; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024018 (gene) of Chayote v1 genome

Gene IDSed0024018
OrganismSechium edule (Chayote v1)
Descriptionrho GTPase-activating protein gacH
Genome locationLG02:47142853..47144457
RNA-Seq ExpressionSed0024018
SyntenySed0024018
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597689.1 hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia]1.3e-6769.27Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT--------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRA
        MS  PNMATITAALERSLQNCSL+        H HQQQ            + N   + +L  P +LDLNSHISLPYHWEQCLDLKTGEIYYINWRNGM+A
Subjt:  MSTAPNMATITAALERSLQNCSLT--------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRA

Query:  KEDPRSITEDHYSEDYYYYSDDDSSC-DSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS
        KEDPRSITEDHYSEDYYY  DDD    DS ESSTESSNNNN +  N+A + +Q+E+E+E+E+ VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRS
Subjt:  KEDPRSITEDHYSEDYYYYSDDDSSC-DSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS

Query:  ENDIP
        EN+IP
Subjt:  ENDIP

KAG7029133.1 hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-6869.76Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT--------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRA
        MST PNMATITAALERSLQNCSL+        H HQQQ            + N   + +L  P +LDLNSHISLPYHWEQCLDLKTGEIYYINWRNGM+A
Subjt:  MSTAPNMATITAALERSLQNCSLT--------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRA

Query:  KEDPRSITEDHYSEDYYYYSDDDSSC-DSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS
        KEDPRSITEDHYSEDYYY  DDD    DS+ESSTESSNNNN +  N+A + +Q+E+E+E+E+ VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRS
Subjt:  KEDPRSITEDHYSEDYYYYSDDDSSC-DSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS

Query:  ENDIP
        EN+IP
Subjt:  ENDIP

XP_022932700.1 rho GTPase-activating protein gacH [Cucurbita moschata]2.1e-6871.43Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK
        MST PNMATITAALERSLQNCSL+       H HQQQ            + N   + +L  P +LDLNSHISLPYHWEQCLDLKTGEIYYINWRNGM+AK
Subjt:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK

Query:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEN
        EDPR ITEDHYSED YYYSDDD   DS+ESSTESSNNNN +K N+A + +Q+E+E+E+ED VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN
Subjt:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEN

Query:  DIP
        +IP
Subjt:  DIP

XP_022972321.1 uncharacterized protein LOC111470894 [Cucurbita maxima]2.4e-6970.73Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK
        MST PNMATITAALERSLQNCSL+       H H QQ   A          N   +H+L  P +LDLNSHISLPYHWEQCLDLKTGEIYYINWRNGM+AK
Subjt:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK

Query:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDH--VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS
        EDPRSITEDHYSEDYYY+ DDD   DS+ESSTESSNNNN +  N+A + +Q+EQE+E+E+   VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRS
Subjt:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDH--VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS

Query:  ENDIP
        EN+IP
Subjt:  ENDIP

XP_023540596.1 histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-6770.59Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT--------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRA
        MST PNMATITAALERSLQNCSL+        H HQQQ            + N   + +L  P +LDLNSHISLP HWEQCLDLKTGEIYYINWRNGM+A
Subjt:  MSTAPNMATITAALERSLQNCSLT--------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRA

Query:  KEDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE
        KEDPRSITEDHYSED YYYSDDD   DS+ESSTESSNNNN +  N+A + +Q+E+E+E+ED VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSE
Subjt:  KEDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE

Query:  NDIP
        N+IP
Subjt:  NDIP

TrEMBL top hitse value%identityAlignment
A0A6J1F2V9 rho GTPase-activating protein gacH1.0e-6871.43Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK
        MST PNMATITAALERSLQNCSL+       H HQQQ            + N   + +L  P +LDLNSHISLPYHWEQCLDLKTGEIYYINWRNGM+AK
Subjt:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK

Query:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEN
        EDPR ITEDHYSED YYYSDDD   DS+ESSTESSNNNN +K N+A + +Q+E+E+E+ED VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN
Subjt:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEN

Query:  DIP
        +IP
Subjt:  DIP

A0A6J1GTR7 uncharacterized protein LOC111457490 isoform X23.5e-6167.5Show/hide
Query:  MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITE
        MS AP MAT+TAALERSL+NCSL+H     P+   SDSH      G  TH LH     LNSH+SLPYHWEQCLDLKTGEIYYINWRNGM+AKEDPR  TE
Subjt:  MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITE

