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Sed0024035 (gene) of Chayote v1 genome

Gene IDSed0024035
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:1029798..1031673
RNA-Seq ExpressionSed0024035
SyntenySed0024035
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139307.1 uncharacterized protein LOC101220352 [Cucumis sativus]1.4e-3352.47Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT
        R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R +SF   TNH+SNHGG+  N S  +   +   VLW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LE+++P+HRR+P S+MVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

XP_008465549.1 PREDICTED: uncharacterized protein LOC103503177 isoform X2 [Cucumis melo]6.3e-3453.09Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT
        R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R +SF   TNH+SNHGG+  N S  +   +   VLW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

XP_016903413.1 PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo]3.1e-3352.2Show/hide
Query:  WMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT---
        W+    S  + + +  G   KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R +SF   TNH+SNHGG+  N S  +   +   VLW QT   
Subjt:  WMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT---

Query:  -------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                           SWYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Subjt:  -------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

XP_022999179.1 uncharacterized protein LOC111493640 [Cucurbita maxima]8.2e-3452.47Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT
        R++W    FS+ I  ++S   GTKPA  ISGNNLNSR+ SM DDFWSTS+CDLD+  TLQ R +SF   T+++SNHGG  ++    S   +  L+LW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LESKRP+HR +P SEMVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

XP_038889429.1 uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida]1.3e-3454.27Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGG----LYNFSVITSCSSSLVLWA
        R++W+    S+ I   +S   G KPA AISGNNLNSR+PSM DDFWSTS+CD DE  TLQ R +SF   TNH+SNHGG    L N S     +   VLW 
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGG----LYNFSVITSCSSSLVLWA

Query:  QT----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
        QT                      SWYMTKEL+LESK+P+HRR+P SEMVD LVEEWEEEGLYY
Subjt:  QT----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

TrEMBL top hitse value%identityAlignment
A0A0A0LFZ6 Uncharacterized protein6.8e-3452.47Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT
        R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R +SF   TNH+SNHGG+  N S  +   +   VLW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LE+++P+HRR+P S+MVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

A0A1S3CQL1 uncharacterized protein LOC103503177 isoform X23.0e-3453.09Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT
        R++W    FS+ I   +S     KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R +SF   TNH+SNHGG+  N S  +   +   VLW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

A0A1S4E5A2 uncharacterized protein LOC103503177 isoform X11.5e-3352.2Show/hide
Query:  WMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT---
        W+    S  + + +  G   KPA AISGNNLNSR+PSM +DFWSTS+CDLDE  TLQ R +SF   TNH+SNHGG+  N S  +   +   VLW QT   
Subjt:  WMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLY-NFSVITS-CSSSLVLWAQT---

Query:  -------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                           SWYMTKEL+LE+++P+HRR+P SEMVD LVEEWEEEGLYY
Subjt:  -------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

A0A6J1G589 uncharacterized protein LOC1114508509.8e-3351.85Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT
        R++W    FS+ I  ++S   GTK A  ISGNNLNSR+ SM DDFWSTS+CDLDE  TLQ R +SF   T+++ NHGG  ++    S   +  L+LW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LESKRP+HR +P SEMVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

A0A6J1KGB3 uncharacterized protein LOC1114936404.0e-3452.47Show/hide
Query:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT
        R++W    FS+ I  ++S   GTKPA  ISGNNLNSR+ SM DDFWSTS+CDLD+  TLQ R +SF   T+++SNHGG  ++    S   +  L+LW QT
Subjt:  RKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITS--CSSSLVLWAQT

Query:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY
                              SWYMTKEL+LESKRP+HR +P SEMVD LVEEWEEEGLYY
Subjt:  ----------------------SWYMTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15770.1 unknown protein6.5e-0530.71Show/hide
Query:  GTKPALAISGNNLNSRIPSM--PDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT--SWY----------------
        GTK  L +  +    R PS+   +DFW+ ++ D++ +        S   +T  S   G   N       +  LVLW QT   W                 
Subjt:  GTKPALAISGNNLNSRIPSM--PDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT--SWY----------------

Query:  ----MTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY
            +T E +L S + F R +P  EMV  LVE WEEEGLY
Subjt:  ----MTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY

AT3G15770.2 unknown protein6.5e-0530.71Show/hide
Query:  GTKPALAISGNNLNSRIPSM--PDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT--SWY----------------
        GTK  L +  +    R PS+   +DFW+ ++ D++ +        S   +T  S   G   N       +  LVLW QT   W                 
Subjt:  GTKPALAISGNNLNSRIPSM--PDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT--SWY----------------

