; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0023999 (gene) of Chayote v1 genome

Gene IDSed0023999
OrganismSechium edule (Chayote v1)
DescriptionSBP-type domain-containing protein
Genome locationLG04:42649356..42652121
RNA-Seq ExpressionSed0023999
SyntenySed0023999
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015205.1 hypothetical protein SDJN02_22838, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-6581.66Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTK-AGS
        MV KLQS KGGGG +KVGATGTISSLM +ELETMRSGP+K V SKNK  SATS  SSAASIPKRL QSKSFDEVN GRRY++ N+RSFGNSHNTTK AGS
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTK-AGS

Query:  RDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        RDVHR+PMLGS D + N N YR+KPERKGLRAVAIVDVKCN+PD+AW SRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

XP_004149171.1 uncharacterized protein LOC101215948 [Cucumis sativus]1.8e-6582.35Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSA--TSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG
        MVQKLQ +KGGGG VKVGATGTISSLMM+ELE+MRS  +K V SKNK  SA  T+T SSAASIPKRL QSKSF EV + RRYNS NNRSFGNSHN TK G
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSA--TSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG

Query:  SRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        SRDVHRMPML S+D+YT+GNSYREKPERKGLRAVAIVDVKCN+PDRAW SRPLSSRLRKLGFSKLSETFA
Subjt:  SRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

XP_008454517.1 PREDICTED: uncharacterized protein LOC103494914 [Cucumis melo]7.0e-6580.7Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTG---SSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA
        MVQKLQ +KGGGG +KVGATGTISSLMM+ELE+MRS  +K V SKNK  SAT+T    SSA SIPKRL QSKSF EV + RRYNS NNRSFGNSHN TK 
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTG---SSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA

Query:  GSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        GSRDVHRMPML S+D+YT+GNSYREKPERKGLRAVAIVDVKCN+PDRAW SRPLSSRLRKLGFSKLSETFA
Subjt:  GSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

XP_022139743.1 uncharacterized protein LOC111010581 [Momordica charantia]8.9e-6882.46Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATST--GSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG
        M QKLQS+KGGGG +KVGATGTISSLMM+ELE+MRSGPQKSVASKNK LS+T+T   SSAASIPKRL QS+S DEV+ GRRYNS NNRSFGNSHN+TK  
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATST--GSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG

Query:  SRDVHRMPMLGSDDIYTNG-NSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        SRDVHRMPMLGS+D YT+G NSYR KPERKGLRAVAIVDVKCN+PDRAW SRPLS+RLRKLGF+KLSETFA
Subjt:  SRDVHRMPMLGSDDIYTNG-NSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

XP_023523864.1 uncharacterized protein LOC111787980 [Cucurbita pepo subsp. pepo]7.0e-6581.07Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA-GS
        MV K QS KGGGG +KVGATGTISSLM +ELETMR+GPQK V SKNK  SATS  SSAASIPKRL Q+KSFDEVN GRRYN+ N+RSFGNSHNTTKA GS
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA-GS

Query:  RDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        RDVHR+PMLGS D + N N YR+KPERKGLRAVAIVDVKCN+PD+AW SRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

TrEMBL top hitse value%identityAlignment
A0A0A0LAQ8 Uncharacterized protein8.9e-6682.35Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSA--TSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG
        MVQKLQ +KGGGG VKVGATGTISSLMM+ELE+MRS  +K V SKNK  SA  T+T SSAASIPKRL QSKSF EV + RRYNS NNRSFGNSHN TK G
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSA--TSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG

Query:  SRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        SRDVHRMPML S+D+YT+GNSYREKPERKGLRAVAIVDVKCN+PDRAW SRPLSSRLRKLGFSKLSETFA
Subjt:  SRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

A0A1S3BYW8 uncharacterized protein LOC1034949143.4e-6580.7Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTG---SSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA
        MVQKLQ +KGGGG +KVGATGTISSLMM+ELE+MRS  +K V SKNK  SAT+T    SSA SIPKRL QSKSF EV + RRYNS NNRSFGNSHN TK 
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTG---SSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA

Query:  GSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        GSRDVHRMPML S+D+YT+GNSYREKPERKGLRAVAIVDVKCN+PDRAW SRPLSSRLRKLGFSKLSETFA
Subjt:  GSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

A0A5D3B9E2 Uncharacterized protein3.4e-6580.7Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTG---SSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA
        MVQKLQ +KGGGG +KVGATGTISSLMM+ELE+MRS  +K V SKNK  SAT+T    SSA SIPKRL QSKSF EV + RRYNS NNRSFGNSHN TK 
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTG---SSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKA

Query:  GSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        GSRDVHRMPML S+D+YT+GNSYREKPERKGLRAVAIVDVKCN+PDRAW SRPLSSRLRKLGFSKLSETFA
Subjt:  GSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

A0A6J1CGE9 uncharacterized protein LOC1110105814.3e-6882.46Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATST--GSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG
        M QKLQS+KGGGG +KVGATGTISSLMM+ELE+MRSGPQKSVASKNK LS+T+T   SSAASIPKRL QS+S DEV+ GRRYNS NNRSFGNSHN+TK  
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATST--GSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAG

Query:  SRDVHRMPMLGSDDIYTNG-NSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        SRDVHRMPMLGS+D YT+G NSYR KPERKGLRAVAIVDVKCN+PDRAW SRPLS+RLRKLGF+KLSETFA
Subjt:  SRDVHRMPMLGSDDIYTNG-NSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

A0A6J1FHN9 uncharacterized protein LOC1114458745.8e-6581.07Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTK-AGS
        MV KLQS KGGGG +KVGATGTISSLM +ELETMRSGP+K V SKNK  SATS  S AASIPKRL QSKSFDEVN GRRY++ N+RSFGNSHNTTK AGS
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTK-AGS

Query:  RDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA
        RDVHR+PMLGS D + N N YR+KPERKGLRAVAIVDVKCN+PD+AW SRPLSSRLRKLGFSKLSETFA
Subjt:  RDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54850.1 unknown protein4.2e-2335.24Show/hide
Query:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRS---------------------GPQKSVASKNKPLSATSTGSSAASI----------PKRLHQSK
        MVQKL+ +KGGGG +K+GATGT+++LM +EL++M+                      G   S   + KP  ++   SS++++           K  HQ  
Subjt:  MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRS---------------------GPQKSVASKNKPLSATSTGSSAASI----------PKRLHQSK

Query:  SF--DEVNTGRRYN-----------SANNRSFGNSHNTTKAGSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLR
            D V T + +N           S N R+    HNT     +  H++PMLGS+++   G   RE    K +  V IVDVKC +PDRAW + P++SRL+
Subjt:  SF--DEVNTGRRYN-----------SANNRSFGNSHNTTKAGSRDVHRMPMLGSDDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLR

Query:  KLGFSKLSET
        KLGFSKL+E+
Subjt:  KLGFSKLSET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGAAATTGCAATCAGTCAAAGGTGGTGGAGGGCCCGTTAAGGTCGGAGCTACTGGAACGATAAGTTCCCTGATGATGAAGGAATTAGAGACAATGAGATCCGG
CCCCCAGAAGTCGGTAGCTTCCAAAAACAAACCTTTATCTGCTACTTCAACTGGTTCATCTGCTGCTTCCATTCCTAAAAGACTACATCAAAGTAAATCGTTTGATGAGG
TAAACACTGGTAGAAGATATAACAGTGCTAATAACAGAAGTTTTGGGAACTCACATAACACGACTAAAGCCGGTTCGAGGGATGTCCACCGAATGCCAATGCTTGGTTCT
GATGATATTTATACCAATGGAAATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCTGTTGCAATTGTGGATGTTAAGTGCAATAGCCCAGATAGAGCATGGGG
TAGCCGCCCTCTATCAAGTCGACTAAGAAAACTCGGTTTTTCAAAGCTATCAGAAACCTTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
GTTGAAGTTTGACTGTTTGCTGGAGAAAGCAAATAAGACAGAAATTGTAAATCTAATTTCACCCCATTCTTCTCTGGAGCTCCACCTTCACATCTTGTTTCCCGTTCATC
TCACTCACTCAAGAATTTCCACATTAAAAACCCCTTTTTTCCCTTTGATTTCCCTGTTTCTGTGGCTCATTTTGTTTCTCTCCCATTCTTGGCTGCAGATTTGTTGATTT
TCTCTTCTGGGCGATGATACGATAATGAGCTGTTAGATTGCTTAGCACTTTTCGTTTTTCAAGCCAAGTATTGAAGGTTTGCCTCTTCCCTCTTTAGAGATTACTTGCTC
ACCTAACAAAAAGATGGTTCAGAAATTGCAATCAGTCAAAGGTGGTGGAGGGCCCGTTAAGGTCGGAGCTACTGGAACGATAAGTTCCCTGATGATGAAGGAATTAGAGA
CAATGAGATCCGGCCCCCAGAAGTCGGTAGCTTCCAAAAACAAACCTTTATCTGCTACTTCAACTGGTTCATCTGCTGCTTCCATTCCTAAAAGACTACATCAAAGTAAA
TCGTTTGATGAGGTAAACACTGGTAGAAGATATAACAGTGCTAATAACAGAAGTTTTGGGAACTCACATAACACGACTAAAGCCGGTTCGAGGGATGTCCACCGAATGCC
AATGCTTGGTTCTGATGATATTTATACCAATGGAAATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGCTGTTGCAATTGTGGATGTTAAGTGCAATAGCCCAG
ATAGAGCATGGGGTAGCCGCCCTCTATCAAGTCGACTAAGAAAACTCGGTTTTTCAAAGCTATCAGAAACCTTTGCTTGACTCTACAAAACTTTCACCATTTTCTTCACA
ACAGGGCAGATCTATAGGCTGCTTTCTATCTGAATATTTGTAATTGTAGGATTTCAAATGATGCATAGAAGGATCTACGGGTAATTAGATTATATGGGAGCTGTGAATCT
CATAGGCAGACCCGAAATCGACGATTGGTTGTATTGTAGCATATCAAACTCGGCCCTTGGTCCCCCTTCATCAGGAGGCTGCTCTGATTCAAGTGTCTTCTCTTGTAGGC
AATTTAGCTGGATTGATCACCCGGTCGTCGCGCTCTGTTGGGAGGCAATACCGTTTTCTGGTTAGATGTTTTGTTCTTTAATCTATAATGAAAGAAAGCTGGCCTGGCTT
TGTAATTTGACATGTTTGGAACCTAAACTTGTAGGTTGTAATAGTAAAGATTGGGTTGCCAGTTGCCACTTGGATCTCTTTTTTAGTTTATGCAGTGTATTTTGATCATT
TCAGTGTGATTATAATTTGCTCCTCTTTTTTTTCTTGGCTGGTGATGTAATGGACCAACTTATCAAATTTACCATTGATAACC
Protein sequenceShow/hide protein sequence
MVQKLQSVKGGGGPVKVGATGTISSLMMKELETMRSGPQKSVASKNKPLSATSTGSSAASIPKRLHQSKSFDEVNTGRRYNSANNRSFGNSHNTTKAGSRDVHRMPMLGS
DDIYTNGNSYREKPERKGLRAVAIVDVKCNSPDRAWGSRPLSSRLRKLGFSKLSETFA