; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0024025 (gene) of Chayote v1 genome

Gene IDSed0024025
OrganismSechium edule (Chayote v1)
DescriptionPectin lyase-like superfamily protein
Genome locationLG06:2160538..2186458
RNA-Seq ExpressionSed0024025
SyntenySed0024025
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045593.1 exopolygalacturonase-like [Cucumis melo var. makuwa]6.6e-8655.62Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++LP+LL     +KAQ ++G+VFDITK GAKPN DVT                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI
             + + YVD         +  Q   GW  +   L  +   L  NL+ NF+ NSIVKDITSLDSKN+HINLLGCKNLTFDH+TITAP NSPNTDGIH+
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI

Query:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV
          SEQINI+NT IATGDDC+SVG TNKQ+ IS+VTCGPGHGI+IGSLGKY  E+ V GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVNV
Subjt:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV

Query:  SNPVIIDQEYCPWNQCNRKL
        SNPVIIDQEYCPWNQCNRK+
Subjt:  SNPVIIDQEYCPWNQCNRKL

KAA0045594.1 exopolygalacturonase-like [Cucumis melo var. makuwa]7.3e-8555.31Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++L +LL     +KAQ ++G VFDITK GAKPN DVT                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI
             + + YVD         +  Q   GW  +   L  +   L  NL+ NF+ NSIVKDITSLDSKN+HINLLGCKNLTFDH+TITAP NSPNTDGIH+
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI

Query:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV
          SEQINI+NT IATGDDC+SVG TNKQ+ IS+VTCGPGHGI+IGSLGKY  E+ V GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVNV
Subjt:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV

Query:  SNPVIIDQEYCPWNQCNRKL
        SNPVIIDQEYCPWNQCNRK+
Subjt:  SNPVIIDQEYCPWNQCNRKL

KAA0045608.1 exopolygalacturonase-like [Cucumis melo var. makuwa]8.6e-8655.62Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++LP+LL     +KAQ ++G VFDITK GAKPN DVT                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI
             + + YVD         +  Q   GW  +   L  +   L  NL+ NF+ NSIVKDITSLDSKN+HINLLGCKNLTFDH+TITAP NSPNTDGIH+
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI

Query:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV
          SEQINI+NT IATGDDC+SVG TNKQ+ IS+VTCGPGHGI+IGSLGKY  E+ V GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVNV
Subjt:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV

Query:  SNPVIIDQEYCPWNQCNRKL
        SNPVIIDQEYCPWNQCNRK+
Subjt:  SNPVIIDQEYCPWNQCNRKL

TYJ96129.1 Exopolygalacturonase [Cucumis melo var. makuwa]1.6e-8454.83Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++LP+LL     +KAQ  AG VFDITK GAKPN D+T                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVD---WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIH
             + + YVD         +  Q    W  +      + TK+ M NL+FNF+ NSIVKDITSLDSKN+H NLL CKNLTFDH+TITAP NSPNTDGIH
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVD---WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIH

Query:  IGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVN
        +G SEQINI+NT IATGDDC+SVG +NKQI IS+VTCGPGHGI+IGSLGKY  E+ + GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVN
Subjt:  IGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVN

Query:  VSNPVIIDQEYCPWNQCNRKL
        VSNPV+IDQEYCPWNQCNRK+
Subjt:  VSNPVIIDQEYCPWNQCNRKL

XP_008449696.2 PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo]1.2e-8454.83Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++LP+LL     +KAQ  AG VFDITK GAKPN D+T                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVD---WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIH
             + + YVD         +  Q    W  +      + TK+ M NL+FNF+ NSIVKDITSLDSKN+H NLL CKNLTFDH+TITAP NSPNTDGIH
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVD---WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIH

Query:  IGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVN
        +G SEQINI+NT IATGDDC+SVG +NKQI IS+VTCGPGHGI+IGSLGKY  E+ + GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVN
Subjt:  IGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVN

Query:  VSNPVIIDQEYCPWNQCNRKL
        VSNPV+IDQEYCPWNQCNRK+
Subjt:  VSNPVIIDQEYCPWNQCNRKL

TrEMBL top hitse value%identityAlignment
A0A0A0K6J6 Uncharacterized protein6.8e-8967.32Show/hide
Query:  MSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTTVSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKVLMTNLRFNFINNSIVKDITSLDSKN
        +++LP  L  A   +AQ    ++FD+T+ GAKPN D+T     +  S  + +   IRAQ D+  L+D  T PT V  TNL+F+FI NSIVKDITSLDSKN
Subjt:  MSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTTVSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKVLMTNLRFNFINNSIVKDITSLDSKN