Query:  ----MTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY
            +T E +L S + F R +P  EMV  LVE WEEEGLY
Subjt:  ----MTKELVLESKRPFHRRMPRSEMVDILVEEWEEEGLY

AT4G32342.1 unknown protein1.3e-0833.33Show/hide
Query:  DDFWSTSSCDLDESFTLQ-------YRPDSFFGITNHSSNHGGL------YNFSVITSCSSSLVLWAQTSWYMTKELVLESKRPFHRRMPRSEMVDILVE
        DDFWSTS+CD+D + T+Q       + P      +    NHG +        +    +    LV     SW  T + +L + + F + +P  EMV  LV+
Subjt:  DDFWSTSSCDLDESFTLQ-------YRPDSFFGITNHSSNHGGL------YNFSVITSCSSSLVLWAQTSWYMTKELVLESKRPFHRRMPRSEMVDILVE

Query:  EWEEEGLY
         WEEEGLY
Subjt:  EWEEEGLY

AT5G25360.1 unknown protein4.7e-1135Show/hide
Query:  PSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT---------------------SWYMTKELVLESKRPFHRR
        PS+ +DFWSTS+C++D S     R  S    TN++S      N +     +  L LW QT                     SW  T E +L   + F R 
Subjt:  PSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT---------------------SWYMTKELVLESKRPFHRR

Query:  MPRSEMVDILVEEWEEEGLY
        +P  EMVD LV+ WE+EGLY
Subjt:  MPRSEMVDILVEEWEEEGLY

AT5G25360.2 unknown protein4.7e-1135Show/hide
Query:  PSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT---------------------SWYMTKELVLESKRPFHRR
        PS+ +DFWSTS+C++D S     R  S    TN++S      N +     +  L LW QT                     SW  T E +L   + F R 
Subjt:  PSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQT---------------------SWYMTKELVLESKRPFHRR

Query:  MPRSEMVDILVEEWEEEGLY
        +P  EMVD LV+ WE+EGLY
Subjt:  MPRSEMVDILVEEWEEEGLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCGAGGACGAAAAACATGGATGGGGAATACATTTTCCATCGCCATACCCATTTATATCTCTTCTGGTTGGGGCACTAAGCCTGCACTTGCTATCTCTGGGAATAA
TCTGAATTCTAGGATCCCTAGCATGCCAGATGATTTTTGGAGTACAAGCTCGTGTGATCTCGATGAATCATTTACGCTTCAATATCGACCGGACTCATTTTTCGGCATAA
CAAACCACTCCTCTAACCATGGAGGCTTATATAACTTTAGTGTCATTACTTCCTGTTCCTCCAGTTTGGTTCTTTGGGCTCAGACCAGTTGGTATATGACTAAAGAACTC
GTGCTTGAAAGCAAACGACCTTTTCATCGGCGCATGCCCCGATCCGAAATGGTAGACATTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTATCGGGCCAGTCAATT
GAAAAAACGATCACCTTGTGCATACACCATGTTTACGACTTTTTCAGAGTTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCGAGGACGAAAAACATGGATGGGGAATACATTTTCCATCGCCATACCCATTTATATCTCTTCTGGTTGGGGCACTAAGCCTGCACTTGCTATCTCTGGGAATAA
TCTGAATTCTAGGATCCCTAGCATGCCAGATGATTTTTGGAGTACAAGCTCGTGTGATCTCGATGAATCATTTACGCTTCAATATCGACCGGACTCATTTTTCGGCATAA
CAAACCACTCCTCTAACCATGGAGGCTTATATAACTTTAGTGTCATTACTTCCTGTTCCTCCAGTTTGGTTCTTTGGGCTCAGACCAGTTGGTATATGACTAAAGAACTC
GTGCTTGAAAGCAAACGACCTTTTCATCGGCGCATGCCCCGATCCGAAATGGTAGACATTCTGGTAGAAGAATGGGAAGAAGAAGGGCTGTATTATCGGGCCAGTCAATT
GAAAAAACGATCACCTTGTGCATACACCATGTTTACGACTTTTTCAGAGTTGAATTAA
Protein sequenceShow/hide protein sequence
MGRGRKTWMGNTFSIAIPIYISSGWGTKPALAISGNNLNSRIPSMPDDFWSTSSCDLDESFTLQYRPDSFFGITNHSSNHGGLYNFSVITSCSSSLVLWAQTSWYMTKEL
VLESKRPFHRRMPRSEMVDILVEEWEEEGLYYRASQLKKRSPCAYTMFTTFSELN