Query:  -DHYSEDYYYYS----DDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
         D YS+DYY YS    DDDSS DSEESST SSNN N +KN           E+++E+ VLVVAGCK CLMYFMVPKHLE+CPKCS+G+LLHFDRSENDIP
Subjt:  -DHYSEDYYYYS----DDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

A0A6J1GTV5 protein Tube-like isoform X16.5e-6063.98Show/hide
Query:  MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITE
        MS AP MAT+TAALERSL+NCSL+H     P+   SDSH      G  TH LH     LNSH+SLPYHWEQCLDLKTGEIYYINWRNGM+AKEDPR  TE
Subjt:  MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITE

Query:  -DHYSEDYYYYS---------------DDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQL
         D YS+DYY YS               DDDSS DSEESST SSNN N +KN           E+++E+ VLVVAGCK CLMYFMVPKHLE+CPKCS+G+L
Subjt:  -DHYSEDYYYYS---------------DDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQL

Query:  LHFDRSENDIP
        LHFDRSENDIP
Subjt:  LHFDRSENDIP

A0A6J1I5N3 uncharacterized protein LOC1114708941.2e-6970.73Show/hide
Query:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK
        MST PNMATITAALERSLQNCSL+       H H QQ   A          N   +H+L  P +LDLNSHISLPYHWEQCLDLKTGEIYYINWRNGM+AK
Subjt:  MSTAPNMATITAALERSLQNCSLT-------HPHQQQPLSAISDSHLIPSSNGGQTHVLHQP-SLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAK

Query:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDH--VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS
        EDPRSITEDHYSEDYYY+ DDD   DS+ESSTESSNNNN +  N+A + +Q+EQE+E+E+   VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRS
Subjt:  EDPRSITEDHYSEDYYYYSDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDH--VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS

Query:  ENDIP
        EN+IP
Subjt:  ENDIP

A0A6J1IQL3 methionine aminopeptidase 2-like1.7e-6065.85Show/hide
Query:  MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITE
        MS  P MAT+TAALERSLQNCSL+H     P+   SDSH      G  TH LH     LNSH+SLPYHWEQCLDLKTGEIYYINWRNGM+AKEDPR  TE
Subjt:  MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITE

Query:  -DHYSEDYYYYS---------DDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS
         D YS+DYY YS         DDDSS DSEESSTESSNN N +KN           E+++E+ VLVVAGCK CLMYFMVPKHLE+CPKCS+G+LL+FDRS
Subjt:  -DHYSEDYYYYS---------DDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRS

Query:  ENDIP
        ENDIP
Subjt:  ENDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28070.1 unknown protein7.4e-3246.73Show/hide
Query:  MATITAALERSLQNCSLTHPHQQQPLS-AISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPR-SITEDHY-
        MA IT  LERS+QNCSL            +SD H IP S+           L+L+SH S+P H EQCLDLKTGEIYY +W +GMR KEDPR S++  +Y 
Subjt:  MATITAALERSLQNCSLTHPHQQQPLS-AISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPR-SITEDHY-

Query:  ------SEDYYYYSDDDSS-CDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
              S    + S++ SS  +SEESS+ESS ++            ++  ++E+++ VLVVAGCK+CLMYFMVPK  +DCPKC+T QLLHFD+  +  P
Subjt:  ------SEDYYYYSDDDSS-CDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)2.6e-4556.32Show/hide
Query:  APNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSI-TEDH
        APNM TIT +LE+S+ NCSL    ++     + D     SSN   T +  + +L+LNSH+SLP HWEQCLDLKTGEIYYINW+NGMR KEDPR +   D 
Subjt:  APNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSI-TEDH

Query:  YSEDYY--YYSDDDSS-CDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDR
         S D Y    S++DSS  DSEESS+ESS    +S+ N  E  +++E+E+E+E+ VLVVAGCK+C MYFMVPK +EDCPKC+  QLLHFDR
Subjt:  YSEDYY--YYSDDDSS-CDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDR

AT2G33510.2 unknown protein2.7e-4252.2Show/hide
Query:  APNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLK---------------TGEIYYINWRNG
        APNM TIT +LE+S+ NCSL    ++     + D     SSN   T +  + +L+LNSH+SLP HWEQCLDLK               TGEIYYINW+NG
Subjt:  APNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLK---------------TGEIYYINWRNG

