CuGenDBv2

Gene ID	Sed0023994
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG02:48324603..48325534
RNA-Seq Expression	Sed0023994
Synteny	Sed0023994
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147637.1 uncharacterized protein LOC101206709 [Cucumis sativus]

2.5e-28

83.13

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Query:  MASWKKTITTPFRKACTIFNQNPRD-PKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQNPRD PKKSHS+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILD KANS A T     N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRD-PKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS

XP_008439007.1 PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo]

1.0e-29

84.15

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQNPRDPKKSHS+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILD KANS A T     N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS

XP_022138108.1 uncharacterized protein LOC111009357 [Momordica charantia]

5.1e-29

83.95

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQ PRDPKKSHS+SEQEKR+DVR+LQGEVMACGYEDVHVMWSILDKANS AA  A   N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS

XP_022980000.1 uncharacterized protein LOC111479526 [Cucurbita maxima]

5.1e-29

83.95

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQ+PRDPKKS S+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILDKANS   T AT  N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS

XP_038898749.1 uncharacterized protein LOC120086267 [Benincasa hispida]

2.7e-30

83.95

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQN RDPKKSHS+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILDKANSIA       N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5H1 Uncharacterized protein

1.2e-28

83.13

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Query:  MASWKKTITTPFRKACTIFNQNPRD-PKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQNPRD PKKSHS+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILD KANS A T     N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRD-PKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS

A0A1S3AXS6 uncharacterized protein LOC103483930 isoform X3

5.0e-30

84.15

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQNPRDPKKSHS+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILD KANS A T     N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS

A0A5A7U9W0 Uncharacterized protein

5.0e-30

84.15

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQNPRDPKKSHS+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILD KANS A T     N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILD-KANSIAATNATGYNISS

A0A6J1CC51 uncharacterized protein LOC111009357

2.5e-29

83.95

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQ PRDPKKSHS+SEQEKR+DVR+LQGEVMACGYEDVHVMWSILDKANS AA  A   N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS

A0A6J1IUX8 uncharacterized protein LOC111479526

2.5e-29

83.95

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS
        MASWKKTI +PFRKACTIFNQ+PRDPKKS S+SEQEKR+DVRNLQGEVMACGYEDVHVMWSILDKANS   T AT  N+SS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G48330.1 unknown protein

2.1e-17

59.42

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNS-EQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANS
        MASWKKTI TPF+KA T FNQ  +  + +++ + E+ ++  V+ LQG+VMACGYEDV VMWSILDK+NS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKKSHSNS-EQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANS

AT3G17580.1 unknown protein

5.1e-19

62.67

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Query:  MASWKKTITTPFRKACTIFNQNPRDPKK-------SHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANS
        MASWKKTI TPF+KA T FNQ  + PKK       + +  E EKR+ V+ LQGEVMACGY+DV VMWSILDK+NS
Subjt:  MASWKKTITTPFRKACTIFNQNPRDPKK-------SHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANS

Sequences

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CDS sequence

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ATGGCTTCATGGAAGAAAACCATCACCACCCCATTCCGAAAGGCGTGCACCATCTTCAACCAGAACCCGAGAGACCCCAAAAAATCTCATTCCAACTCAGAGCAAGAGAA
GCGATTGGATGTAAGAAATCTTCAAGGAGAGGTGATGGCATGTGGATATGAAGACGTGCATGTGATGTGGTCTATTTTAGACAAGGCCAATTCTATTGCCGCCACTAATG
CTACCGGCTACAATATATCTTCGTAA

mRNA sequence

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CTCAACCTCCGGATCTTGCCTTCTCATTTCCTTATTTCTTTTCTTCCATTCTCTCAAACTTTGCTATATATTCTCTACCATTTCACCTCCAACTCTTTTCTCAACTAAAC
ACACATTTCTCTCTCATTACTAATATGGCTTCATGGAAGAAAACCATCACCACCCCATTCCGAAAGGCGTGCACCATCTTCAACCAGAACCCGAGAGACCCCAAAAAATC
TCATTCCAACTCAGAGCAAGAGAAGCGATTGGATGTAAGAAATCTTCAAGGAGAGGTGATGGCATGTGGATATGAAGACGTGCATGTGATGTGGTCTATTTTAGACAAGG
CCAATTCTATTGCCGCCACTAATGCTACCGGCTACAATATATCTTCGTAACCGACGTAGTTTTCGCCACGATCGATCAATGTCGGTTTCTTAATTGTTGTATATAAAGCA
TAATATGTCACTCTCTCTATGTAATTTCTGAGTGGATGATTTTGTTATGTGTAGGGAAGGAATCCCCATGATTTGAAGCTCTTAATCATGGTGAGATTTAAGGTTTTTAT
TACCTAATTTTTAATTAATGCAAAAAAAAAAAACTAAATCTCTTTCTCTCTCTATCTTGGAAATGGAGCCTTATCTCTGAAAAGATATTCAGGTCTGATTGGTTGGTCAT
ATGTAAGTTATACTTTTATGTACCACTTTCAAGGACTGAAATTGAGAGGATATGAAAAAACTTGGGTTTCTTAGAATTATTTCTTTCTTTTGTTGTAAATTAAACTTATT
ATAATTAAATCCTTTTTGTTTGTTTTCTTAGAA

Protein sequence

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MASWKKTITTPFRKACTIFNQNPRDPKKSHSNSEQEKRLDVRNLQGEVMACGYEDVHVMWSILDKANSIAATNATGYNISS

Sed0023994 (gene) of Chayote v1 genome