNIIAGAKYELPNYVL
SEPTNLIRDSS