Query:  MRAKEDPRSI-TEDHYSEDYY--YYSDDDSS-CDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQL
        MR KEDPR +   D  S D Y    S++DSS  DSEESS+ESS    +S+ N  E  +++E+E+E+E+ VLVVAGCK+C MYFMVPK +EDCPKC+  QL
Subjt:  MRAKEDPRSI-TEDHYSEDYY--YYSDDDSS-CDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQL

Query:  LHFDR
        LHFDR
Subjt:  LHFDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAGCTCCAAATATGGCAACCATTACCGCGGCTTTAGAGCGCTCTCTCCAGAACTGTTCTTTGACTCATCCTCATCAACAACAACCTCTTTCAGCAATATCTGA
TTCACACCTTATTCCTTCCTCTAATGGCGGCCAAACCCATGTTCTCCATCAACCTTCCTTGGATCTCAACTCCCATATCTCCCTCCCTTACCACTGGGAGCAGTGCCTCG
ATTTGAAGACAGGGGAGATATATTACATAAACTGGAGGAATGGAATGAGGGCAAAGGAAGATCCAAGGTCCATTACAGAAGATCATTACAGTGAAGATTACTATTACTAC
TCGGACGACGACAGCTCTTGCGACAGCGAGGAGTCGTCGACCGAGTCCTCGAACAACAACAACAACAGCAAGAACAACTTCGCGGAATTAGCGCAACAACAAGAACAAGA
ACAAGAAAAAGAAGATCATGTGTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCAAAACACCTTGAGGATTGCCCTAAATGCAGCACTGGTCAGC
TTCTCCATTTTGATCGCTCTGAAAATGATATTCCATGA
mRNA sequenceShow/hide mRNA sequence
GCTTTGTTAGTGTATGTGTATGTGTGTGTTTTGTAATGAGTACAGCTCCAAATATGGCAACCATTACCGCGGCTTTAGAGCGCTCTCTCCAGAACTGTTCTTTGACTCAT
CCTCATCAACAACAACCTCTTTCAGCAATATCTGATTCACACCTTATTCCTTCCTCTAATGGCGGCCAAACCCATGTTCTCCATCAACCTTCCTTGGATCTCAACTCCCA
TATCTCCCTCCCTTACCACTGGGAGCAGTGCCTCGATTTGAAGACAGGGGAGATATATTACATAAACTGGAGGAATGGAATGAGGGCAAAGGAAGATCCAAGGTCCATTA
CAGAAGATCATTACAGTGAAGATTACTATTACTACTCGGACGACGACAGCTCTTGCGACAGCGAGGAGTCGTCGACCGAGTCCTCGAACAACAACAACAACAGCAAGAAC
AACTTCGCGGAATTAGCGCAACAACAAGAACAAGAACAAGAAAAAGAAGATCATGTGTTGGTGGTTGCAGGTTGCAAGAGCTGCTTAATGTATTTTATGGTGCCAAAACA
CCTTGAGGATTGCCCTAAATGCAGCACTGGTCAGCTTCTCCATTTTGATCGCTCTGAAAATGATATTCCATGAATCAAAAACTTCCCTTTTTTTCATTTTTATTTTCATT
TTCATTTGCATTTTCATATTCCCCTTTCTTTTTCTTTTTTCCCTTTGATTCATGGGAAAAAGAAGAAAAACAAAAAGGGAAAATTGTGAGAGAAACCCTTTTTTTTTTTC
TCTTTTTTATTTTTGTTTTTAAATTGTTTCCATGTGTATTTGTCAGTAAGGGAGGCAAATGGGTTTTGGTTTTAGTTTTGATTTTAGTTTTGGCTTTAGTTTTATAAATT
AGTTCAATTTTTTTTTTCTTAGATTTCTTTTCTTTTTGAACTCTAATGGGAAATGGTGGAAGAATGAGGATCATGTGAATGGGTG
Protein sequenceShow/hide protein sequence
MSTAPNMATITAALERSLQNCSLTHPHQQQPLSAISDSHLIPSSNGGQTHVLHQPSLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMRAKEDPRSITEDHYSEDYYYY
SDDDSSCDSEESSTESSNNNNNSKNNFAELAQQQEQEQEKEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP