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Sed0023987 (gene) of Chayote v1 genome

Gene IDSed0023987
OrganismSechium edule (Chayote v1)
DescriptionActin depolymerizing factor
Genome locationLG03:46744081..46745064
RNA-Seq ExpressionSed0023987
SyntenySed0023987
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR002108 - Actin-depolymerising factor homology domain
IPR017904 - ADF/Cofilin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022972737.1 actin-depolymerizing factor 1-like [Cucurbita maxima]7.4e-2789.04Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

XP_038881186.1 actin-depolymerizing factor 1-like isoform X1 [Benincasa hispida]2.5e-2775Show/hide
Query:  MEDKTINPIGKPMQHEAWLKLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        M++K     G  +  E   KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  MEDKTINPIGKPMQHEAWLKLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

XP_038881187.1 actin-depolymerizing factor 1-like isoform X2 [Benincasa hispida]2.5e-2775Show/hide
Query:  MEDKTINPIGKPMQHEAWLKLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        M++K     G  +  E   KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  MEDKTINPIGKPMQHEAWLKLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

XP_038881189.1 actin-depolymerizing factor 1-like isoform X3 [Benincasa hispida]7.4e-2789.04Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

XP_038881191.1 actin-depolymerizing factor 1-like isoform X4 [Benincasa hispida]7.4e-2789.04Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

TrEMBL top hitse value%identityAlignment
A0A0A0KX62 ADF-H domain-containing protein1.4e-2687.67Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL A+ECRYAVYDFDFVT ENCQKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

A0A1S3BHX2 actin-depolymerizing factor 1-like6.1e-2784.42Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL A+ECRYAVYDFDFVT ENCQKSRI F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

A0A5A7U187 Actin-depolymerizing factor 1-like6.1e-2784.42Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL A+ECRYAVYDFDFVT ENCQKSRI F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

A0A6J1HFY8 actin-depolymerizing factor 1-like4.7e-2787.67Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELKS+RTHRFI+FKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

A0A6J1I5N8 actin-depolymerizing factor 1-like3.6e-2789.04Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELKS+RTHRFIVFKIEEKLKQVVVEKL  P+QSY+DFAASL ADECRYAVYDFDFVT ENCQKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

SwissProt top hitse value%identityAlignment
Q39250 Actin-depolymerizing factor 12.9e-2672.73Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQVVVEK+ +P Q+Y++FAA L ADECRYA+YDFDFVT ENCQKS+I F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

Q6EUH7 Actin-depolymerizing factor 14.7e-2472.6Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELK++R+ RFIVFKI EK++QVVV++L +P +SYDDF A L ADECRYAV+DFDFVT ENCQKS+I F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

Q9FVI1 Actin-depolymerizing factor 27.2e-2575.34Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELK++RT+RFI++KIEEK K+VVVEKL  PT+SY+DF A L ADECRYAVYDFDF+T EN QKSRI F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

Q9FVI2 Actin-depolymerizing factor 12.6e-2776.62Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQVVVEK+  PT+SY+DFAASL  +ECRYAVYDFDFVT ENCQKSRI F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

Q9ZSK3 Actin-depolymerizing factor 42.9e-2672.73Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQV+VEK+  P  +Y+DFAASL ADECRYA+YDFDFVT ENCQKS+I F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

Arabidopsis top hitse value%identityAlignment
AT1G01750.1 actin depolymerizing factor 112.8e-2465.75Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF
        KLKFLELK++R +RFIVFKI+EK +QV+++KL  P ++Y+DF  S+  DECRYAVYD+DF TPENCQKS+I F
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILF

AT3G46010.1 actin depolymerizing factor 12.1e-2772.73Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQVVVEK+ +P Q+Y++FAA L ADECRYA+YDFDFVT ENCQKS+I F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

AT3G46010.2 actin depolymerizing factor 12.1e-2772.73Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQVVVEK+ +P Q+Y++FAA L ADECRYA+YDFDFVT ENCQKS+I F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

AT5G59890.1 actin depolymerizing factor 42.1e-2772.73Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQV+VEK+  P  +Y+DFAASL ADECRYA+YDFDFVT ENCQKS+I F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC

AT5G59890.2 actin depolymerizing factor 42.1e-2772.73Show/hide
Query:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC
        KL+FLELK++RTHRFIV+KIEEK KQV+VEK+  P  +Y+DFAASL ADECRYA+YDFDFVT ENCQKS+I F   C
Subjt:  KLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATAAAACGATTAATCCCATAGGCAAGCCAATGCAGCATGAGGCATGGCTCAAGCTAAAGTTCTTGGAGCTCAAGTCGGAAAGAACTCATCGTTTCATCGTCTT
TAAGATCGAGGAGAAGCTGAAGCAAGTAGTTGTAGAGAAACTCAGCAGGCCTACCCAAAGTTATGATGATTTTGCTGCAAGTCTCCTTGCTGACGAGTGTCGTTACGCTG
TTTACGATTTCGACTTCGTCACCCCCGAAAATTGCCAAAAAAGCAGGATTCTCTTCAATCTCTCCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATAAAACGATTAATCCCATAGGCAAGCCAATGCAGCATGAGGCATGGCTCAAGCTAAAGTTCTTGGAGCTCAAGTCGGAAAGAACTCATCGTTTCATCGTCTT
TAAGATCGAGGAGAAGCTGAAGCAAGTAGTTGTAGAGAAACTCAGCAGGCCTACCCAAAGTTATGATGATTTTGCTGCAAGTCTCCTTGCTGACGAGTGTCGTTACGCTG
TTTACGATTTCGACTTCGTCACCCCCGAAAATTGCCAAAAAAGCAGGATTCTCTTCAATCTCTCCTGTTAATATGAGTTACATTGTTAATAATGAAGGTCTCCTGATAAT
TCAAGGGTAAGAAGCAAGATTATAAATTCAAGCTCCAGATTCAAGAGAGAACTCGATGGAATACGAGTAGAGCTGCAAGCAACTGATCCAACCGAGATGGGTCTCGATGT
TATTCGAAGCCGTGCCAACTGAACACGAAACATAA
Protein sequenceShow/hide protein sequence
MEDKTINPIGKPMQHEAWLKLKFLELKSERTHRFIVFKIEEKLKQVVVEKLSRPTQSYDDFAASLLADECRYAVYDFDFVTPENCQKSRILFNLSC