Query:  FHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLIS
        FHINLLGCKN+TF H+TI+APENSPNTDGIHI  SEQINI++++I+TGDDCVSVG +NKQ+TI+NVTCGPGHGI++GSLGKY  E+ V GVTVK CKLI+
Subjt:  FHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLIS

Query:  TTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKLNF
        TTNGVRIK+WPDSA A+  SD+HFEDIEM NVSNPVIIDQEYCPWNQCNRKLNF
Subjt:  TTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKLNF

A0A0A0LX75 Uncharacterized protein1.9e-8664.37Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTA-GAVFDITKSGAKPNDDVTTVSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKVLMTNLRFNFINNSIVKD
        MGLR NF+++LPL L     AK Q  A G VFD+T  GAKPN D+T V                                       L+ NFI NSIVKD
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTA-GAVFDITKSGAKPNDDVTTVSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKVLMTNLRFNFINNSIVKD

Query:  ITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVT
        ITSLDSKN+HINLLGCKNLTFDH+TITAPENSPNTDGIH+  SEQINI+NT IATGDDC+SVG TNKQI IS+VTCGPGHGI+IGSLGKY  E+ V GVT
Subjt:  ITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVT

Query:  VKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKLN
        VK CKL STTNGVRIK+WPDS   +P +D+HFEDIEM NVSNP+IIDQEYCPWNQCNRK N
Subjt:  VKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKLN

A0A5A7TR51 Exopolygalacturonase-like3.5e-8555.31Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++L +LL     +KAQ ++G VFDITK GAKPN DVT                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI
             + + YVD         +  Q   GW  +   L  +   L  NL+ NF+ NSIVKDITSLDSKN+HINLLGCKNLTFDH+TITAP NSPNTDGIH+
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI

Query:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV
          SEQINI+NT IATGDDC+SVG TNKQ+ IS+VTCGPGHGI+IGSLGKY  E+ V GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVNV
Subjt:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV

Query:  SNPVIIDQEYCPWNQCNRKL
        SNPVIIDQEYCPWNQCNRK+
Subjt:  SNPVIIDQEYCPWNQCNRKL

A0A5A7TRZ0 Exopolygalacturonase-like4.2e-8655.62Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++LP+LL     +KAQ ++G VFDITK GAKPN DVT                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI
             + + YVD         +  Q   GW  +   L  +   L  NL+ NF+ NSIVKDITSLDSKN+HINLLGCKNLTFDH+TITAP NSPNTDGIH+
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI

Query:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV
          SEQINI+NT IATGDDC+SVG TNKQ+ IS+VTCGPGHGI+IGSLGKY  E+ V GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVNV
Subjt:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV

Query:  SNPVIIDQEYCPWNQCNRKL
        SNPVIIDQEYCPWNQCNRK+
Subjt:  SNPVIIDQEYCPWNQCNRKL

A0A5D3DYI3 Exopolygalacturonase-like3.2e-8655.62Show/hide
Query:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------
        MGL  NF+++LP+LL     +KAQ ++G+VFDITK GAKPN DVT                                                       
Subjt:  MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTT------------------------------------------------------

Query:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI
             + + YVD         +  Q   GW  +   L  +   L  NL+ NF+ NSIVKDITSLDSKN+HINLLGCKNLTFDH+TITAP NSPNTDGIH+
Subjt:  -----VSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKV--LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHI

Query:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV
          SEQINI+NT IATGDDC+SVG TNKQ+ IS+VTCGPGHGI+IGSLGKY  E+ V GVTVK CKL  TTNGVRIK+WPDSAVA+P SD+HFEDIEMVNV
Subjt:  GHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNV

Query:  SNPVIIDQEYCPWNQCNRKL
        SNPVIIDQEYCPWNQCNRK+
Subjt:  SNPVIIDQEYCPWNQCNRKL

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)4.2e-5956.98Show/hide
Query:  KVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHG
        K L  NLR   + NSI++D+T+LDSKNFH+N++GCKNLTF+   I+A E S NTDGIHIG S+ +NI+NT+I TGDDC+S+G  +K I I+N+TCGPGHG
Subjt:  KVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHG

Query:  IAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKL
        I++GSLG+YK EE+V G+ VKNC +  + NGVRIK+WP S      S++HF+DI M +V  P++IDQ YCP+NQC  ++
Subjt:  IAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKL

P35337 Polygalacturonase4.9e-6056.35Show/hide
Query:  TLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCG
        T   K L  ++RF+F++N+ +KD+TSLD+KNFH N++  KN+TFD++ I AP  SPNTDGIH+G  E + I+NT+IATGDDC+SVG   K + I  V CG
Subjt:  TLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCG

Query:  PGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNR
        PGHGI++GSLG+Y  E+ V  +TVKNC L  T+NG+RIK+WP +A     + +HFEDI +  VSNP++IDQEYCPWNQCN+
Subjt:  PGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNR

Q39766 Polygalacturonase2.7e-5856Show/hide
Query:  LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIA
        L  N+RF+F+ N++++DITS DSK FHIN+  CKN+T + L I AP+ SPNTDGIH+G SE +NI+ + I TGDDC+S+G   K + I  +TCGPGHGI+
Subjt:  LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIA

Query:  IGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNR
        IGSLGK++ EE VEG+ + NC + +T+NG RIK+WP       VS++HFEDI M NVS+P++IDQ+YCPWN+C +
Subjt:  IGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNR

Q39786 Polygalacturonase3.5e-5856Show/hide
Query:  LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIA
        L  N+RF+F+ N++++DITS DSK FHIN+  CKN+T + L I AP+ SPNTDGIH+G SE +NI+ + I TGDDC+S+G   K + I  +TCGPGHGI+
Subjt:  LMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIA

Query:  IGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNR
        IGSLGK++ EE VEG+ + NC + +T+NG RIK+WP       VS++HFEDI M NVS+P++IDQ+YCPWN+C +
Subjt:  IGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNR

Q40312 Polygalacturonase3.8e-6865.92Show/hide
Query:  TKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGH
        +KV M N  FNF+NNSIV+ +TS DSKNFH+ + GCKN+TFD  TITAP +SPNTDGIH+G S  + I+NT I TGDDCVS+G  +KQIT+  V CGPGH
Subjt:  TKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGH

Query:  GIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK
        G+++GSLGK+ TEE VEG+TVKNC L +T NGVRIK+WPD+     VSD+HFEDI M NV NPVIIDQEY PWNQC++K
Subjt:  GIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein5.4e-6253.85Show/hide
Query:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY
        + +  W V+    T   K L  ++RF+FI NS ++DI+S+D+KNFHIN+LG KN+T +++ I APE+SPNTDGIH+G S+ + I+N+ I+TGDDC+SVG 
Subjt:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY

Query:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK
          K + +  VTCGPGHGI++GSLG+Y  E+ V G+ V NC L  T NG+RIK+WP +A +   SD+HFEDI + +VSNP++IDQEYCPWNQCN++
Subjt:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK

AT3G07830.1 Pectin lyase-like superfamily protein1.0e-6052.31Show/hide
Query:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY
        + +  W V+    T   K L  ++RF+F+ N+ ++DI+S+D+KNFHIN++G KN+TFD++ I AP  SPNTDGIH+G S  ++I+N++I+TGDDCVSVG 
Subjt:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY

Query:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK
            + + NV CGPGHGI++GSLG+Y  E+ V G+ V NC L  T NG+RIK+WP +A +   S++HFE+I + NVSNP++IDQEYCPWNQCN++
Subjt:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK

AT3G07840.1 Pectin lyase-like superfamily protein2.9e-6354.36Show/hide
Query:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY
        + +  W V+    T   K L  ++RF+F+ N+ ++DI+S+D+KNFHIN+LG KN+TFD++ + AP  SPNTDGIH+G SE + I+N++IATGDDC+SVG 
Subjt:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY

Query:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK
          K + + NV CGPGHGI++GSLG+Y  E+ V G+TV NC L  T NG+RIK+WP +A A   S +HFE+I + NVSNP++IDQEYCPWNQCN++
Subjt:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK

AT4G18180.1 Pectin lyase-like superfamily protein1.6e-5051.43Show/hide
Query:  KVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHG
        K+L T+L+F  +N ++V+ I+S++SK FHI L+ C++     L ITAP +SPNTDGIHI  S  +    + IATGDDCVS+G  N QITI+++ CGPGHG
Subjt:  KVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHG

Query:  IAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQC
        I++GSLG+Y  E+ V G+ VK+CK+  TTNG+RIK+W +S      +++ FE+I M NV+NP+IIDQ YCP++ C
Subjt:  IAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQC

AT5G48140.1 Pectin lyase-like superfamily protein1.3e-6053.33Show/hide
Query:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY
        + +  W V+    T   K L  ++RF+F+ ++ ++ ITSLD+K+FHIN++G KN+TF+ + I AP  SPNTDGIH+G S+ I I+N+ I+TGDDCVSVG 
Subjt:  QSDRGWLVD--WSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHINLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGY

Query:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK
          K + +  VTCGPGHGI+IGSLG+Y  EE V G+ + NC L  T NG+RIK+WP +A     SD+HFE+I + NVSNP++IDQEYCPWNQCN++
Subjt:  TNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDSAVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGAGACTAAACTTTATGTCAATACTACCTTTGTTATTATCGTTTGCATATATTGCTAAAGCCCAATACACAGCTGGTGCAGTATTTGATATCACTAAATCTGG
CGCCAAACCTAATGATGATGTTACTACGGTTAGTATCTACTATGTTGATTCCAAAAGGAGTTTACAAATTAAAAGAATCCGAGCTCAAAGTGATAGAGGATGGTTGGTCG
ACTGGAGCACTCTACCTACCAAAGTTCTCATGACAAATTTGAGATTTAATTTCATCAACAATTCAATTGTGAAGGACATAACTTCATTGGATAGTAAAAATTTCCATATC
AATCTTTTGGGTTGCAAAAATCTTACTTTTGATCACTTGACAATTACTGCACCAGAGAATAGCCCCAATACTGATGGAATTCATATTGGACATTCGGAGCAGATTAATAT
TATGAATACACAAATTGCAACCGGAGATGATTGTGTGTCTGTAGGGTATACTAACAAACAAATAACTATTAGTAATGTCACTTGTGGACCAGGACATGGAATTGCCATCG
GAAGCTTGGGCAAATACAAGACTGAAGAAACTGTGGAAGGAGTTACCGTGAAAAATTGCAAATTAATCAGTACTACGAATGGTGTCCGAATTAAATCATGGCCAGATTCA
GCCGTCGCATACCCAGTCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAATCAATGCAACCG
AAAGTTGAACTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGAGACTAAACTTTATGTCAATACTACCTTTGTTATTATCGTTTGCATATATTGCTAAAGCCCAATACACAGCTGGTGCAGTATTTGATATCACTAAATCTGG
CGCCAAACCTAATGATGATGTTACTACGGTTAGTATCTACTATGTTGATTCCAAAAGGAGTTTACAAATTAAAAGAATCCGAGCTCAAAGTGATAGAGGATGGTTGGTCG
ACTGGAGCACTCTACCTACCAAAGTTCTCATGACAAATTTGAGATTTAATTTCATCAACAATTCAATTGTGAAGGACATAACTTCATTGGATAGTAAAAATTTCCATATC
AATCTTTTGGGTTGCAAAAATCTTACTTTTGATCACTTGACAATTACTGCACCAGAGAATAGCCCCAATACTGATGGAATTCATATTGGACATTCGGAGCAGATTAATAT
TATGAATACACAAATTGCAACCGGAGATGATTGTGTGTCTGTAGGGTATACTAACAAACAAATAACTATTAGTAATGTCACTTGTGGACCAGGACATGGAATTGCCATCG
GAAGCTTGGGCAAATACAAGACTGAAGAAACTGTGGAAGGAGTTACCGTGAAAAATTGCAAATTAATCAGTACTACGAATGGTGTCCGAATTAAATCATGGCCAGATTCA
GCCGTCGCATACCCAGTCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTCATTATAGACCAAGAATATTGTCCATGGAATCAATGCAACCG
AAAGTTGAACTTTTAA
Protein sequenceShow/hide protein sequence
MGLRLNFMSILPLLLSFAYIAKAQYTAGAVFDITKSGAKPNDDVTTVSIYYVDSKRSLQIKRIRAQSDRGWLVDWSTLPTKVLMTNLRFNFINNSIVKDITSLDSKNFHI
NLLGCKNLTFDHLTITAPENSPNTDGIHIGHSEQINIMNTQIATGDDCVSVGYTNKQITISNVTCGPGHGIAIGSLGKYKTEETVEGVTVKNCKLISTTNGVRIKSWPDS
AVAYPVSDLHFEDIEMVNVSNPVIIDQEYCPWNQCNRKLNF